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Journal articles

2026

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Yanti Ariyanti, Sarah Nila, Winati Nurhayu, Dimitri Dubois, Kanthi Arum Widayati, et al.. Perceptual Advantages of People Living in Semeru Volcanic Areas, Indonesia: An MRCV (Multiple Response Categorical Variable) Analysis. HAYATI Journal of Biosciences, 2026, 33 (3), pp.739-749. ⟨10.4308/hjb.33.3.739-749⟩. ⟨hal-05492915⟩
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Guilhem Desbrosses, Fabienne Cartieaux, Olivier Rodrigues, François Boutin, Aurore Vicet, et al.. Physical and Biological Measurements of Ethylene Emission Pinpoint the Importance of EIN4, EIN3 and EIL1 in the Regulation of Ethylene Biosynthesis in Arabidopsis Thaliana. Journal of Plant Growth Regulation, 2026, 45, pp.2422-2435. ⟨10.1007/s00344-025-12020-y⟩. ⟨hal-05516826⟩
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Dorian Kauffmann, Guillaume Gay, Julio Mateos-Langerak, Oriane Pourcelot, Virginie Georget, et al.. 2D Multimodal Image Collection for Fluorescence Prediction from Transmitted Light Microscopy. Scientific Data , 2026, Online ahead of print. ⟨10.1038/s41597-026-07004-w⟩. ⟨hal-05579341⟩
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Taismara Kustro Garnica, Ariadni Papadaki, Maria Georga, Guilhem Zeitoun, Joumana Jabado-Michaloud, et al.. Unraveling IGK locus in dog breeds: IMGT® new insights into canine immunogenetics. NAR Genomics and Bioinformatics, 2026, 8 (1), pp.lqag020. ⟨10.1093/nargab/lqag020⟩. ⟨hal-05523590⟩
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Laetitia Lesire, Rebecca Deprez-Poulain, Damien Bosc, Florence Leroux, Valerie Landry, et al.. Enhancing antitumour response to proteasome inhibitors with inhibitors of insulin‐degrading enzyme, a new molecular vulnerability in multiple myeloma. British Journal of Pharmacology, 2026, ⟨10.1111/bph.70407⟩. ⟨hal-05559143⟩
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Paul Marcoux, Fabien Gava, Marie Tosolini, Pauline Gravelle, Christina Schniederjohann, et al.. Patient-Derived Lymphoma Spheroids Reveal Predictive Markers of Glofitamab Resistance in Relapsed/Refractory B-NHL. Blood, 2026, ⟨10.1182/blood.2025031309⟩. ⟨hal-05549327⟩
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Kohei Nagao, Kazufumi Mochizuki. Linking Germline Telomere Removal to Global Programmed DNA Elimination in Tetrahymena Genome Differentiation. eLife, 2026, ⟨10.7554/eLife.109351.1⟩. ⟨hal-05390527⟩
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Flora Paldi, Michael-Florian Szalay, Solène Dufau, Marco Di Stefano, Hadrien Reboul, et al.. Transient histone deacetylase inhibition induces cellular memory of gene expression and 3D genome folding. Nature Genetics, 2026, 58 (2), pp.404-417. ⟨10.1038/s41588-025-02489-4⟩. ⟨hal-05569730⟩
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Manon Philippe, Soha Salloum, Floric Slimani, Davide Normanno, Isabelle Barbosa, et al.. Co-translational determination of quaternary structures in chaperone factories. Nature Communications, 2026, 17 (1), pp.1978. ⟨10.1038/s41467-026-68687-8⟩. ⟨hal-05482009v2⟩
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Gaoussou Sanou, Taciana Manso, Konstantin Todorov, Véronique Giudicelli, Patrice Duroux, et al.. Therapeutic monoclonal antibodies repurposing in oncology via IMGT/mAb-KG embeddings. BMC Medical Informatics and Decision Making, 2026, ⟨10.1186/s12911-026-03394-4⟩. ⟨hal-05559598⟩
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Journal articles

2025

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Fatima Alhourani, Marine Tauziet, Margaux Ayeul, Pierre Dambrun, Hiba Daher, et al.. Targeting SUV4-20H Epigenetic Enzymes Enhances Topoisomerase II Poisoning in Prostate Cancer. Cancer Research, 2025, Online ahead of print. ⟨10.1158/0008-5472.CAN-24-3974⟩. ⟨hal-05354376⟩
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Morgane Auboiron, Jocelyn Coiffard, Sylvain Kumanski, Olivier Santt, Benjamin Pardo, et al.. A CRISPR ‐Cas9‐based system for the dose‐dependent study of DNA double‐strand break sensing and repair. FEBS Journal, In press, ⟨10.1111/febs.70143⟩. ⟨hal-05155786⟩
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Patricia Balaresque, Sébastien Delmotte, Franklin Delehelle, Andreia Moreira, Nancy Saenz-Oyhéréguy, et al.. Sex and environment shape cochlear sensitivity in human populations worldwide. Scientific Reports, 2025, 15 (1), pp.10475. ⟨10.1038/s41598-025-92763-6⟩. ⟨mnhn-05099274⟩
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Debora Bencivenga, Emanuela Stampone, Jahanzaib Azhar, Daniela Parente, Waqar Ali, et al.. p27Kip1 and tumors: characterization of CDKN1B variants identified in MEN4 and breast cancer. Cells, 2025, 14 (3), pp.188. ⟨10.3390/cells14030188⟩. ⟨hal-05523518⟩
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Sami Bizzari, Cybel Mehawej, Eliane Chouery, Pratibha Nair, Sandra Corbani, et al.. Blended Phenotypes in Siblings: Dual Diagnoses of Nicolaides-Baraitser and Craniosynostosis Syndromes. Molecular Syndromology, 2025, pp.1-9. ⟨10.1159/000549014⟩. ⟨hal-05468386⟩
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Thomas Bonte, Oriane Pourcelot, Adham Safieddine, Floric Slimani, Florian Mueller, et al.. A deep learning approach for time-consistent cell cycle phase prediction from microscopy data. PLoS Computational Biology, 2025, 21 (12), pp.e1013800. ⟨10.1371/journal.pcbi.1013800⟩. ⟨hal-05458920v2⟩
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Callum Burnard, Alban Mancheron, William Ritchie. Generating realistic artificial human genomes using adversarial autoencoders. NAR Genomics and Bioinformatics, 2025, 7 (3), pp.lqaf101. ⟨10.1093/nargab/lqaf101⟩. ⟨lirmm-05190346⟩
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Marine Cahen, Jenny Leonard, Ophélie Dézé, Laurent Deleurme, Maïwenn Pineau, et al.. Editing B cells at the IGHA2 gene position provides alternative route to therapeutic IgA production. Mucosal Immunology, 2025, 18 (5), pp.1027-1035. ⟨10.1016/j.mucimm.2025.06.001⟩. ⟨hal-05163114⟩
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Xia Cai, Yike Liu, Jialuo Li, Zhuoran Zhao, Xinyu Yao, et al.. Transposon targeting non-coding RNA transcription targets G/C-rich tracts and is facilitated by an intrinsically disordered protein in Tetrahymena. Bioarxiv, 2025, ⟨10.1101/2025.10.09.681302⟩. ⟨hal-05390537⟩
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Xia Cai, Zhihao Zhai, Tomoko Noto, Gang Dong, Xue Wang, et al.. A specialized TFIIB is required for transcription of transposon-targeting noncoding RNAs. Nucleic Acids Research, 2025, 53 (9), ⟨10.1093/nar/gkaf427⟩. ⟨hal-05390560⟩
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Margot Celerie, Andrew Oldfield, William Ritchie. SeqManager: A Web-Based Tool for Efficient Sequencing Data Storage Management and Duplicate Detection. Bioinformatics Advances, 2025, ⟨10.1093/bioadv/vbaf282⟩. ⟨hal-05380397⟩
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Roman M Chabanon, Liudmila Shcherbakova, Magali Lacroix-Triki, Marine Aglave, Jean Zeghondy, et al.. Autocrine interferon poisoning mediates ADAR1-dependent synthetic lethality in BRCA1/2-mutant cancers. Nature Communications, 2025, 16 (1), pp.6972. ⟨10.1038/s41467-025-62309-5⟩. ⟨hal-05378533⟩
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Christophe Chapard, Nathalie Bastié, Axel Cournac, Laura Chaptal, Henri Mboumba, et al.. RNA Pol II-based regulations of chromosome folding. Cell Genomics, 2025, ⟨10.1016/j.xgen.2025.100970⟩. ⟨hal-05121450⟩
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Djamila Chemlal, Camille Pochard, Valentin Jacquier, Angélique Bruyer, Ludovic Gabellier, et al.. CD200 immune checkpoint expression is associated with inferior outcome in multiple myeloma patients treated with anti-CD38 monoclonal antibodies. OncoImmunology, 2025, 14 (1), pp.2532226. ⟨10.1080/2162402X.2025.2532226⟩. ⟨hal-05527272⟩
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Salvatrice Ciccarese, Marie-Paule Lefranc, Giulia C M Perrone, Pietro D’addabbo, Ciro Leonardo Pierri. Three-dimensional modeling of Camelus dromedarius T cell receptor Gamma (TRG)_Delta (TRD)/CD1D complex reveals different binding interactions depending on the TRD CDR3 length. Antibodies, 2025, 14 (2), pp.46. ⟨10.3390/antib14020046⟩. ⟨hal-05523866⟩
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Julien A Clain, Morgane Picard, Henintsoa Rabezanahary, Sonia André, Steven Boutrais, et al.. Immune alterations and viral reservoir atlas in SIV-infected chinese rhesus macaques. Infectious Disease Reports, 2025, 17 (1), pp.12. ⟨10.3390/idr17010012⟩. ⟨hal-05521142⟩
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Flavie Coquel, Sing-Zong Ho, Keng-Chang Tsai, Chun-Yen Yang, Antoine Aze, et al.. Synergistic effect of inhibiting CHK2 and DNA replication on cancer cell growth. eLife, 2025, 13, pp.RP104718. ⟨10.7554/eLife.104718⟩. ⟨hal-05378520⟩
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Rosa Milagros Corrales, Jeremy Vincent, Lucien Crobu, Rachel Neish, Binita Nepal, et al.. Tubulin detyrosination shapes Leishmania cytoskeletal architecture and virulence. Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (3), pp.e2415296122. ⟨10.1073/pnas.2415296122⟩. ⟨hal-05351407⟩
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Myriam Croze, Alice Paladin, Stefania Zingale, Sofia Alemanno, Franco Nicolis, et al.. Genomic diversity and structure of prehistoric alpine individuals from the Tyrolean Iceman’s territory. Nature Communications, 2025, 16 (1), pp.6431. ⟨10.1038/s41467-025-61601-8⟩. ⟨hal-05521022⟩
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Pauline de Sousa, Hervé Seitz. Prix Nobel de physiologie ou de médecine 2024 : Gary Ruvkun et Victor Ambros. Médecine/Sciences, 2025, 41 (2), pp.180-185. ⟨10.1051/medsci/2025012⟩. ⟨hal-05083438⟩
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Sandrine Denaud, Gonzalo Sabarís, Marco Di Stefano, Giorgio-Lucio Papadopoulos, Bernd Schuettengruber, et al.. Determining the functional relationship between epigenetic and physical chromatin domains in Drosophila. Genome Biology, 2025, 26 (1), pp.116. ⟨10.1186/s13059-025-03587-6⟩. ⟨hal-05313571⟩
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Axelle Donjon, Charlene Boumendil. Using LEXY and LINuS Optogenetics Tools and Automated Image Analysis to Quantify Nucleocytoplasmic Transport Dynamics in Live Cells. Journal of visualized experiments : JoVE, 2025, 221, ⟨10.3791/68585⟩. ⟨hal-05384041⟩
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Joey Dufourd, Thi Hai Yen Huynh, Sandrine Sauzet, Quynh Huong Lai, Francesco Abagnale, et al.. TELS1 stabilizes t-loops independently of TRF2 and controls telomere length in pluripotent cells. Cell Reports, 2025, 44 (9), pp.116260. ⟨10.1016/j.celrep.2025.116260⟩. ⟨hal-05360233⟩
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Laure Dutrieux, Sara Ovejero, Antoine Guillemin, Miss Leriem Zellagui, Elke de Bruyne, et al.. Targeting transcription-replication conflicts using G-quadruplexes stabilizers in multiple myeloma. Blood Neoplasia, 2025, 2 (2), pp.100072. ⟨10.1016/j.bneo.2025.100072⟩. ⟨hal-05343640⟩
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Anthony Feral, Guillaume Marcellin, Yoann Lannay, Camille Hennebert, Yazid Souf, et al.. Development of Low-Nanomolar Covalent Epoxide Inhibitors of Tubulin Detyrosinating Enzymes VASH1&2. Journal of Medicinal Chemistry, 2025, 68 (17), pp.18335-18355. ⟨10.1021/acs.jmedchem.5c00980⟩. ⟨hal-05328434⟩
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Anna-Sophie Fiston-Lavier, Emira Cherif, Marie-Ka Tilak, Arnaud Soulier, Catherine Breton, et al.. Why and how to set up a Bioinformatics Learning Lab (BILL). PLoS Computational Biology, 2025, 21 (8), pp.e1013236. ⟨10.1371/journal.pcbi.1013236⟩. ⟨hal-05279437⟩
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Maximilian Fitz-James, Gonzalo Sabarís, Peter Sarkies, Frédéric Bantignies, Giacomo Cavalli. Interchromosomal contacts between regulatory regions trigger stable transgenerational epigenetic inheritance in Drosophila. Molecular Cell, 2025, 85 (4), pp.677-691.e6. ⟨10.1016/j.molcel.2024.11.021⟩. ⟨hal-05019382⟩
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Sandrine Gimenez, Emna Hamrouni, Sonia André, Morgane Picard, Calayselvy Soundaramourty, et al.. Monocytic reactive oxygen species–induced T-cell apoptosis impairs cellular immune response to SARS-CoV-2 mRNA vaccine. Journal of Allergy and Clinical Immunology, 2025, 155 (5), pp.1635-1646. ⟨10.1016/j.jaci.2025.01.003⟩. ⟨hal-05523727⟩
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Marion Haas, Sabrina Cherfa, Léa Nguyen, Maxence Bourgoin, Gersende Caron, et al.. PIM2 inhibition promotes MCL1 dependency in plasma cells involving integrated stress response-driven NOXA expression. Nature Communications, 2025, 16 (1), pp.256. ⟨10.1038/s41467-024-55572-5⟩. ⟨hal-04883435⟩
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Ali Haidar, Martine Simonelig, Anne Ramat. Visualization of mRNA Translation Within Germ Granule Biphasic Organization in Drosophila Early Embryo. Bio-protocol , 2025, 15 (1367), pp.e5242. ⟨10.21769/BioProtoc.5242⟩. ⟨hal-05081526⟩
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Sahar Hani, Caroline Mercier, Pascale David, Edouard Bertrand, Thierry Desnos, et al.. Live Single-Cell Transcriptional Dynamics in Plant Cells. Methods in Molecular Biology, 2025, Methods in Molecular Biology, 2875, pp.37-58. ⟨10.1007/978-1-0716-4248-1_4⟩. ⟨hal-05586289⟩
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Sahar Hani, Caroline Mercier, Pascale David, Edouard Bertrand, Thierry Desnos, et al.. Live Single-Cell Transcriptional Dynamics in Plant Cells. Chemical Reviews, 2025, Methods in Molecular Biology, 2875 (9), pp.37-58. ⟨10.1007/978-1-0716-4248-1_4⟩. ⟨hal-05074197⟩
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Charles Herbaux, E. Bachy, R. Bouabdallah, S. Guidez, O. Casasnovas, et al.. Atezolizumab, obinutuzumab and venetoclax for the treatment of patients with relapsed/refractory B non-Hodgkin lymphoma: Final analysis of a phase II trial from the LYSA group.. British Journal of Haematology, 2025, British Journal of Haematology, ⟨10.1111/bjh.20109⟩. ⟨hal-05096436⟩
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Hathaichanok Impheng, Ghislain Gillard, Nuttanid Numnoi, Anthony Feral, Matthieu Simon, et al.. Peptide-based covalent inhibitor of tubulin detyrosination promotes mesenchymal-to-epithelial transition in lung cancer cells. Proceedings of the National Academy of Sciences of the United States of America, 2025, 123, 123 (1), pp.e2514990123. ⟨10.1073/pnas.2514990123⟩. ⟨hal-05441335⟩
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Valentin Jacquier, Andréa Romero, Caroline Molinaro, Ritu Somayaji, Matthieu Abouladze, et al.. Development of a robust BH3 drug toolkit for precision medicine in hematologic malignancies. Theranostics, 2025, 15 (12), pp.5705-5718. ⟨10.7150/thno.107852⟩. ⟨hal-05521232⟩
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Cyprien Jahan, Lucie Bonnet-Madin, Shinichi Machida, Bijan Sobhian, Suzie Thenin-Houssier, et al.. Unintegrated HIV-1 DNA recruits cGAS via its histone-binding domain to escape innate immunity. Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (11), pp.e2424465122. ⟨10.1073/pnas.2424465122⟩. ⟨hal-05085506⟩
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Jennifer Jungfleisch, Neus Mestre-Farràs, Raúl Gómez-Riera, Oriane Pourcelot, Edouard Bertrand, et al.. eIF2A regulates cell migration in a translation-independent manner. Science Advances , 2025, 11 (31), ⟨10.1126/sciadv.adu5668⟩. ⟨hal-05382031⟩
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Felipe Leon-Diaz, Célia Chamontin, Sébastien Lainé, Marius Socol, Edouard Bertrand, et al.. Translation of unspliced retroviral genomic RNA in the host cell is regulated in both space and time. Journal of Cell Biology, 2025, 224 (4), ⟨10.1083/jcb.202405075⟩. ⟨hal-04938312⟩
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Francesca Lorenzini, Johanna Marines, Julien Le Friec, Nam Do Khoa, Maria Angela Nieto, et al.. Melanoma innervation, noradrenaline and cancer progression in zebrafish xenograft model. Cell Death Discovery, 2025, 11 (1), pp.260. ⟨10.1038/s41420-025-02523-8⟩. ⟨hal-05530009⟩
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Ian Magill, Val Piekarsa, Sofia Kossida, Josh Croteau, Amy Lee, et al.. Genomic specificity of anti-mouse TCR mAbs determined by single-cell RNAseq. Journal of Immunology, 2025, 214 (9), pp.2202-2210. ⟨10.1093/jimmun/vkaf094⟩. ⟨hal-05304390⟩
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Taciana Manso, Gaoussou Sanou, Christos Nousias, Imene Maalem, François Boutin, et al.. Identification of engineered IMGT Fc variants in IMGT/mAb-DB, a database of therapeutic antibodies and fusion proteins. mAbs, 2025, 17 (1), pp.2594260. ⟨10.1080/19420862.2025.2594260⟩. ⟨hal-05420303⟩
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Anne-Marie Martinez, Giacomo Cavalli. A possible role for epigenetics in cancer initiation. Comptes Rendus. Biologies, 2025, 348 (G1), pp.43-53. ⟨10.5802/crbiol.171⟩. ⟨hal-05075889⟩
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Cybel Mehawej, Eliane Chouery, Roula Farah, Alia Khalil, Setrida El Hachem, et al.. Endophilin A2 Deficiency Impairs Antibody Production in Humans. Journal of Clinical Immunology, 2025, 45 (1), pp.37. ⟨10.1007/s10875-024-01827-1⟩. ⟨hal-05264579⟩
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Laura Morano, Nadia Vie, Adam Aissanou, Dana Hodroj, Véronique Garambois, et al.. Shining light on drug discovery: optogenetic screening for TopBP1 biomolecular condensate inhibitors. NAR Cancer, 2025, 7 (4), pp.zcaf041. ⟨10.1093/narcan/zcaf041⟩. ⟨hal-05434023⟩
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Catharina Muylaert, Lien Ann van Hemelrijck, Arne van der Vreken, Robbe Heestermans, Hatice Satilmis, et al.. The de novo DNA methyltransferase 3B is a novel epigenetic regulator of MYC in multiple myeloma, representing a promising therapeutic target to counter relapse. Journal of experimental & clinical cancer research, 2025, 44 (1), pp.125. ⟨10.1186/s13046-025-03382-y⟩. ⟨hal-05523791⟩
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Julie Noguerol, Karl Laviolette, Margot Zahm, Adeline Chaubet, Ambrine Sahal, et al.. Heterochromatic gene silencing controls CD4+ T cell susceptibility to regulatory T cell-mediated suppression in a murine allograft model. Nature Communications, 2025, 16 (1), pp.566. ⟨10.1038/s41467-025-55848-4⟩. ⟨hal-04893300⟩
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Yoshiaki Nosaka, Masahiro Nagano, Yukihiro Yabuta, Baku Nakakita, So Nagaoka, et al.. Generation of germinal-vesicle oocytes from mouse embryonic stem cells under an ovarian soma-free condition. Developmental Cell, 2025, 60 (21), pp.2976-2994.e13. ⟨10.1016/j.devcel.2025.06.008⟩. ⟨hal-05399054⟩
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Sara Ovejero, Julie Devin, Laura Alibert, Camille Soun, Yea‐lih Lin, et al.. Synthetic Lethal Combinations of DNA Repair Inhibitors and Genotoxic Agents to Target High‐Risk Diffuse Large B Cell Lymphoma. Hematological Oncology, 2025, 43 (5), pp.e70131. ⟨10.1002/hon.70131⟩. ⟨hal-05515319⟩
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Sara Ovejero, Laura Alibert, Julie Devin, Tatiana Cañeque, Valentin Jacquier, et al.. Ironomycin induces mantle cell lymphoma cell death by targeting iron metabolism addiction. Theranostics, 2025, 15 (7), pp.2834-2851. ⟨10.7150/thno.101821⟩. ⟨hal-05343829⟩
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Ariadni Papadaki, Maria Georga, Joumana Jabado-Michaloud, Géraldine Folch, Guilhem Zeitoun, et al.. IMGT® analysis of the human IGH locus: unveiling novel polymorphisms and copy number variations in 15 genome assemblies from diverse ancestral backgrounds. NAR Genomics and Bioinformatics, 2025, 7 (3), pp.lqaf127. ⟨10.1093/nargab/lqaf127⟩. ⟨hal-05288863⟩
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Salomé Papereux, Ludovic Leconte, Cesar Augusto Valades-Cruz, Tianyan Liu, Julien Dumont, et al.. DeepCristae, a CNN for the restoration of mitochondria cristae in live microscopy images. Communications Biology, In press, 8 (1), pp.320. ⟨10.1038/s42003-025-07684-x⟩. ⟨hal-04295317v2⟩
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Yannick Perez, Fatima Alhourani, Julie Patouillard, Cyril Ribeyre, Marion Larroque, et al.. Cell-cycle dependent inhibition of BRCA1 signaling by the lysine methyltransferase SET8. Cell Cycle, 2025, 24 (1-4), pp.43-65. ⟨10.1080/15384101.2025.2508114⟩. ⟨hal-05354386⟩
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Patryk Poliński, Marta Miret Cuesta, Alfonsa Zamora-Moratalla, Federica Mantica, Gerard Cantero-Recasens, et al.. A highly conserved neuronal microexon in DAAM1 controls actin dynamics, RHOA/ROCK signaling, and memory formation. Nature Communications, 2025, 16 (1), pp.4210. ⟨10.1038/s41467-025-59430-w⟩. ⟨hal-05530164⟩
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Ovidiu Radulescu, Dima Grigoriev, Matthias Seiss, Maria Douaihy, Mounia Lagha, et al.. Identifying Markov Chain Models from Time-to-Event Data: An Algebraic Approach. Bulletin of Mathematical Biology, 2025, 87, pp.11. ⟨10.1007/s11538-024-01385-y⟩. ⟨hal-04958556⟩
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Marie Raynaud, Paola Sanna, Julien Joseph, Julie A. J. Clément, Yukiko Imai, et al.. PRDM9 drives the location and rapid evolution of recombination hotspots in salmonids fish. PLoS Biology, 2025, 23 (1), pp.e3002950. ⟨10.1371/journal.pbio.3002950⟩. ⟨hal-04880059⟩
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Gonzalo Sabarís, Bernd Schuettengruber, Giorgio Papadopoulos, Marta Coronado-Zamora, Maximilian Fitz-James, et al.. A mechanistic basis for genetic assimilation in natural fly populations. Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (11), ⟨10.1073/pnas.2415982122⟩. ⟨hal-05530368⟩
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Thomas Sabaté, Benoît Lelandais, Marie-Cécile Robert, Michael Szalay, Jean-Yves Tinevez, et al.. Uniform dynamics of cohesin-mediated loop extrusion in living human cells. Nature Genetics, 2025, 57 (12), pp.3152-3164. ⟨10.1038/s41588-025-02406-9⟩. ⟨hal-05527371⟩
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Hussein Sabit, Salma Abbas, Moataz T El-Safoury, Engy M Madkour, Sahar Mahmoud, et al.. Antibody–drug conjugates in breast cancer: navigating innovations, overcoming resistance, and shaping future therapies. Biomedicines, 2025, 13 (9), pp.2227. ⟨10.3390/biomedicines13092227⟩. ⟨hal-05528857⟩
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Adham Safieddine, Jonathan Bizarro, Soha Salloum, Hervé Le Hir, Edouard Bertrand. Polysome sorting controls mRNA localization and protein fate. Trends in Cell Biology, 2025, ⟨10.1016/j.tcb.2025.08.005⟩. ⟨hal-05371249⟩
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Gaoussou Sanou, Guilhem Zeitoun, Taciana Manso, Milad Eidi, Shamsa Batool, et al.. IMGT® at scale: FAIR, dynamic, and automated tools for immune locus analysis. Nucleic Acids Research, 2025, ⟨10.1093/nar/gkaf1024⟩. ⟨hal-05314861⟩
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Nazim Sarica, Laurent Janniere, Brian C Jester. Towards a Better Control of Engineered Circuit Transcription in Bacterial Genomes. Applied Microbiology, 2025, Exclusive Papers Collection of Editorial Board Members and Invited Scholars in Applied Microbiology (2023, 2024), 5 (1), pp.17. ⟨10.3390/applmicrobiol5010017⟩. ⟨hal-04939714⟩
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Ines Selmi, Manuela Texier, Marion Aguirrenbegoa, Clémentine Merce, Laurence Fraisse-Lepourry, et al.. The histone demethylase dLsd1 regulates organ size by silencing transposable elements. Communications Biology, 2025, 8 (1), pp.272. ⟨10.1038/s42003-025-07724-6⟩. ⟨hal-05373070⟩
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Matthieu Simon, Julien Espeut, François Juge, Muriel Amblard, Krzysztof Rogowski, et al.. Real‐time FRET assay for monitoring detyrosination by TMCP1 and VASH2. Protein Science, 2025, 34 (12), pp.e70374. ⟨10.1002/pro.70374⟩. ⟨hal-05381834⟩
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Anastasiia Skobelkina, Manon Julien, Sylvain Jeannin, Simona Miron, Tom Egger, et al.. KIF2C condensation concentrates PLK1 and phosphorylated BRCA2 on kinetochore microtubules in mitosis. Nucleic Acids Research, 2025, 53 (11), pp.gkaf476. ⟨10.1093/nar/gkaf476⟩. ⟨hal-05261422⟩
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Marina Srbic, Chaïmaa Belhaouari, Raoul Raffel, Laurine Lemaire, Jerome Barbier, et al.. NRDE2 Interacts with an Early Transcription Elongation Complex and Widely Impacts Gene Expression. International Journal of Molecular Sciences, 2025, 26 (17), pp.9792. ⟨10.3390/ijms26199792⟩. ⟨hal-05387834⟩
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Imene Tabet, Esin Orhan, Ermes Candiello, Lise Fenou, Carolina Velázquez, et al.. Replication-poison treatment in BRCA1-deficient breast cancer causes MRE11 over-resection that induces single-stranded DNA accumulation and Mitotic Catastrophe. Cancer Research, 2025, ⟨10.1158/0008-5472.CAN-24-1404⟩. ⟨hal-04931535⟩
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Hiroki Tanaka, Joao Diogo Dias, Basile Jay, Shunsuke Kita, Mina Sasaki, et al.. Structural basis of the hepatitis B virus X protein in complex with DDB1. Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (24), pp.e2421325122. ⟨10.1073/pnas.2421325122⟩. ⟨hal-05529964⟩
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Sylvain Tartier, Jihane Basbous, Séverine Boulon, Céline Verheggen, Edouard Bertrand. The purification of biomolecular condensates: Bottlenecks and strategies. Journal of Cell Biology, 2025, 224 (10), pp.e202504081. ⟨10.1083/jcb.202504081⟩. ⟨hal-05261427⟩
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Tommaso Villa, Oriane Pourcelot, David Dierks, Marion Faucourt, Cindy Burel, et al.. Chemical inhibition of exon junction complex assembly impairs mRNA localization and neural stem cells ciliogenesis. Nucleic Acids Research, 2025, 53 (51), pp.gkaf1200. ⟨10.1093/nar/gkaf1200⟩. ⟨hal-05376224⟩
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Evan Walsh, Kui Yang, Tammy Tollison, Sujatha Seenu, Nicole Adams, et al.. Development of ferret immune repertoire reference resources and single-cell-based high-throughput profiling assays. Journal of Virology, 2025, 99 (4), pp.00181-25. ⟨10.1128/jvi.00181-25⟩. ⟨hal-05192529⟩
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Mehwish Younas, Sandrine Gimenez, Yea-Lih Lin, Clément Mettling, Domenico Maiorano, et al.. γ-Aminobutyric Acid-Induced Monocytic Reactive Oxygen Species Impair CD4 Restoration in Treated Adults With HIV-1. Journal of Infectious Diseases, In press, pp.jiaf058. ⟨10.1093/infdis/jiaf058⟩. ⟨hal-05057438⟩
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Hao Zhou, Chimari Jiko, Christoph Gerle, Marie-Paule Lefranc, Kazutaka Katoh, et al.. From benchmarking alignment of genome assemblies to IMGT annotation: the paradigm of the bovine Bos taurus T cell receptor (TRG) locus. BMC Genomics, 2025, 26, pp.809. ⟨10.1186/s12864-025-12081-z⟩. ⟨hal-05474433⟩
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Journal articles

2024

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Claire Abeza, Philipp Busse, Ana C.F. Paiva, Marie-Eve Chagot, Justine Schneider, et al.. The HSP90/R2TP quaternary chaperone scaffolds assembly of the TSC complex. Journal of Molecular Biology, 2024, 436 (23), pp.168840. ⟨10.1016/j.jmb.2024.168840⟩. ⟨hal-04765861⟩
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Nazli Akilli, Thierry Cheutin, Giacomo Cavalli. Phase separation and inheritance of repressive chromatin domains. Current Opinion in Genetics and Development, 2024, 86, pp.20423 - 20429. ⟨10.1016/j.gde.2024.102201⟩. ⟨hal-04797666⟩
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Hugo Alarcan, Clément Bruno, Patrick Emond, Cédric Raoul, Patrick Vourc’h, et al.. Pharmacometabolomics applied to low-dose interleukin-2 treatment in amyotrophic lateral sclerosis. Annals of the New York Academy of Sciences, 2024, 1536 (1), pp.82-91. ⟨10.1111/nyas.15147⟩. ⟨hal-04767126⟩
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Elina Alaterre, Sara Ovejero, Caroline Bret, Laure Dutrieux, Dassou Sika, et al.. Integrative single-cell chromatin and transcriptome analysis of human plasma cell differentiation. Blood, 2024, 144 (5), pp.496-509. ⟨10.1182/blood.2023023237⟩. ⟨hal-04701434⟩
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Antoine Aze, James Hutchins, Domenico Maiorano. Studying Translesion DNA Synthesis Using Xenopus In Vitro Systems. Methods in Molecular Biology, 2024, Methods in Molecular Biology, 2740, pp.21-36. ⟨10.1007/978-1-0716-3557-5_2⟩. ⟨inserm-04620024⟩
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Bethany Bartlett, Yatendra Kumar, Shelagh Boyle, Tamoghna Chowdhury, Andrea Quintanilla, et al.. TPR is required for cytoplasmic chromatin fragment formation during senescence. eLife, 2024, 13, pp.e101702. ⟨10.7554/eLife.101702⟩. ⟨hal-04855872⟩
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Maëlle Bellec, Ruoyu Chen, Jana Dhayni, Antonello Trullo, Damien Avinens, et al.. Boosting the toolbox for live imaging of translation. RNA, 2024, 30 (10), pp.1374-1394. ⟨10.1261/rna.080140.124⟩. ⟨hal-04730222⟩
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Mathilde Biot, Attila Tóth, Christine Brun, Leon Guichard, Bernard de Massy, et al.. Principles of chromosome organization for meiotic recombination. Molecular Cell, 2024, 84 (10), pp.1826-1841. ⟨10.1016/j.molcel.2024.04.001⟩. ⟨hal-04771913⟩
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Brigitte Boizet-Bonhoure, Stéphanie Déjardin, Mélissa Girard, Quentin Durix, Francis Poulat, et al.. Adenomyotic Lesions Are Induced in the Mouse Uterus after Exposure to NSAID and EE2 Mixtures at Environmental Doses. International Journal of Molecular Sciences, 2024, 25 (4), pp.2003. ⟨10.3390/ijms25042003⟩. ⟨hal-04701758⟩
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Caroline Bret, Fabienne Desmots-Loyer, Jérôme Moreaux, Thierry Fest. BHLHE41, a transcriptional repressor involved in physiological processes and tumor development. Cellular Oncology, 2024, 48, pp.43-66. ⟨10.1007/s13402-024-00973-3⟩. ⟨hal-04704590⟩
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Isabelle Busseau, Sophie Mockly, Élisabeth Houbron, Hedi Somaï, Hervé Seitz. Evaluation of microRNA variant maturation prior to genome edition. Biochimie, 2024, 217, pp.86-94. ⟨10.1016/j.biochi.2023.06.007⟩. ⟨hal-04661180⟩
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Sebastian Canzler, Kristin Schubert, Ulrike E Rolle-Kampczyk, Zhipeng Wang, Stephan Schreiber, et al.. Evaluating the performance of multi-omics integration: a thyroid toxicity case study. Archives of Toxicology, 2024, 99 (1), pp.309-332. ⟨10.1007/s00204-024-03876-2⟩. ⟨hal-04920938⟩
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Renaud Cezar, Lucy Kundura, Sonia André, Claire Lozano, Thierry Vincent, et al.. T4 apoptosis in the acute phase of SARS-CoV-2 infection predicts long COVID. Frontiers in Immunology, 2024, 14, ⟨10.3389/fimmu.2023.1335352⟩. ⟨hal-05527034⟩
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Thomas Chatzikonstantinou, Andreas Agathangelidis, Anastasia Chatzidimitriou, Cristina Tresoldi, Zadie Davis, et al.. Updates of the ERIC recommendations on how to report the results from immunoglobulin heavy variable gene analysis in chronic lymphocytic leukemia. Leukemia, 2024, 38 (3), pp.679-680. ⟨10.1038/s41375-024-02163-4⟩. ⟨hal-04753592⟩
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Michaël Constantinides, Nicolas Robert, Caroline Multrier, Loïs Coënon, Mauricio Campos-Mora, et al.. FCGR3A F158V alleles frequency differs in multiple myeloma patients from healthy population. OncoImmunology, 2024, 13 (1), pp.2388306. ⟨10.1080/2162402X.2024.2388306⟩. ⟨hal-04704594⟩
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Denis Coulomb, Vanessa Lacheretz-Szablewski, Nicolas Robert, Anne-Marie Dupuy, Rayane Berrahouane, et al.. A case of refractory IgG4-related disease successfully treated with daratumumab and lenalidomide. Rheumatology, 2024, 64 (2), pp.895-897. ⟨10.1093/rheumatology/keae448⟩. ⟨hal-04704591⟩
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Chahrazed Debbagh, Géraldine Folch, Joumana Jabado-Michaloud, Véronique Giudicelli, Sofia Kossida. Deciphering Gorilla gorilla gorilla immunoglobulin loci in multiple genome assemblies and enrichment of IMGT resources. Frontiers in Immunology, 2024, 15, ⟨10.3389/fimmu.2024.1475003⟩. ⟨hal-04866854⟩
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Sandrine Denaud, Marion Bardou, Giorgio-Lucio Papadopoulos, Stefan Grob, Marco Di Stefano, et al.. A PRE loop at the dac locus acts as a topological chromatin structure that restricts and specifies enhancer–promoter communication. Nature Structural and Molecular Biology, 2024, ⟨10.1038/s41594-024-01375-7⟩. ⟨hal-04762614⟩
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Boubou Diagouraga, Izabella Tambones, Coralie Carivenc, Chérine Bechara, Marc Nadal, et al.. The TOPOVIBL meiotic DSB formation protein: new insights from its biochemical and structural characterization. Nucleic Acids Research, In press, 52 (15), pp.8930-8946. ⟨10.1093/nar/gkae587⟩. ⟨hal-04643639⟩
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Tom Egger, Laura Morano, Marie-Pierre Blanchard, Jihane Basbous, Angelos Constantinou. Spatial organization and functions of Chk1 activation by TopBP1 biomolecular condensates. Cell Reports, 2024, 43 (4), pp.114064. ⟨10.1016/j.celrep.2024.114064⟩. ⟨hal-04544892⟩
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Anne Filleron, Renaud Cezar, Marc Fila, Nastassja Protsenko, Kathleen van den Hende, et al.. Regulatory T and B cells in pediatric Henoch–Schönlein purpura: friends or foes?. Arthritis Research & Therapy, 2024, 26 (1), pp.52. ⟨10.1186/s13075-024-03278-w⟩. ⟨hal-04961201⟩
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Maximilian H Fitz-James, Gonzalo Sabarís, Peter Sarkies, Frédéric Bantignies, Giacomo Cavalli. Interchromosomal contacts between regulatory regions trigger stable transgenerational epigenetic inheritance in Drosophila. Molecular Cell, 2024, 85 (4), pp.677-691. ⟨10.1016/j.molcel.2024.11.021⟩. ⟨hal-05399255⟩
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Marion Varoqui, Mourdas Mohamed, Bruno Mugat, Daniel Gourion, Maëlys Lemoine, et al.. Temporal and spatial niche partitioning in a retrotransposon community of the Drosophila melanogaster genome. Nucleic Acids Research, 2024, 53 (11), ⟨10.1093/nar/gkaf516⟩. ⟨hal-04695332v2⟩
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Dimitrios Vlachakis, Konstantinos Tsilafakis, Ioanna Kostavasili, Sophia Kossida, Manolis Mavroidis. Unraveling Desmin’s Head Domain Structure and Function. Cells, 2024, 13 (7), pp.603. ⟨10.3390/cells13070603⟩. ⟨hal-04753657⟩
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Sascha Werner, Pilar Okenve-Ramos, Philip Hehlert, Sihem Zitouni, Pranjali Priya, et al.. IFT88 maintains sensory function by localising signalling proteins along Drosophila cilia. Life Science Alliance, 2024, 7 (5), pp.e202302289. ⟨10.26508/lsa.202302289⟩. ⟨hal-04784550⟩
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Akbar Zainu, Pauline Dupaigne, Soumya Bouchouika, Julien Cau, Julie a J Clément, et al.. FIGNL1-FIRRM is essential for meiotic recombination and prevents DNA damage-independent RAD51 and DMC1 loading. Nature Communications, 2024, 15 (1), pp.7015. ⟨10.1038/s41467-024-51458-8⟩. ⟨hal-04686765⟩
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Journal articles

2023

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Nika Abdollahi, Lucile Jeusset, Anne de Septenville, Frederic Davi, Juliana Silva Bernardes. Reconstructing B cell lineage trees with minimum spanning tree and genotype abundances. BMC Bioinformatics, 2023, 24 (1), pp.70. ⟨10.1186/s12859-022-05112-z⟩. ⟨hal-04246909⟩
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Emile Alghoul, Jihane Basbous, Angelos Constantinou. Compartmentalization of the DNA damage response: Mechanisms and functions. DNA Repair, 2023, 128, pp.103524. ⟨10.1016/j.dnarep.2023.103524⟩. ⟨hal-04251195⟩
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Emile Alghoul, Matteo Paloni, Arato Takedachi, S Urbach, Alessandro Barducci, et al.. Compartmentalization of the SUMO/RNF4 pathway by SLX4 drives DNA repair. Molecular Cell, 2023, 83 (10), pp.1640-1658.e9. ⟨10.1016/j.molcel.2023.03.021⟩. ⟨hal-04128155⟩
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Marne Azarias da Silva, Pierre Nioche, Calaiselvy Soudaramourty, Anne Bull-Maurer, Mounira Tiouajni, et al.. Repetitive mRNA vaccination is required to improve the quality of broad-spectrum anti–SARS-CoV-2 antibodies in the absence of CXCL13. Science Advances , 2023, 9 (31), pp.eadg2122. ⟨10.1126/sciadv.adg2122⟩. ⟨hal-05484172⟩
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L. Baert, B. Manfroi, M. Quintero, O. Chavarria, P.V. Barbon, et al.. 3-O sulfation of syndecan-1 mediated by the sulfotransferase HS3ST3a1 enhances myeloma aggressiveness. Matrix Biology, 2023, 120, pp.60-75. ⟨10.1016/j.matbio.2023.05.005⟩. ⟨hal-04444452⟩
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Daniel Ballmer, Mathieu Tardat, Raphael Ortiz, Alexandra Graff-Meyer, Evgeniy A Ozonov, et al.. HP1 proteins regulate nucleolar structure and function by secluding pericentromeric constitutive heterochromatin. Nucleic Acids Research, 2023, 51 (1), pp.117-143. ⟨10.1093/nar/gkac1159⟩. ⟨hal-04302016⟩
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Amandine Barral, Jérôme Déjardin. The chromatin signatures of enhancers and their dynamic regulation. Nucleus, 2023, 14 (1), pp.1. ⟨10.1080/19491034.2022.2160551⟩. ⟨hal-05470232⟩
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Frédéric Baudat, Bernard de Massy. Mutation hotspots during meiosis. Science, 2023, 382 (6674), pp.997-998. ⟨10.1126/science.adl2021⟩. ⟨hal-04769188⟩
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Sarah Bonnet, Serge Carillo, Baptiste Legrand, Barbara Burroni, Thierry Lavabre-Bertrand, et al.. Extreme thrombocytosis with an aggressive evolution harboring a novel variant of calreticulin (CALR) in exon 3. European Journal of Haematology, 2023, 112 (3), pp.475-478. ⟨10.1111/ejh.14126⟩. ⟨hal-04550049⟩
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Emilia Boris, Alexandre Theron, Valentin Montagnon, Nicolas Rouquier, Marion Almeras, et al.. Immunophenotypic portrait of leukemia‐associated‐phenotype markers in B acute lymphoblastic leukemia. Cytometry Part B: Clinical Cytometry, 2023, 106 (1), pp.45-57. ⟨10.1002/cyto.b.22153⟩. ⟨hal-04704605⟩
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Pierre Boudinot, Samuel Novas, Luc Jouneau, Stanislas Mondot, Marie-Paule Lefranc, et al.. Evolution of T cell receptor beta loci in salmonids. Frontiers in Immunology, 2023, 14, pp.1238321. ⟨10.3389/fimmu.2023.1238321⟩. ⟨hal-04280847v2⟩
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Angélique Bruyer, Laure Dutrieux, Hugues de Boussac, Thibaut Martin, Djamila Chemlal, et al.. Combined inhibition of Wee1 and Chk1 as a therapeutic strategy in multiple myeloma. Frontiers in Oncology, 2023, 13, pp.1271847. ⟨10.3389/fonc.2023.1271847⟩. ⟨hal-04704603⟩
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Giacomo Cavalli, Job Dekker. Editorial overview: Multiscale regulation of genome folding in space, time, and across the tree of life. Current Opinion in Genetics and Development, 2023, 82, pp.102095. ⟨10.1016/j.gde.2023.102095⟩. ⟨hal-05486248⟩
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Djamila Chemlal, Emmanuel Varlet, Amelie Machura, Sara Ovejero, Guilhem Requirand, et al.. EZH2 targeting induces CD38 upregulation and response to anti-CD38 immunotherapies in multiple myeloma. Leukemia, 2023, 37 (9), pp.1925-1928. ⟨10.1038/s41375-023-01983-0⟩. ⟨hal-04252294⟩
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Gwen-Jirō Clochard, Aby Mbengue, Clément Mettling, Birane Diouf, Charlotte Faurie, et al.. The effect of the 7R allele at the DRD4 locus on risk tolerance is independent of background risk in Senegalese fishermen. Scientific Reports, 2023, 13 (1), pp.622. ⟨10.1038/s41598-022-27002-3⟩. ⟨hal-03954770⟩
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Xavier Contreras, David Depierre, Charbel Akkawi, Marina Srbic, Marion Helsmoortel, et al.. PAPγ associates with PAXT nuclear exosome to control the abundance of PROMPT ncRNAs. Nature Communications, 2023, 14 (1), pp.6745. ⟨10.1038/s41467-023-42620-9⟩. ⟨hal-04288401⟩
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Alexia Damour, Vera Slaninova, Ovidiu Radulescu, Edouard Bertrand, Eugenia Basyuk. Transcriptional Stochasticity as a Key Aspect of HIV-1 Latency. Viruses, 2023, 15 (9), pp.1969. ⟨10.3390/v15091969⟩. ⟨hal-04235056⟩
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Mattia Difrancesco, Manon Marrot, Eleonora Torre, Pietro Mesirca, Romain Davaze, et al.. Characterization of sinoatrial automaticity in Microcebus murinus to study the effect of aging on cardiac activity and the correlation with longevity. Scientific Reports, 2023, 13 (1), pp.3054. ⟨10.1038/s41598-023-29723-5⟩. ⟨hal-04010411⟩
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Maria Douaihy, Rachel Topno, Mounia Lagha, Edouard Bertrand, Ovidiu Radulescu. BurstDECONV: a signal deconvolution method to uncover mechanisms of transcriptional bursting in live cells. Nucleic Acids Research, 2023, 51 (16), pp.e88-e88. ⟨10.1093/nar/gkad629⟩. ⟨hal-04286170⟩
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Emilie Dujardin, Marjolaine André, Aurélie Dewaele, Béatrice Mandon-Pépin, Francis Poulat, et al.. DMRT1 is a testis-determining gene in rabbits and is also essential for female fertility. eLife, 2023, 12, ⟨10.7554/eLife.89284.3⟩. ⟨hal-04269239⟩
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Claire Dupont, Dhanvantri Chahar, Antonio Trullo, Thierry Gostan, Caroline Surcis, et al.. Evidence for low nanocompaction of heterochromatin in living embryonic stem cells. EMBO Journal, 2023, ⟨10.15252/embj.2021110286⟩. ⟨hal-04120251⟩
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Tom Egger, Antoine Aze, Domenico Maiorano. Protocol to analyze endogenous translesion DNA synthesis in single mammalian cells. STAR Protocols, 2023, 4, ⟨10.1016/j.xpro.2023.102361⟩. ⟨hal-04289638⟩
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Tom Egger, Antoine Aze, Domenico Maiorano. Detection of endogenous translesion DNA synthesis in single mammalian cells. Cell Reports Methods, 2023, 3 (6), pp.100501. ⟨10.1016/j.crmeth.2023.100501⟩. ⟨hal-04289626⟩
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Martina Emde-Rajaratnam, Susanne Beck, Vladimir Benes, Hans Salwender, Uta Bertsch, et al.. RNA-sequencing based first choice of treatment and determination of risk in multiple myeloma. Frontiers in Immunology, 2023, 14, pp.1286700. ⟨10.3389/fimmu.2023.1286700⟩. ⟨hal-04704606⟩
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Léa Fornero, Tarik Kanouni, Jean-Jacques Tudesq, Camille Pochard, Pauline Verot, et al.. Preventive plasmapheresis for rituximab related flare in cryoglobulinemic vasculitis. Journal of Translational Autoimmunity, 2023, 6, pp.100194. ⟨10.1016/j.jtauto.2023.100194⟩. ⟨hal-05093799⟩
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Lu Fu, Chen Gu, Kazufumi Mochizuki, Jie Xiong, Wei Miao, et al.. The genome-wide meiotic recombination landscape in ciliates and its implications for crossover regulation and genome evolution. International Journal of Genetics and Genomics, 2023, 51, pp.302-312. ⟨10.1016/j.jgg.2023.09.013⟩. ⟨hal-04283064⟩
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Rebecca Golfinopoulou, Véronique Giudicelli, Taciana Manso, Sofia Kossida. Delving into Molecular Pathways: Analyzing the Mechanisms of Action of Monoclonal Antibodies Integrated in IMGT/mAb-DB for Myasthenia Gravis. Vaccines, 2023, 11 (12), pp.1756. ⟨10.3390/vaccines11121756⟩. ⟨hal-04866839⟩
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Elodie Gregoire, Marie-Cécile de Cian, Roberta Migale, Aitana Perea-Gomez, Sébastien Schaub, et al.. The −KTS splice variant of WT1 is essential for ovarian determination in mice. Science, 2023, 382 (6670), pp.600-606. ⟨10.1126/science.add8831⟩. ⟨hal-04285584⟩
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Jonathan Heuzé, Samira Kemiha, Antoine Barthe, Alba Torán Vilarrubias, Umberto Aiello, et al.. RNase H2 degrades toxic RNA : DNA hybrids behind stalled forks to promote replication restart. EMBO Journal, 2023, 42 (23), pp.e113104. ⟨10.15252/embj.2022113104⟩. ⟨hal-04302255⟩
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Jonathan Heuzé, Yea-Lih Lin, Armelle Lengronne, Jérôme Poli, Philippe Pasero. Impact of R-loops on oncogene-induced replication stress in cancer cells. Comptes Rendus. Biologies, 2023, 346 (G2), pp.95-105. ⟨10.5802/crbiol.123⟩. ⟨hal-04302269⟩
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Lore Hoes, Karin Voordeckers, Rüveyda Dok, Bram Boeckx, Bart Steemans, et al.. Ethanol induces replication fork stalling and membrane stress in immortalized laryngeal cells. iScience, 2023, 26 (12), pp.108564. ⟨10.1016/j.isci.2023.108564⟩. ⟨hal-05484996⟩
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Élisabeth Houbron, Sophie Mockly, Sophia Rafasse, Nathalie Gros, Delphine Muriaux, et al.. Biochemistry-informed design selects potent siRNAs against SARS-CoV-2. RNA Biology, 2023, 20 (1), pp.272-280. ⟨10.1080/15476286.2023.2217400⟩. ⟨hal-04174081⟩
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Lucile Jeusset, Nika Abdollahi, Thibaud Verny, Marine Armand, Anne Langlois de Septenville, et al.. ViCloD, an interactive web tool for visualizing B cell repertoires and analyzing intraclonal diversities: application to human B-cell tumors. NAR Genomics and Bioinformatics, 2023, 5 (2), pp.lqad064. ⟨10.1093/nargab/lqad064⟩. ⟨hal-04246913⟩
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Hui Ji, Bei Wang, Yifan Shen, David Labib, Joyce Lei, et al.. The Drosophila chemokine–like Orion bridges phosphatidylserine and Draper in phagocytosis of neurons. Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (24), pp.e2303392120. ⟨10.1073/pnas.2303392120⟩. ⟨hal-04250191⟩
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Tatyana G Kahn, Mikhail Savitsky, Chikuan Kuong, Caroline Jacquier, Giacomo Cavalli, et al.. Topological screen identifies hundreds of Cp190-and CTCF-dependent Drosophila chromatin insulator elements. Science Advances , 2023, 9 (5), pp.eade0090. ⟨10.1126/sciadv.ade0090⟩. ⟨hal-04114124⟩
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Taiyun Kim, Hani Jieun Kim, Andrew Oldfield, Pengyi Yang. PAD2: interactive exploration of transcription factor genomic colocalization using ChIP-seq data. STAR Protocols, 2023, 4 (2), pp.102203. ⟨10.1016/j.xpro.2023.102203⟩. ⟨hal-04299411⟩
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Lucy Kundura, Renaud Cezar, Manuela Pastore, Christelle Reynes, Jérémy Deverdun, et al.. Low levels of peripheral blood activated and senescent T cells characterize people with HIV-1-associated neurocognitive disorders. Frontiers in Immunology, 2023, 14, pp.1267564. ⟨10.3389/fimmu.2023.1267564⟩. ⟨hal-04287593⟩
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Camille Laberthonnière, Mégane Delourme, Raphaël Chevalier, Camille Dion, Benjamin Ganne, et al.. In skeletal muscle and neural crest cells, SMCHD1 regulates biological pathways relevant for Bosma syndrome and facioscapulohumeral dystrophy phenotype. Nucleic Acids Research, 2023, 51 (14), pp.7269-7287. ⟨10.1093/nar/gkad523⟩. ⟨hal-04134959⟩
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Guillaume Labrousse, Pierre Vande Perre, Genis Parra, Marion Jaffrelot, Laura Leroy, et al.. The hereditary N363K POLE exonuclease mutant extends PPAP tumor spectrum to glioblastomas by causing DNA damage and aneuploidy in addition to increased mismatch mutagenicity. NAR Cancer, 2023, 5 (2), ⟨10.1093/narcan/zcad011⟩. ⟨hal-04284119⟩
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Sylvain Lamure, Charles Herbaux. Anti‐PD ‐1 therapy can possibly reverse CAR T cells exhaustion in DLBCL. British Journal of Haematology, 2023, 202 (2), pp.217-218. ⟨10.1111/bjh.18797⟩. ⟨hal-04918596⟩
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Eliana Lara-Barba, Alba Torán-Vilarrubias, María Moriel-Carretero. An Expansion of the Endoplasmic Reticulum that Halts Autophagy is Permissive to Genome Instability. Contact, 2023, 6, pp.251525642311577. ⟨10.1177/25152564231157706⟩. ⟨hal-04048780⟩
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Hamida Laroussi, Ariadna Juarez-Martinez, Aline Le Roy, Elisabetta Boeri Erba, Frank Gabel, et al.. Characterization of the REC114‐MEI4‐IHO1 complex regulating meiotic DNA double‐strand break formation. EMBO Journal, 2023, 42 (16), pp.e113866. ⟨10.15252/embj.2023113866⟩. ⟨hal-04199701⟩
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Rana Lebdy, Marine Canut, Julie Patouillard, Jean‐charles Cadoret, Anne Letessier, et al.. The nucleolar protein GNL3 prevents resection of stalled replication forks. EMBO Reports, 2023, 24 (12), pp.e57585. ⟨10.15252/embr.202357585⟩. ⟨hal-04401458⟩
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Rana Lebdy, Julie Patouillard, Marion Larroque, Serge Urbach, Raghida Abou Merhi, et al.. The organizer of chromatin topology RIF1 ensures cellular resilience to DNA replication stress. Life Science Alliance, 2023, 6 (4), pp.e202101186. ⟨10.26508/lsa.202101186⟩. ⟨hal-03987591⟩
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Danyel Lee, Jérémie Le Pen, Ahmad Yatim, Beihua Dong, Yann Aquino, et al.. Inborn errors of OAS–RNase L in SARS-CoV-2–related multisystem inflammatory syndrome in children. Science, 2023, 379 (6632), pp.eabo3627. ⟨10.1126/science.abo3627⟩. ⟨hal-04089777⟩
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Marie-Paule Lefranc, Gérard Lefranc. Human Gm, Km, and Am Allotypes: WHO/IMGT Nomenclature and IMGT Unique Numbering for Immunoinformatics and Therapeutical Antibodies. BioMedInformatics, 2023, 3 (3), pp.649-690. ⟨10.3390/biomedinformatics3030044⟩. ⟨hal-05470201⟩
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Taciana Manso, Anjana Kushwaha, Nika Abdollahi, Patrice Duroux, Véronique Giudicelli, et al.. Mechanisms of action of monoclonal antibodies in oncology integrated in IMGT/mAb-DB. Frontiers in Immunology, 2023, 14, pp.1129323. ⟨10.3389/fimmu.2023.1129323⟩. ⟨hal-04114137⟩
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Johanna Marines, Francesca Lorenzini, Karima Kissa, Laura Fontenille. Modelling 3D Tumour Microenvironment In Vivo: A Tool to Predict Cancer Fate. Current Issues in Molecular Biology, 2023, 45 (11), pp.9076-9083. ⟨10.3390/cimb45110569⟩. ⟨hal-05111253⟩
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Cybel Mehawej, Eliane Chouery, Shirine Azar-Atallah, Wassim Shebaby, Valérie Delague, et al.. POLD3 deficiency is associated with severe combined immunodeficiency, neurodevelopmental delay, and hearing impairment. Clinical Immunology, 2023, 251, pp.109326. ⟨10.1016/j.clim.2023.109326⟩. ⟨hal-04113279⟩
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Sophie Mockly, Hervé Seitz. Synthetic miR-34a against solid tumors: a predictable failure. British Journal of Cancer, In press, ⟨10.1038/s41416-022-02123-8⟩. ⟨hal-03908295⟩
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Mourdas Mohamed, François Sabot, Marion Varoqui, Bruno Mugat, Katell Audouin, et al.. TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches. Genome Biology, 2023, 24 (1), pp.63. ⟨10.1186/s13059-023-02911-2⟩. ⟨hal-04291760⟩
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Jérôme Moreaux, Alexander A. Shtil. Editorial: Transcriptional control in normal and malignant B-lymphocytes. Frontiers in Immunology, 2023, 14, pp.1185252. ⟨10.3389/fimmu.2023.1185252⟩. ⟨hal-04705020⟩
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Casilda Muñoz Castellano, Laurent Lacroix, Émilie Mathis, Paulina Prorok, Magali Hennion, et al.. The genetic landscape of origins of replication in P. falciparum. Nucleic Acids Research, 2023, 52 (2), pp.660 - 676. ⟨10.1093/nar/gkad1103⟩. ⟨hal-04535862⟩
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Rima Naït-Saïdi, Aymeric Chartier, Emmanuelle Abgueguen, Philippe Guédat, Martine Simonelig. The small compound Icerguastat reduces muscle defects in oculopharyngeal muscular dystrophy through the PERK pathway of the unfolded protein response. Open Biology, 2023, 13 (4), pp.230008. ⟨10.1098/rsob.230008⟩. ⟨hal-04121825⟩
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Simon Nicot, Ghislain Gillard, Hathaichanok Impheng, Ewa Joachimiak, Serge Urbach, et al.. A family of carboxypeptidases catalyzing α- and β-tubulin tail processing and deglutamylation. Science Advances , 2023, 9 (37), pp.eadi7838. ⟨10.1126/sciadv.adi7838⟩. ⟨hal-04213211⟩
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Parisa Nobari, Valérie Doye, Charlene Boumendil. Metazoan nuclear pore complexes in gene regulation and genome stability. DNA Repair, 2023, 130, pp.103565. ⟨10.1016/j.dnarep.2023.103565⟩. ⟨hal-04299540⟩
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Elsa Nöel, Sophie Lefèvre, Marion Varoqui, Alison B Duncan. The scale of competition impacts parasite virulence evolution. Evolutionary Ecology, 2023, 37, pp.153-163. ⟨10.1007/s10682-022-10199-0⟩. ⟨hal-03750434⟩
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Sara Ovejero, Sylvain Kumanski, Caroline Soulet, Julie Azarli, Benjamin Pardo, et al.. A sterol‐PI(4)P exchanger modulates the Tel1/ATM axis of the DNA damage response. EMBO Journal, 2023, ⟨10.15252/embj.2022112684⟩. ⟨hal-04135707⟩
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Xiao Peng, Moudjahed Saleh Al-Ddafari, Andrés Caballero-Oteyza, Chahrazed El Mezouar, Pavla Mrovecova, et al.. Next generation sequencing (NGS)-based approach to diagnosing Algerian patients with suspected inborn errors of immunity (IEIs). Clinical Immunology, 2023, 256, pp.109758. ⟨10.1016/j.clim.2023.109758⟩. ⟨hal-05483643⟩
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Clarisse Perron, Pascal Carme, Arnau Llobet Rosell, Eva Minnaert, Salomé Ruiz-Demoulin, et al.. Chemokine-like Orion is involved in the transformation of glial cells into phagocytes in different developmental neuronal remodeling paradigms. Development (Cambridge, England), 2023, 150 (19), pp.dev201633. ⟨10.1242/dev.201633⟩. ⟨hal-04251975⟩
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Pascal Philibert, Stéphanie Déjardin, Mélissa Girard, Quentin Durix, Anne-Alicia Gonzalez, et al.. Cocktails of NSAIDs and 17α Ethinylestradiol at Environmentally Relevant Doses in Drinking Water Alter Puberty Onset in Mice Intergenerationally. International Journal of Molecular Sciences, 2023, 24 (6), pp.5890. ⟨10.3390/ijms24065890⟩. ⟨hal-04301999⟩
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Pascal Philibert, Isabelle Stévant, Stéphanie Déjardin, Mélissa Girard, Eli Sellem, et al.. Intergenerational effects on fertility in male and female mice after chronic exposure to environmental doses of NSAIDs and 17α-ethinylestradiol mixtures. Food and Chemical Toxicology, 2023, 182, pp.114085. ⟨10.1016/j.fct.2023.114085⟩. ⟨hal-04248173⟩
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Paulina Prorok, Faezeh Forouzanfar, Nerea Murugarren, Isabelle Peiffer, Romain Charton, et al.. Loss of Ezh2 function remodels the DNA replication initiation landscape. Cell Reports, 2023, 42 (4), pp.112280. ⟨10.1016/j.celrep.2023.112280⟩. ⟨hal-05486476⟩
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Gonzalo Sabarís, Maximilian Fitz-James, Giacomo Cavalli. Epigenetic inheritance in adaptive evolution. Annals of the New York Academy of Sciences, 2023, ⟨10.1111/nyas.14992⟩. ⟨hal-04114105⟩
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Thomas Sabaté, Benoît Lelandais, Edouard Bertrand, Christophe Zimmer. Polymer simulations guide the detection and quantification of chromatin loop extrusion by imaging. Nucleic Acids Research, 2023, ⟨10.1093/nar/gkad034⟩. ⟨pasteur-04021372⟩
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Adham Safieddine, Emeline Coleno, Frederic Lionneton, Abdel-Meneem Traboulsi, Soha Salloum, et al.. HT-smFISH: a cost effective and flexible workflow for high-throughput single molecule RNA imaging. Nature Protocols, 2023, 18, pp.157-187. ⟨10.1038/s41596-022-00750-2⟩. ⟨hal-03834928⟩
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Mohammad Salma, Elina Alaterre, Jérôme Moreaux, Eric Soler. Var∣Decrypt: a novel and user-friendly tool to explore and prioritize variants in whole-exome sequencing data. Epigenetics & Chromatin, 2023, 16 (1), pp.23. ⟨10.1186/s13072-023-00497-4⟩. ⟨hal-04705018⟩
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Malvina Schatz, Laetitia Marty, Camille Ounadjela, Phuoc Bao Viet Tong, Ilaria Cardace, et al.. A Tripartite Complex HIV-1 Tat-Cyclophilin A-Capsid Protein Enables Tat Encapsidation That Is Required for HIV-1 Infectivity. Journal of Virology, 2023, 97 (4), ⟨10.1128/jvi.00278-23⟩. ⟨hal-04106774⟩
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Florence Schlotter, Salim Mérouani, Justine Flayac, Valentyne Kogey, Amani Issa, et al.. Proteomic analyses reveal new features of the box H/ACA RNP biogenesis. Nucleic Acids Research, 2023, 51 (7), pp.3357-3374. ⟨10.1093/nar/gkad129⟩. ⟨hal-04020084⟩
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Uwe Schwartz, Tetsuro Komatsu, Claudia Huber, Floriane Lagadec, Conradin Baumgartl, et al.. Changes in adenoviral chromatin organization precede early gene activation upon infection. EMBO Journal, 2023, 42 (19), ⟨10.15252/embj.2023114162⟩. ⟨hal-04235078⟩
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Clara Taffoni, Johanna Marines, Hanane Chamma, Soumyabrata Guha, Mathilde Saccas, et al.. DNA damage repair kinase DNA‐PK and cGAS synergize to induce cancer‐related inflammation in glioblastoma. EMBO Journal, 2023, 42 (7), pp.e111961. ⟨10.15252/embj.2022111961⟩. ⟨hal-03923380⟩
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Suzie Thenin-Houssier, Shinichi Machida, Cyprien Jahan, Lucie Bonnet-Madin, Scarlette Abbou, et al.. POLE3 is a repressor of unintegrated HIV-1 DNA required for efficient virus integration and escape from innate immune sensing. Science Advances , 2023, 9 (44), pp.3642. ⟨10.1126/sciadv.adh3642⟩. ⟨hal-04284687⟩
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Hélène Tourrière, Karim Chebli, Latifa Zekri, Brice Courselaud, Jean-Marie Blanchard, et al.. The RasGAP-associated endoribonuclease G3BP mediates stress granule assembly. Journal of Cell Biology, 2023, 222 (11), ⟨10.1083/jcb.200212128072023new⟩. ⟨hal-04293850⟩
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Juan Manuel Valverde, Geronimo Dubra, Michael Phillips, Austin Haider, Carlos A Elena-Real, et al.. A cyclin-dependent kinase-mediated phosphorylation switch of disordered protein condensation. Nature Communications, 2023, 14 (1), pp.6316. ⟨10.1038/s41467-023-42049-0⟩. ⟨hal-04239889⟩
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Domagoj Vugic, Isaac Dumoulin, Charlotte Martin, Anna Minello, Lucia Alvaro-Aranda, et al.. Replication gap suppression depends on the double-strand DNA binding activity of BRCA2. Nature Communications, 2023, 14 (1), pp.446. ⟨10.1038/s41467-023-36149-0⟩. ⟨hal-03987617⟩
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Yanmeng Wang, Catharina Muylaert, Arne Wyns, Philip Vlummens, Kim de Veirman, et al.. S-adenosylmethionine biosynthesis is a targetable metabolic vulnerability in multiple myeloma. Haematologica, 2023, 109, pp.256-271. ⟨10.3324/haematol.2023.282866⟩. ⟨hal-04705017⟩
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William Wang, Karen Artiles, Shinichi Machida, Monsef Benkirane, Nimit Jain, et al.. Combined direct/indirect detection allows identification of DNA termini in diverse sequencing datasets and supports a multiple-initiation-site model for HIV plus-strand synthesis. BioRxiv, 2023, ⟨10.1101/2023.06.12.544617⟩. ⟨hal-04303135⟩
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Journal articles

2022

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A. Abecassis, J. Vitte, W. Sahli, M. Michel. Cellules de l’allergie : mise au point sur les mastocytes et les éosinophiles. Revue Française d'Allergologie, 2022, 62 (7), pp.598-603. ⟨10.1016/j.reval.2022.03.007⟩. ⟨hal-04039525⟩
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Yoann Abel, Christophe Charron, Camille Virciglio, Valérie Bourguignon-Igel, Marc Quinternet, et al.. The interaction between RPAP3 and TRBP reveals a possible involvement of the HSP90/R2TP chaperone complex in the regulation of miRNA activity. Nucleic Acids Research, 2022, 50 (4), pp.2172-2189. ⟨10.1093/nar/gkac086⟩. ⟨hal-03583324⟩
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Andreas Agathangelidis, Anastasia Chatzidimitriou, Thomas Chatzikonstantinou, Cristina Tresoldi, Zadie Davis, et al.. Immunoglobulin gene sequence analysis in chronic lymphocytic leukemia: the 2022 update of the recommendations by ERIC, the European Research Initiative on CLL. Leukemia, 2022, 36 (8), pp.1961-1968. ⟨10.1038/s41375-022-01604-2⟩. ⟨hal-04080313⟩
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Umberto Aiello, Drice Challal, Griselda Wentzinger, Armelle Lengronne, Rowin Appanah, et al.. Sen1 is a key regulator of transcription-driven conflicts. Molecular Cell, 2022, 82 (16), pp.2952-2966.e6. ⟨10.1016/j.molcel.2022.06.021⟩. ⟨hal-03854140⟩
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Elina Alaterre, Sara Ovejero, Laurie Herviou, Hugues de Boussac, Giorgio Papadopoulos, et al.. Comprehensive characterization of the epigenetic landscape in Multiple Myeloma. Theranostics, 2022, 12 (4), pp.1715-1729. ⟨10.7150/thno.54453⟩. ⟨hal-03810219⟩
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Sonia André, Marne Azarias da Silva, Morgane Picard, Aurélie Alleaume-Buteau, Lucy Kundura, et al.. Low quantity and quality of anti-spike humoral response is linked to CD4 T-cell apoptosis in COVID-19 patients. Cell Death and Disease, 2022, 13 (8), pp.741. ⟨10.1038/s41419-022-05190-0⟩. ⟨inserm-03774218⟩
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Sonia André, Morgane Picard, Renaud Cezar, Florence Roux-Dalvai, Aurélie Alleaume-Butaux, et al.. T cell apoptosis characterizes severe Covid-19 disease. Cell Death and Differentiation, 2022, Online ahead of print. ⟨10.1038/s41418-022-00936-x⟩. ⟨inserm-03738821⟩
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Amandine Barral, Gabrielle Pozo, Lucas Ducrot, Giorgio L Papadopoulos, Sandrine Sauzet, et al.. SETDB1/NSD-dependent H3K9me3/H3K36me3 dual heterochromatin maintains gene expression profiles by bookmarking poised enhancers. Molecular Cell, 2022, 82 (4), pp.816 - 832.e12. ⟨10.1016/j.molcel.2021.12.037⟩. ⟨hal-03748434⟩
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Polina Belokopytova, Emil Viesná, Mateusz Chiliński, Yifeng Qi, Hossein Salari, et al.. 3DGenBench: a web-server to benchmark computational models for 3D Genomics. Nucleic Acids Research, 2022, 50 (W1), pp.W4-W12. ⟨10.1093/nar/gkac396⟩. ⟨hal-04190582⟩
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Monsef Benkirane. Condensates, the place to hide self-immunostimulatory RNA. Molecular Cell, 2022, 82 (20), pp.3754-3755. ⟨10.1016/j.molcel.2022.09.028⟩. ⟨hal-04284712⟩
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Olivier Binda, Franceline Juillard, Julia Novion Ducassou, Constance Kleijwegt, Geneviève Paris, et al.. SMA-linked SMN mutants prevent phase separation properties and SMN interactions with FMRP family members. Life Science Alliance, 2022, 6 (1), pp.e202201429. ⟨10.26508/lsa.202201429⟩. ⟨hal-03874288⟩
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Brigitte Boizet-Bonhoure, Stéphanie Déjardin, Moïra Rossitto, Francis Poulat, Pascal Philibert. Using Experimental Models to Decipher the Effects of Acetaminophen and NSAIDs on Reproductive Development and Health. Frontiers in Toxicology, 2022, 4, pp.835360. ⟨10.3389/ftox.2022.835360⟩. ⟨hal-03871593⟩
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Ana Boulanger, Jean-Maurice Dura. Orion et le dialogue neurone-glie au cours du remodelage neuronal. La Lettre des Neurosciences, A paraître, 62, pp.29-32. ⟨hal-03684193⟩
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Ana Boulanger, Jean‐maurice Dura. Neuron‐glia crosstalk in neuronal remodeling and degeneration: Neuronal signals inducing glial cell phagocytic transformation in Drosophila. BioEssays, 2022, 44 (5), ⟨10.1002/bies.202100254⟩. ⟨hal-03684180⟩
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Henri-Marc Bourbon, Mikhail Benetah, Emmanuelle Guillou, Luis Humberto Mojica-Vazquez, Aissette Baanannou, et al.. A shared ancient enhancer element differentially regulates the bric-a-brac tandem gene duplicates in the developing Drosophila leg. PLoS Genetics, 2022, 18 (3), pp.e1010083. ⟨10.1371/journal.pgen.1010083⟩. ⟨hal-03761668⟩
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Julia Brinkmeier, Susana M. Coelho, Henri-Marc Bourbon, Bernard de Massy. Evolution and Diversity of the TopoVI and TopoVI-like Subunits With Extensive Divergence of the TOPOVIBL subunit. Molecular Biology and Evolution, 2022, ⟨10.1093/molbev/msac227⟩. ⟨hal-04302026⟩
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Hanane Chamma, Soumyabrata Guha, Nadine Laguette, Isabelle Vila. Protocol to induce and assess cGAS-STING pathway activation in vitro. STAR Protocols, 2022, 3 (2), pp.101384. ⟨10.1016/j.xpro.2022.101384⟩. ⟨hal-03807593⟩
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Hanane Chamma, Isabelle Vila, Clara Taffoni, Andrei Turtoi, Nadine Laguette. Activation of STING in the pancreatic tumor microenvironment: a novel therapeutic opportunity. Cancer Letters, 2022, 538, pp.215694. ⟨10.1016/j.canlet.2022.215694⟩. ⟨hal-03668657⟩
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Jia-Ming Chang, Yi-Fu Weng, Wei-Ting Chang, Fu-An Lin, Giacomo Cavalli. HiCmapTools: a tool to access HiC contact maps. BMC Bioinformatics, 2022, 23 (1), pp.64. ⟨10.1186/s12859-022-04589-y⟩. ⟨hal-03810586⟩
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Julie Devin, Tatiana Cañeque, Yea-Lih Lin, Lucie Mondoulet, Jean-Luc Veyrune, et al.. Targeting Cellular Iron Homeostasis with Ironomycin in Diffuse Large B-cell Lymphoma. Cancer Research, 2022, 82 (6), pp.998-1012. ⟨10.1158/0008-5472.CAN-21-0218⟩. ⟨hal-04053839⟩
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Marco Di Stefano, Giacomo Cavalli. Integrative studies of 3D genome organization and chromatin structure. Current Opinion in Structural Biology, 2022, 77, pp.102493. ⟨10.1016/j.sbi.2022.102493⟩. ⟨hal-04114081⟩
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João Diogo Dias, Nazim Sarica, Axel Cournac, Romain Koszul, Christine Neuveut. Crosstalk between Hepatitis B Virus and the 3D Genome Structure. Viruses, 2022, 14 (2), pp.445. ⟨10.3390/v14020445⟩. ⟨pasteur-03689314⟩
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Camille Dion, Stéphane Roche, Camille Laberthonnière, Natacha Broucqsault, Virginie Mariot, et al.. SMCHD1 is involved in de novo methylation of theDUX4-encoding D4Z4 macrosatellite. iScience, 2022, 25 (2), pp.103757. ⟨10.1093/nar/gkz005⟩. ⟨hal-02002680⟩
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Raphael dos Santos Morais, Paulo E Santo, Marie Ley, Cédric Schelcher, Yoann Abel, et al.. Deciphering cellular and molecular determinants of human DPCD protein in complex with RUVBL1/RUVBL2 AAA-ATPases. Journal of Molecular Biology, 2022, 434 (19), pp.167760. ⟨10.1016/j.jmb.2022.167760⟩. ⟨hal-03843986⟩
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Nadia Vezzio-Vié, Marie-Alice Kong-Hap, Eve Combès, Augusto Faria Andrade, Maguy del Rio, et al.. Multiplexed-Based Assessment of DNA Damage Response to Chemotherapies Using Cell Imaging Cytometry. International Journal of Molecular Sciences, 2022, 23 (10), pp.5701. ⟨10.3390/ijms23105701⟩. ⟨hal-03871883v2⟩
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Isabelle Vila, Soumyabrata Guha, Joanna Kalucka, David Olagnier, Nadine Laguette. Alternative pathways driven by STING: From innate immunity to lipid metabolism. Cytokine and Growth Factor Reviews, 2022, ⟨10.1016/j.cytogfr.2022.08.006⟩. ⟨hal-03807587⟩
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Isabelle Vila, Hanane Chamma, Alizée Steer, Mathilde Saccas, Clara Taffoni, et al.. STING orchestrates the crosstalk between polyunsaturated fatty acid metabolism and inflammatory responses. Cell Metabolism, 2022, 34 (1), pp.125-139.e8. ⟨10.1016/j.cmet.2021.12.007⟩. ⟨hal-03520564⟩
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Philip Vlummens, Stefaan Verhulst, Kim de Veirman, Anke Maes, Eline Menu, et al.. Inhibition of the Protein Arginine Methyltransferase PRMT5 in High-Risk Multiple Myeloma as a Novel Treatment Approach. Frontiers in Cell and Developmental Biology, 2022, 10, ⟨10.3389/fcell.2022.879057⟩. ⟨hal-04705562⟩
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Dang-Nghiem Vo, Nicolas Leventoux, Mauricio Campos-Mora, Sandrine Gimenez, Pierre Corbeau, et al.. NK Cells Acquire CCR5 and CXCR4 by Trogocytosis in People Living with HIV-1. Vaccines, 2022, 10 (5), pp.688. ⟨10.3390/vaccines10050688⟩. ⟨hal-03757390⟩
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Xin Wang, Anne Ramat, Martine Simonelig, Mo-Fang Liu. Emerging roles and functional mechanisms of PIWI-interacting RNAs. Nature Reviews Molecular Cell Biology, 2022, 24 (2), pp.123-141. ⟨10.1038/s41580-022-00528-0⟩. ⟨hal-04736679⟩
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Yuanyuan Zhou, Lu Fu, Kazufumi Mochizuki, Jie Xiong, Wei Miao, et al.. Absolute quantification of chromosome copy numbers in the polyploid macronucleus of Tetrahymena thermophila at the single‐cell level. Journal of Eukaryotic Microbiology, 2022, 69 (4), pp.e12907. ⟨10.1111/jeu.12907⟩. ⟨hal-03854199⟩
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Journal articles

2021

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Yoann Abel, Ana C.F. Paiva, Jonathan Bizarro, Marie-Eve Chagot, Paulo E. Santo, et al.. NOPCHAP1 is a PAQosome cofactor that helps loading NOP58 on RUVBL1/2 during box C/D snoRNP biogenesis. Nucleic Acids Research, 2021, 49 (2), pp.1094-1113. ⟨10.1093/nar/gkaa1226⟩. ⟨hal-03070334⟩
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Andreas Agathangelidis, Anastasia Chatzidimitriou, Katerina Gemenetzi, Veronique Giudicelli, Maria Karypidou, et al.. Higher-order connections between stereotyped subsets: implications for improved patient classification in CLL. Blood, 2021, 137 (10), pp.1365-1376. ⟨10.1182/blood.2020007039⟩. ⟨hal-04337928⟩
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E. Agirre, A. Oldfield, N. Bellora, A. Segelle, R. F. Luco. Splicing-associated chromatin signatures: a combinatorial and position-dependent role for histone marks in splicing definition. Nature Communications, 2021, 12, pp.682. ⟨10.1038/s41467-021-20979-x⟩. ⟨hal-03178341⟩
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Abdou Akkouche, Sara Moodad, Rita Hleihel, Hala Skayneh, Séverine Chambeyron, et al.. In vivo antagonistic role of the Human T-Cell Leukemia Virus Type 1 regulatory proteins Tax and HBZ. PLoS Pathogens, 2021, 17 (1), pp.e1009219. ⟨10.1371/journal.ppat.1009219⟩. ⟨hal-03147929⟩
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Elina Alaterre, Veronika Vikova, Alboukadel Kassambara, Angélique Bruyer, Nicolas Robert, et al.. RNA-Sequencing-Based Transcriptomic Score with Prognostic and Theranostic Values in Multiple Myeloma. Journal of Personalized Medicine, 2021, 11 (10), pp.988. ⟨10.3390/jpm11100988⟩. ⟨hal-03639307⟩
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Emile Alghoul, Jihane Basbous, Angelos Constantinou. An optogenetic proximity labeling approach to probe the composition of inducible biomolecular condensates in cultured cells. STAR Protocols, 2021, 2 (3), pp.100677. ⟨10.1016/j.xpro.2021.100677⟩. ⟨hal-03367736⟩
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Meera Augustus, Donovan Pineau, Franck Aimond, Safa Azar, Davide Lecca, et al.. Identification of CRYAB+ KCNN3+ SOX9+ astrocyte-like and EGFR+ PDGFRA+ OLIG1+ oligodendrocyte-like tumoral cells in diffuse IDH1-mutant gliomas and implication of NOTCH1 signalling in their genesis. Cancers, 2021, 13 (9), pp.2107. ⟨10.3390/cancers13092107⟩. ⟨hal-03218662⟩
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Aline Bamia, Maha Sinane, Rima Naït-Saïdi, Jamila Dhiab, Marc Keruzoré, et al.. Anti-prion Drugs Targeting the Protein Folding Activity of the Ribosome Reduce PABPN1 Aggregation. Neurotherapeutics, 2021, 18 (2), pp.1137-1150. ⟨10.1007/s13311-020-00992-6⟩. ⟨hal-03158577⟩
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Ana Boulanger, Camille Thinat, Stephan Züchner, Lee Fradkin, Hugues Lortat-Jacob, et al.. Axonal chemokine-like Orion induces astrocyte infiltration and engulfment during mushroom body neuronal remodeling. Nature Communications, 2021, 12 (1), pp.1849. ⟨10.1038/s41467-021-22054-x⟩. ⟨hal-03184368⟩
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Benoît Bragantini, Christophe Charron, Maxime Bourguet, Arnaud Paul, Decebal Tiotiu, et al.. The box C/D snoRNP assembly factor Bcd1 interacts with the histone chaperone Rtt106 and controls its transcription dependent activity. Nature Communications, 2021, 12 (1), pp.1859. ⟨10.1038/s41467-021-22077-4⟩. ⟨hal-03181046⟩
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Vincent Brechin, Fumikazu Shinohara, Jun-Ichi Saito, Hervé Seitz, Yukihide Tomari. Mechanistic analysis of the enhanced RNAi activity by 6-mCEPh-purine at the 5′ end of the siRNA guide strand. RNA, 2021, 27, pp.151 - 162. ⟨10.1261/rna.073775.119⟩. ⟨hal-03375428⟩
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Renaud Cezar, Delphine Desigaud, Manuela Pastore, Lucy Kundura, Anne-Marie Dupuy, et al.. Insulin resistance is linked to a specific profile of immune activation in human subjects. Scientific Reports, 2021, 11 (1), pp.12314. ⟨10.1038/s41598-021-91758-3⟩. ⟨hal-03263947⟩
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Roman M Chabanon, Mathieu Rouanne, Christopher J. Lord, Jean-Charles Soria, Philippe Pasero, et al.. Targeting the DNA damage response in immuno-oncology: developments and opportunities. Nature Reviews Cancer, 2021, 21 (11), pp.701-717. ⟨10.1038/s41568-021-00386-6⟩. ⟨hal-03434931⟩
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Rosa Milagros Corrales, Slavica Vaselek, Rachel Neish, Laurence Berry, Camille D Brunet, et al.. The kinesin of the flagellum attachment zone in Leishmania is required for cell morphogenesis, cell division and virulence in the mammalian host. PLoS Pathogens, 2021, 17 (6), pp.e1009666. ⟨10.1371/journal.ppat.1009666⟩. ⟨hal-03299396⟩
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Mégane da Mota, Julien Cau, Julio Mateos-Langerak, Armelle Lengronne, Philippe Pasero, et al.. 3D positioning of tagged DNA loci by widefield and super-resolution fluorescence imaging of fixed yeast nuclei. STAR Protocols, 2021, 2 (2), pp.100525. ⟨10.1016/j.xpro.2021.100525⟩. ⟨hal-03349778⟩
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Céline Dard, Alice Aarnink, Camille Humeau, Christophe Picard, Barbara Proust, et al.. Biobanking in a histocompatibility laboratory. Guidelines from the Francophone Society of Histocompatibility and Immunogenetics (SFHI). Annales de Biologie Clinique, 2021, 79 (4), pp.371-378. ⟨10.1684/abc.2021.1661⟩. ⟨hal-03605177⟩
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Eva de Smedt, Julie Devin, Catharina Muylaert, Nicolas Robert, Guilhem Requirand, et al.. G9a/GLP targeting in MM promotes autophagy-associated apoptosis and boosts proteasome inhibitor–mediated cell death. Blood Advances, 2021, 5 (9), pp.2325-2338. ⟨10.1182/bloodadvances.2020003217⟩. ⟨hal-03243723⟩
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Quentin Delorme, Rémy Costa, Yasmine Mansour, Anna-Sophie Fiston-Lavier, Annie Chateau. Involving repetitive regions in scaffolding improvement. Journal of Bioinformatics and Computational Biology, 2021, 19 (06), pp.2140016. ⟨10.1142/S0219720021400163⟩. ⟨hal-04954688⟩
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Ihsan Dereli, Marcello Stanzione, Fabrizio Olmeda, Frantzeskos Papanikos, Marek Baumann, et al.. Four-pronged negative feedback of DSB machinery in meiotic DNA-break control in mice. Nucleic Acids Research, 2021, 49, pp.2609 - 2628. ⟨10.1093/nar/gkab082⟩. ⟨hal-03433922⟩
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Marco Di Stefano, Hans-Wilhelm Nützmann. Modeling the 3D genome of plants. Nucleus, 2021, 12 (1), pp.65-81. ⟨10.1080/19491034.2021.1927503⟩. ⟨hal-05524809⟩
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Romain Didier, Thibault Lhermusier, Vincent Auffret, Hélène Eltchaninoff, Herve Le Breton, et al.. TAVR Patients Requiring Anticoagulation: Direct Oral Anticoagulant or Vitamin K Antagonist?. JACC: Cardiovascular Interventions, 2021, 14 (15), pp.1704-1713. ⟨10.1016/j.jcin.2021.05.025⟩. ⟨inserm-03452171⟩
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João Diogo Dias, Nazim Sarica, Christine Neuveut. Early Steps of Hepatitis B Life Cycle: From Capsid Nuclear Import to cccDNA Formation. Viruses, 2021, 13 (5), pp.757. ⟨10.3390/v13050757⟩. ⟨hal-05523146⟩
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Jeremy Dufourt, Maelle Bellec, Antonio Trullo, Matthieu Dejean, Sylvain de Rossi, et al.. Imaging translation dynamics in live embryos reveals spatial heterogeneities. Science, 2021, 372 (6544), pp.840-844. ⟨10.1126/science.abc3483⟩. ⟨hal-03400867⟩
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Laure Dutrieux, Yea-Lih Lin, Malik Lutzmann, Raphaël Rodriguez, Michel Cogné, et al.. Transcription/Replication Conflicts in Tumorigenesis and Their Potential Role as Novel Therapeutic Targets in Multiple Myeloma. Cancers, 2021, 13 (15), pp.3755. ⟨10.3390/cancers13153755⟩. ⟨hal-03365519⟩
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Eva Stina Isabella Edholm, Christopher Graham Fenton, Stanislas Mondot, Ruth Hracky Paulssen, Marie Paule Lefranc, et al.. Profiling the T Cell Receptor Alpha/Delta Locus in Salmonids. Frontiers in Immunology, 2021, 12, pp.753960. ⟨10.3389/fimmu.2021.753960⟩. ⟨hal-03434949⟩
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Maksim Erokhin, Olga Chetverina, Balázs Győrffy, Victor Tatarskiy, Vladic Mogila, et al.. Clinical Correlations of Polycomb Repressive Complex 2 in Different Tumor Types. Cancers, 2021, 13 (13), pp.3155. ⟨10.3390/cancers13133155⟩. ⟨hal-03693300⟩
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Camilla Frattini, Alexy Promonet, Emile Alghoul, Sophie Vidal-Eychenie, Marie Lamarque, et al.. TopBP1 assembles nuclear condensates to switch on ATR signalling. Molecular Cell, 2021, 81 (6), pp.1231-1245.e8. ⟨10.1016/j.molcel.2020.12.049⟩. ⟨inserm-03252517⟩
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Anne-Laure Gagez, Franciane Paul, Elina Alaterre, Valérie Gouilleux-Gruart, Edouard Tuaillon, et al.. Angiogenic factors could help us to define patients obtaining complete response with undetectable minimal residual disease in untreated CLL patients treated by FCR: results from the CLL2010FMP, a FILO study. Leukemia & lymphoma, 2021, 62 (13), pp.3160-3169. ⟨10.1080/10428194.2021.1955879⟩. ⟨hal-03640354⟩
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Solenne Gaillard, Virginie Charasson, Cyril Ribeyre, Kader Salifou, Marie-Jeanne Pillaire, et al.. KDM5A and KDM5B histone-demethylases contribute to HU-induced replication stress response and tolerance. Biology Open, 2021, 10 (5), pp.bio057729. ⟨10.1242/bio.057729⟩. ⟨hal-03409388⟩
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Sophie Garnier, Magdalena Harakalova, Stefan Weiss, Michal Mokry, Vera Regitz-Zagrosek, et al.. Genome-wide association analysis in dilated cardiomyopathy reveals two new players in systolic heart failure on chromosomes 3p25.1 and 22q11.23. European Heart Journal, 2021, 42 (20), pp.2000-2011. ⟨10.1093/eurheartj/ehab030⟩. ⟨hal-03567179⟩
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Ilaria Giovannelli, Nadhim Bayatti, Abigail Brown, Dennis Wang, Marius Mickunas, et al.. Amyotrophic lateral sclerosis transcriptomics reveals immunological effects of low-dose interleukin-2. Brain Communications, 2021, 3 (3), pp.fcab141. ⟨10.1093/braincomms/fcab141⟩. ⟨hal-03346504⟩
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Corinne Grey, Bernard de Massy. Chromosome Organization in Early Meiotic Prophase. Frontiers in Cell and Developmental Biology, 2021, 9, ⟨10.3389/fcell.2021.688878⟩. ⟨hal-03417338⟩
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Sahar Hani, Laura Cuyas, Pascale David, David Secco, James Whelan, et al.. Live single-cell transcriptional dynamics via RNA labelling during the phosphate response in plants. Nature Plants, 2021, 7 (8), pp.1050-1064. ⟨10.1038/s41477-021-00981-3⟩. ⟨hal-03320179⟩
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Laurie Herviou, Sara Ovejero, Fanny Izard, Ouissem Karmous-Gadacha, Claire Gourzones, et al.. Targeting the methyltransferase SETD8 impairs tumor cell survival and overcomes drug resistance independently of p53 status in multiple myeloma. Clinical Epigenetics, 2021, 13 (1), ⟨10.1186/s13148-021-01160-z⟩. ⟨hal-03450559⟩
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Verena Hurst, Kiran Challa, Felix Jonas, Romain Forey, Ragna Sack, et al.. A regulatory phosphorylation site on Mec1 controls chromatin occupancy of RNA polymerases during replication stress. EMBO Journal, 2021, 40 (21), pp.e108439. ⟨10.15252/embj.2021108439⟩. ⟨hal-04126959⟩
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Ivana Jerković, Giacomo Cavalli. Understanding 3D genome organization by multidisciplinary methods. Nature Reviews Molecular Cell Biology, 2021, ⟨10.1038/s41580-021-00362-w⟩. ⟨hal-03269159⟩
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Alboukadel Kassambara, Laurie Herviou, Sara Ovejero, Michel Jourdan, Coraline Thibaut, et al.. RNA Sequencing Data-driven Dissection of Human Plasma Cell Differentiation Reveals New Potential Transcription Regulators. Leukemia, 2021, 35 (5), pp.1451-1462. ⟨10.1038/s41375-021-01234-0⟩. ⟨hal-03243729⟩
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Samira Kemiha, Jérôme Poli, Yea-Lih Lin, Armelle Lengronne, Philippe Pasero. Toxic R-loops: Cause or consequence of replication stress?. DNA Repair, 2021, 107, pp.103199. ⟨10.1016/j.dnarep.2021.103199⟩. ⟨hal-03422181⟩
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Klára Klimešová, Jitka Vojáčková, Nenad Radivojević, Franck Vandermoere, Edouard Bertrand, et al.. TSSC4 is a component of U5 snRNP that promotes tri-snRNP formation. Nature Communications, 2021, 12 (1), pp.3646. ⟨10.1038/s41467-021-23934-y⟩. ⟨hal-03413707⟩
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Sylvain Kumanski, Benjamin Viart, Sofia Kossida, María Moriel-Carretero. Lipid Droplets Are a Physiological Nucleoporin Reservoir. Cells, 2021, 10 (2), pp.472. ⟨10.3390/cells10020472⟩. ⟨hal-03346348⟩
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Dhirendra Kumar, Senthilkumar Cinghu, Andrew Oldfield, Pengyi Yang, Raja Jothi. Decoding the function of bivalent chromatin in development and cancer. Genome Research, 2021, pp.gr.275736.121. ⟨10.1101/gr.275736.121⟩. ⟨hal-03422978⟩
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Nadine Laguette, Christelle Langevin, David Olagnier, Vincenzo Torraca, Claire Vanpouille-Box, et al.. Editorial: Nucleic Acid-Associated Inflammation. Frontiers in Immunology, 2021, 12, pp.791580. ⟨10.3389/fimmu.2021.791580⟩. ⟨hal-03596821⟩
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Sylvain Lamure, François van Laethem, Delphine de Verbizier, Claire Lozano, Eve Gehlkopf, et al.. Clinical and Product Features Associated with Outcome of DLBCL Patients to CD19-Targeted CAR T-Cell Therapy. Cancers, 2021, 13 (17), pp.4279. ⟨10.3390/cancers13174279⟩. ⟨hal-03327590⟩
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Yea-Lih Lin, Philippe Pasero. Replication stress: from chromatin to immunity and beyond. Current Opinion in Genetics and Development, 2021, 71, pp.136-142. ⟨10.1016/j.gde.2021.08.004⟩. ⟨hal-03422106⟩
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Giovanna Linguiti, Sofia Kossida, Ciro Leonardo Pierri, Joumana Jabado-Michaloud, Géraldine Folch, et al.. The T Cell Receptor (TRB) Locus in Tursiops truncatus: From Sequence to Structure of the Alpha/Beta Heterodimer in the Human/Dolphin Comparison. Genes, 2021, 12 (4), pp.571. ⟨10.3390/genes12040571⟩. ⟨hal-05524005⟩
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Yaqun Liu, Yea-Lih Lin, Philippe Pasero, Chun-Long Chen. Topoisomerase I prevents transcription-replication conflicts at transcription termination sites. Molecular & Cellular Oncology, 2021, 8 (1), pp.e1843951-3. ⟨10.1080/23723556.2020.1843951⟩. ⟨hal-03083175⟩
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Elena Lo Furno, Isabelle Busseau, Antoine Aze, Claudio Lorenzi, Cima Saghira, et al.. Translesion DNA synthesis-driven mutagenesis in very early embryogenesis of fast cleaving embryos. Nucleic Acids Research, 2021, 50 (2), pp.885 - 898. ⟨10.1093/nar/gkab1223⟩. ⟨hal-03845739⟩
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Claudio Lorenzi, Sylvain Barriere, Katharina Arnold, Reini Luco, Andrew Oldfield, et al.. IRFinder-S: a comprehensive suite to discover and explore intron retention. Genome Biology, 2021, 22 (1), ⟨10.1186/s13059-021-02515-8⟩. ⟨hal-03422973⟩
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Susana Magadan, Stanislas Mondot, Yniv Palti, Guangtu Gao, Marie Paule Lefranc, et al.. Genomic analysis of a second rainbow trout line (Arlee) leads to an extended description of the IGH VDJ gene repertoire. Developmental and Comparative Immunology, 2021, 118, pp.103998. ⟨10.1016/j.dci.2021.103998⟩. ⟨hal-03230900⟩
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Domenico Maiorano, Jana El Etri, Camille Franchet, Jean-Sébastien Hoffmann. Translesion Synthesis or Repair by Specialized DNA Polymerases Limits Excessive Genomic Instability upon Replication Stress. International Journal of Molecular Sciences, 2021, 22 (8), pp.3924. ⟨10.3390/ijms22083924⟩. ⟨hal-05523007⟩
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Benoît Manfroi, Maria de Grandis, Jérôme Moreaux, Sébastien Tabruyn, Jean-François Mayol, et al.. The microenvironment of DLBCL is characterized by noncanonical macrophages recruited by tumor-derived CCL5. Blood Advances, 2021, 5 (21), pp.4338-4351. ⟨10.1182/bloodadvances.2021004203⟩. ⟨hal-04444537⟩
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Claire Marquilly, Germain Busto, Brittany Leger, Ana Boulanger, Edward Giniger, et al.. Htt is a repressor of Abl activity required for APP-induced axonal growth. PLoS Genetics, 2021, 17 (1), pp.e1009287. ⟨10.1371/journal.pgen.1009287⟩. ⟨hal-03249988⟩
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Chloé Maurizy, Claire Abeza, Bénédicte Lemmers, Monica Gabola, Ciro Longobardi, et al.. The HSP90/R2TP assembly chaperone promotes cell proliferation in the intestinal epithelium. Nature Communications, 2021, 12 (1), pp.4810. ⟨10.1038/s41467-021-24792-4⟩. ⟨hal-03322354⟩
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Ondrej Mihola, Vladimir Landa, Florencia Pratto, Kevin Brick, Tatyana Kobets, et al.. Rat PRDM9 shapes recombination landscapes, duration of meiosis, gametogenesis, and age of fertility. BMC Biology, 2021, 19 (1), pp.86. ⟨10.1186/s12915-021-01017-0⟩. ⟨hal-03280705⟩
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Jerome Moreaux. The origin of pre-plasmablastic cells. Blood, 2021, 137 (9), pp.1134-1135. ⟨10.1182/blood.2020009746⟩. ⟨hal-03243758⟩
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Sara Ovejero, Caroline Soulet, María Moriel-Carretero. The Alkylating Agent Methyl Methanesulfonate Triggers Lipid Alterations at the Inner Nuclear Membrane That Are Independent from Its DNA-Damaging Ability. International Journal of Molecular Sciences, 2021, 22 (14), pp.7461. ⟨10.3390/ijms22147461⟩. ⟨hal-03346288⟩
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Heng Pan, Loic Renaud, Ronan Chaligne, Johannes Bloehdorn, Eugen Tausch, et al.. Discovery of candidate DNA methylation cancer driver genes. Cancer Discovery, 2021, pp.candisc.1334.2020. ⟨10.1158/2159-8290.CD-20-1334⟩. ⟨hal-03243749⟩
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Caroline Petitdemange, Nicholas Funderburg, John Zaunders, Pierre Corbeau. Editorial: Infectious Agent-Induced Chronic Immune Activation: Causes, Phenotypes, and Consequences. Frontiers in Immunology, 2021, 12, pp.740556. ⟨10.3389/fimmu.2021.740556⟩. ⟨hal-03616577⟩
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Pascal Philibert, Stéphanie Déjardin, Nelly Pirot, Alain Pruvost, Anvi Laetitia Nguyen, et al.. In the mouse, prostaglandin D2 signalling protects the endometrium against adenomyosis. Molecular Human Reproduction, 2021, 27 (5), ⟨10.1093/molehr/gaab029⟩. ⟨hal-03436852⟩
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Xavier Pichon, Konstadinos Moissoglu, Emeline Coleno, Tianhong Wang, Arthur Imbert, et al.. The kinesin KIF1C transports APC-dependent mRNAs to cell protrusions. RNA, 2021, pp.rna.078576.120. ⟨10.1261/rna.078576.120⟩. ⟨hal-03371977⟩
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Virginia L Pimmett, Matthieu Dejean, Carola Fernandez, Antonio Trullo, Edouard Bertrand, et al.. Quantitative imaging of transcription in living Drosophila embryos reveals the impact of core promoter motifs on promoter state dynamics. Nature Communications, 2021, 12 (1), ⟨10.1038/s41467-021-24461-6⟩. ⟨hal-03382887⟩
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Francis Poulat, Nitzan Gonen. Preface to the Special Issue on The Non-Coding Genome in Sex Determination. Sexual Development, 2021, 15 (5-6), pp.293-294. ⟨10.1159/000520367⟩. ⟨hal-04856135⟩
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Francis Poulat. Non-Coding Genome, Transcription Factors, and Sex Determination. Sexual Development, 2021, 15 (5-6), pp.295-307. ⟨10.1159/000519725⟩. ⟨hal-04870707⟩
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Anne Ramat, Martine Simonelig. Functions of PIWI Proteins in Gene Regulation: New Arrows Added to the piRNA Quiver. Trends in Genetics, 2021, 32 (2), pp.188-200. ⟨10.1016/j.tig.2020.08.011⟩. ⟨hal-03038192⟩
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Sylvia Fenosoa Rasamizafy, Claude Delsert, Gabriel Rabeharivelo, Julien Cau, Nathalie Morin, et al.. Mitotic Acetylation of Microtubules Promotes Centrosomal PLK1 Recruitment and Is Required to Maintain Bipolar Spindle Homeostasis. Cells, 2021, 10 (8), pp.1859. ⟨10.3390/cells10081859⟩. ⟨hal-03346274⟩
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Claire Rempenault, Julie Mielle, Kristina Schreiber, Pierre Corbeau, Laurence Macia, et al.. CXCR5/CXCL13 pathway, a key driver for migration of regulatory B10 cells, is defective in patients with rheumatoid arthritis. Rheumatology, 2021, 61 (5), pp.2185-2196. ⟨10.1093/rheumatology/keab639⟩. ⟨hal-03326805⟩
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Krzysztof Rogowski, Khaled Hached, Carole Crozet, Siem van Der Laan. Tubulin modifying enzymes as target for the treatment of tau-related diseases.. Pharmacology & Therapeutics, 2021, 218, pp.107681. ⟨10.1016/j.pharmthera.2020.107681⟩. ⟨hal-04851104⟩
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Adham Safieddine, Emeline Coleno, Soha Salloum, Arthur Imbert, Abdel-Meneem Traboulsi, et al.. A choreography of centrosomal mRNAs reveals a conserved localization mechanism involving active polysome transport. Nature Communications, 2021, 12 (1), pp.1352. ⟨10.1038/s41467-021-21585-7⟩. ⟨hal-03014936v2⟩
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Kader Salifou, Callum Burnard, Poornima Basavarajaiah, Giuseppa Grasso, Marion Helsmoortel, et al.. Chromatin-associated MRN complex protects highly transcribing genes from genomic instability. Science Advances , 2021, 7 (21), pp.eabb2947. ⟨10.1126/sciadv.abb2947⟩. ⟨hal-03875724⟩
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Youssouf Sereme, Cheick Oumar Guindo, Anne Filleron, Pierre Corbeau, Tu Anh Tran, et al.. Meconial Methanobrevibacter smithii suggests intrauterine methanogen colonization in preterm neonates. Current Research in Microbial Sciences, 2021, 2, pp.100034. ⟨10.1016/j.crmicr.2021.100034⟩. ⟨hal-03619604⟩
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Abhishek Bharadwaj Sharma, Hélène Erasimus, Lia Pinto, Marie-Christine Caron, Diyavarshini Gopaul, et al.. XAB2 promotes Ku eviction from single-ended DNA double-strand breaks independently of the ATM kinase. Nucleic Acids Research, 2021, 49 (17), pp.9906-9925. ⟨10.1093/nar/gkab785⟩. ⟨hal-03371180⟩
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Igor Stuparevic, Ana Novacic, A.R. Rahmouni, Anne Fernandez, Ned J. Lamb, et al.. Regulation of the conserved 3 '-5 ' exoribonuclease EXOSC10/Rrp6 during cell division, development and cancer. Biological Reviews, 2021, 96 (4), pp.1092-1113. ⟨10.1111/brv.12693⟩. ⟨hal-03162335⟩
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David Miguel Susano Pinto, Mick Phillips, Nicholas Hall, Julio Mateos-Langerak, Danail Stoychev, et al.. Python-Microscope – a new open-source Python library for the control of microscopes. Journal of Cell Science, 2021, 134 (19), pp.jcs258955. ⟨10.1242/jcs.258955⟩. ⟨hal-05500590⟩
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Clara Taffoni, Alizée Steer, Johanna Marines, Hanane Chamma, Isabelle Vila, et al.. Nucleic Acid Immunity and DNA Damage Response: New Friends and Old Foes. Frontiers in Immunology, 2021, 12, pp.660560. ⟨10.3389/fimmu.2021.660560⟩. ⟨hal-03380383v2⟩
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Katjana Tantale, Encar Garcia-Oliver, Marie-Cécile Robert, Adèle L’hostis, Yueyuxiao Yang, et al.. Stochastic pausing at latent HIV-1 promoters generates transcriptional bursting. Nature Communications, 2021, 12 (1), pp.4503. ⟨10.1038/s41467-021-24462-5⟩. ⟨hal-03382893⟩
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Hervé Técher, Philippe Pasero. The Replication Stress Response on a Narrow Path Between Genomic Instability and Inflammation. Frontiers in Cell and Developmental Biology, 2021, 9, pp.18. ⟨10.3389/fcell.2021.702584⟩. ⟨hal-05524155⟩
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Rachel Topno, Nazia Nazam, Pallawi Kumari, Manoj Kumar, Pallavi Agarwal. Integrative genome wide analysis of protein tyrosine phosphatases identifies CDC25C as prognostic and predictive marker for chemoresistance in breast cancer. Cancer Biomarkers, 2021, 32 (4), pp.491-504. ⟨10.3233/CBM-200858⟩. ⟨hal-05524829⟩
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Alba Torán-Vilarrubias, María Moriel-Carretero. Oxidative agents elicit endoplasmic reticulum morphological changes suggestive of alterations in lipid metabolism. microPublication biology, 2021, ⟨10.17912/micropub.biology.000462⟩. ⟨hal-03356042⟩
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Cassiana Trandafir, Shridevi Sandiramourty, Sabine Laurent-Chabalier, Adrien ter Schiphorst, Hai Son Nguyen, et al.. Brain Infarction MRI Pattern in Stroke Patients with Intracardiac Thrombus. Cerebrovascular Diseases, 2021, 50 (5), pp.581-587. ⟨10.1159/000515707⟩. ⟨hal-03636814⟩
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Johannes Trück, Anne Eugster, Pierre Barennes, Christopher M Tipton, Eline T Luning Prak, et al.. Biological controls for standardization and interpretation of adaptive immune receptor repertoire profiling. eLife, 2021, 10, ⟨10.7554/eLife.66274⟩. ⟨hal-03239654⟩
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Natsuko Ueda, Marine Cahen, Yannic Danger, Jérôme Moreaux, Christophe Sirac, et al.. Immunotherapy perspectives in the new era of B-cell editing. Blood Advances, 2021, 5 (6), pp.1770-1779. ⟨10.1182/bloodadvances.2020003792⟩. ⟨hal-03202338⟩
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Gema Villa-Fombuena, María Lobo-Pecellín, Miriam Marín-Menguiano, Patricia Rojas-Ríos, Acaimo González-Reyes. Live imaging of the Drosophila ovarian niche shows spectrosome and centrosome dynamics during asymmetric germline stem cell division. Development (Cambridge, England), 2021, 148 (18), ⟨10.1242/dev.199716⟩. ⟨hal-03426316⟩
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Jean-Philippe Villemin, Claudio Lorenzi, Marie-Sarah Cabrillac, Andrew Oldfield, William Ritchie, et al.. A cell-to-patient machine learning transfer approach uncovers novel basal-like breast cancer prognostic markers amongst alternative splice variants. BMC Biology, 2021, 19 (1), ⟨10.1186/s12915-021-01002-7⟩. ⟨hal-03422983⟩
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Guangying Wang, Lu Fu, Jie Xiong, Kazufumi Mochizuki, Yunxin Fu, et al.. Identification and Characterization of Base-Substitution Mutations in the Macronuclear Genome of the Ciliate Tetrahymena thermophila. Genome Biology and Evolution, 2021, 13 (1), pp.evaa232. ⟨10.1093/gbe/evaa232⟩. ⟨hal-03854214⟩
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Mehwish Younas, Christina Psomas, Christelle Reynes, Renaud Cezar, Lucy Kundura, et al.. Residual viremia is linked to a specific immune activation profile in HIV-1-infected adults under efficient antiretroviral therapy. Frontiers in Immunology, 2021, 12, pp.663843. ⟨10.3389/fimmu.2021.663843⟩. ⟨hal-03205174⟩
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Journal articles

2020

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Ildem Akerman, Bahar Kasaai, Alina Bazarova, Pau Biak Sang, Isabelle Peiffer, et al.. A predictable conserved DNA base composition signature defines human core DNA replication origins. Nature Communications, 2020, 11, pp.4826. ⟨10.1038/s41467-020-18527-0⟩. ⟨hal-02945610⟩
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Jaafar Alomairi, Anne Molitor, Nori Sadouni, Saadat Hussain, Magali Torres, et al.. Integration of high-throughput reporter assays identify a critical enhancer of the Ikzf1 gene. PLoS ONE, 2020, 15 (5), pp.e0233191. ⟨10.1371/journal.pone.0233191⟩. ⟨hal-02773600⟩
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Rachele Antonacci, Serafina Massari, Giovanna Linguiti, Anna Caputi Jambrenghi, Francesco Giannico, et al.. Evolution of the T-Cell Receptor (TR) Loci in the Adaptive Immune Response: The Tale of the TRG Locus in Mammals. Genes, 2020, 11 (6), pp.624. ⟨10.3390/genes11060624⟩. ⟨hal-05508887⟩
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Hyun Jin Bae, Marion Dubarry, Jongcheol Jeon, Luís M Soares, Catherine Dargemont, et al.. The Set1 N-terminal domain and Swd2 interact with RNA polymerase II CTD to recruit COMPASS. Nature Communications, 2020, 11 (1), pp.2181. ⟨10.1038/s41467-020-16082-2⟩. ⟨inserm-02617416⟩
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Amandine Barral, Jérome Déjardin. Telomeric Chromatin and TERRA. Journal of Molecular Biology, 2020, 432, pp.4244 - 4256. ⟨10.1016/j.jmb.2020.03.003⟩. ⟨hal-03491403⟩
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J. Basbous, Antoine Aze, Laurent Chaloin, Rana Lebdy, Dana Hodroj, et al.. Dihydropyrimidinase protects from DNA replication stress caused by cytotoxic metabolites. Nucleic Acids Research, 2020, 48 (4), pp.1886-1904. ⟨10.1093/nar/gkz1162⟩. ⟨hal-02556387⟩
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Eugenia Basyuk, Florence Rage, Edouard Bertrand. RNA transport from transcription to localized translation: a single molecule perspective. RNA Biology, 2020, 23 (1), pp.100809. ⟨10.1080/15476286.2020.1842631⟩. ⟨hal-02995954⟩
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Juliette Bertrand-Delepine, Sylvie Manouvrier-Hanu, Maryse Cartigny, Françoise Paris, Delphine Mallet, et al.. In cases of familial primary ovarian insufficiency and disorders of gonadal development, consider NR5A1/SF-1 sequence variants. Reproductive BioMedicine Online, 2020, 40 (1), pp.151-159. ⟨10.1016/j.rbmo.2019.10.002⟩. ⟨hal-02861041⟩
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Anna Biernacka, Magdalena Skrzypczak, Yingjie Zhu, Philippe Pasero, Maga Rowicka, et al.. High-resolution, ultrasensitive and quantitative DNA double-strand break labeling in eukaryotic cells using i-BLESS. Nature Protocols, 2020, 16 (2), pp.1034-1061. ⟨10.1038/s41596-020-00448-3⟩. ⟨hal-05524855⟩
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Mathilde Biot, Bernard de Massy. Reading the epigenetic code for exchanging DNA. eLife, 2020, 9, ⟨10.7554/eLife.61820⟩. ⟨hal-03048701⟩
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Lucile Broseus, William Ritchie. Challenges in detecting and quantifying intron retention from next generation sequencing data. Computational and Structural Biotechnology Journal, 2020, 18, pp.501-508. ⟨10.1016/j.csbj.2020.02.010⟩. ⟨hal-05506498⟩
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Lucile Broseus, Aubin Thomas, Andrew Oldfield, Dany Severac, Emeric Dubois, et al.. TALC: Transcript-level Aware Long-read Correction. Bioinformatics, 2020, 36 (20), pp.5000-5006. ⟨10.1093/bioinformatics/btaa634⟩. ⟨hal-03070194⟩
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Vo-Minh-Hoang Bui, Clément Mettling, Jonathan Jou, H Sunny Sun. Genomic amplification of chromosome 20q13.33 is the early biomarker for the development of sporadic colorectal carcinoma. BMC Medical Genomics, 2020, 13, ⟨10.1186/s12920-020-00776-z⟩. ⟨hal-03078496⟩
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William Camu, Marius Mickunas, Jean-Luc Veyrune, Christine Payan, Cecilia Garlanda, et al.. Repeated 5-day cycles of low dose aldesleukin in amyotrophic lateral sclerosis (IMODALS): A phase 2a randomised, double-blind, placebo-controlled trial. EBioMedicine, 2020, 59, pp.102844. ⟨10.1016/j.ebiom.2020.102844⟩. ⟨hal-02988016⟩
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Sebastian Canzler, Jana Schor, Wibke Busch, Kristin Schubert, Ulrike E Rolle-Kampczyk, et al.. Prospects and challenges of multi-omics data integration in toxicology. Archives of Toxicology, 2020, 94, pp.371 - 388. ⟨10.1007/s00204-020-02656-y⟩. ⟨hal-03032487⟩
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Renaud Cezar, Audrey Winter, Delphine Desigaud, Manuela Pastore, Lucy Kundura, et al.. Identification of distinct immune activation profiles in adult humans. Scientific Reports, 2020, 10 (1), pp.20824. ⟨10.1038/s41598-020-77707-6⟩. ⟨hal-03052544⟩
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Fabrice Chatonnet, Amandine Pignarre, Aurelien Serandour, Gersende Caron, Stéphane Avner, et al.. The hydroxymethylome of multiple myeloma identifies FAM72D as a 1q21 marker linked to proliferation. Haematologica, 2020, 105 (3), pp.774-783. ⟨10.3324/haematol.2019.222133⟩. ⟨hal-02165596⟩
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Satish Sati, Boyan Bonev, Quentin Szabo, Daniel Jost, Paul Bensadoun, et al.. 4D Genome Rewiring during Oncogene-Induced and Replicative Senescence. Molecular Cell, 2020, 78 (3), pp.522-538.e9. ⟨10.1016/j.molcel.2020.03.007⟩. ⟨hal-02990970⟩
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Youssouf Sereme, Moïse Michel, Soraya Mezouar, S. Pinchemel, C. Chartier, et al.. Non-invasive immunological exploration of the premature newborn infant. Allergy, 2020, 75 (109, SI), pp.185-186. ⟨10.1111/all.14506⟩. ⟨hal-03149731⟩
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Quentin Szabo, Axelle Donjon, Ivana Jerković, Giorgio Papadopoulos, Thierry Cheutin, et al.. Regulation of single-cell genome organization into TADs and chromatin nanodomains. Nature Genetics, 2020, 52 (11), pp.1151-1157. ⟨10.1038/s41588-020-00716-8⟩. ⟨hal-02991051v2⟩
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Winnie Tan, Vincent Murphy, Aude Charron, Sylvie van Twest, Michael Sharp, et al.. Preparation and purification of mono-ubiquitinated proteins using Avi-tagged ubiquitin. PLoS ONE, 2020, 15 (2), pp.e0229000. ⟨10.1371/journal.pone.0229000⟩. ⟨hal-04021575⟩
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Claudia Terraza-Aguirre, Mauricio Campos-Mora, Roberto Elizondo-Vega, Rafael Contreras-López, Patricia Luz-Crawford, et al.. Mechanisms behind the Immunoregulatory Dialogue between Mesenchymal Stem Cells and Th17 Cells. Cells, 2020, 9 (7), pp.1660. ⟨10.3390/cells9071660⟩. ⟨hal-03594110⟩
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Tu Anh Tran, Renaud Cezar, Julien Frandon, Sarah Kabani, Pierre Corbeau. CT scan does not make a diagnosis of Covid-19: A cautionary case report. International Journal of Infectious Diseases, 2020, 100, pp.182 - 183. ⟨10.1016/j.ijid.2020.08.073⟩. ⟨hal-03492151⟩
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Juliette van Dijk, Guillaume Bompard, Gabriel Rabeharivelo, Julien Cau, Claude Delsert, et al.. PAK1 Regulates MEC-17 Acetyltransferase Activity and Microtubule Acetylation during Proplatelet Extension. International Journal of Molecular Sciences, 2020, ⟨10.3390/ijms21207531⟩. ⟨hal-03019790⟩
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Gerlinde Vansant, Heng-Chang Chen, Eduard Zorita, Katerina Trejbalová, Dalibor Miklík, et al.. The chromatin landscape at the HIV-1 provirus integration site determines viral expression. Nucleic Acids Research, 2020, 48 (14), pp.7801 - 7817. ⟨10.1093/nar/gkaa536⟩. ⟨hal-05506441⟩
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Emmanuel Varlet, Sara Ovejero, Anne-Marie Martinez, Giacomo Cavalli, Jerome Moreaux. Role of Polycomb Complexes in Normal and Malignant Plasma Cells. International Journal of Molecular Sciences, 2020, 21 (21), pp.8047. ⟨10.3390/ijms21218047⟩. ⟨hal-03243763⟩
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Michiel Vermeulen, Jérôme Déjardin. Locus-specific chromatin isolation. Nature Reviews Molecular Cell Biology, 2020, 21 (5), pp.249-250. ⟨10.1038/s41580-020-0217-0⟩. ⟨hal-05529595⟩
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Isabelle K Vila, Maxence Fretaud, Dimitrios Vlachakis, Nadine Laguette, Christelle Langevin. Animal Models for the Study of Nucleic Acid Immunity: Novel Tools and New Perspectives. Journal of Molecular Biology, 2020, 432 (20), pp.5529-5543. ⟨10.1016/j.jmb.2020.08.016⟩. ⟨hal-02989107⟩
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Orianne Villard, Mathieu Armanet, Guilhem Couderc, Claire Bony, Jerome Moreaux, et al.. Characterization of immortalized human islet stromal cells reveals a MSC-like profile with pancreatic features. Stem Cell Research and Therapy, 2020, 11, pp.158. ⟨10.1186/s13287-020-01649-z⟩. ⟨hal-02961501⟩
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Dimitrios Vlachakis, Louis Papageorgiou, Ariadne Papadaki, Maria Georga, Sofia Kossida, et al.. An updated evolutionary study of the Notch family reveals a new ancient origin and novel invariable motifs as potential pharmacological targets. PeerJ, 2020, 8, pp.e10334. ⟨10.7717/peerj.10334⟩. ⟨hal-05529987⟩
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Karin Voordeckers, Camilla Colding, Lavinia Grasso, Benjamin Pardo, Lore Hoes, et al.. Ethanol exposure increases mutation rate through error-prone polymerases. Nature Communications, 2020, 11 (1), ⟨10.1038/s41467-020-17447-3⟩. ⟨hal-03028506⟩
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Zhong-Yi Wang, Evgeny Leushkin, Angélica Liechti, Svetlana Ovchinnikova, Katharina Mössinger, et al.. Transcriptome and translatome co-evolution in mammals. Nature, 2020, 588, pp.642-647. ⟨10.1038/s41586-020-2899-z⟩. ⟨hal-03048719⟩
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Matthew Wood, Annabel Quinet, Yea-Lih Lin, Albert Davis, Philippe Pasero, et al.. TDP-43 dysfunction results in R-loop accumulation and DNA replication defects. Journal of Cell Science, 2020, 133 (20), pp.jcs244129. ⟨10.1242/jcs.244129⟩. ⟨hal-03083178⟩
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Journal articles

2019

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Laurence Amar, Hervé Seitz. Editorial: miRNA Regulatory Pathways in Metazoans. Advances From in vivo and ex vivo Studies. Frontiers in Genetics, 2019, 10, ⟨10.3389/fgene.2019.00147⟩. ⟨hal-02366338⟩
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Carole Ayoub Moubareck, Dalal Hammoudi Halat, Charbel Akkawi, Anju Nabi, Mouza Alsharhan, et al.. Role of outer membrane permeability, efflux mechanism, and carbapenemases in carbapenem-nonsusceptible Pseudomonas aeruginosa from Dubai hospitals: Results of the first cross-sectional survey. International Journal of Infectious Diseases, 2019, 84, pp.143-150. ⟨10.1016/j.ijid.2019.04.027⟩. ⟨hal-05107297⟩
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Jihane Basbous, Angelos Constantinou. A tumor suppressive DNA translocase named FANCM. Critical Reviews in Biochemistry and Molecular Biology, 2019, 54 (1), pp.27-40. ⟨10.1080/10409238.2019.1568963⟩. ⟨hal-04129225⟩
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Frédéric Baudat, Bernard de Massy, Frederic Veyrunes. Sex chromosome quadrivalents in oocytes of the African pygmy mouse Mus minutoides that harbors non-conventional sex chromosomes. Chromosoma Biology of the Nucleus, 2019, 128 (3), pp.397-411. ⟨10.1007/s00412-019-00699-4⟩. ⟨hal-02353265⟩
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Karl Bauer, Inmaculada Segura, Imre Gaspar, Volker Scheuss, Christin Illig, et al.. Live cell imaging reveals 3′-UTR dependent mRNA sorting to synapses. Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-019-11123-x⟩. ⟨hal-02343509⟩
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Milena Bazlekowa-Karaban, Paulina Prorok, Sonia Baconnais, Sabira Taipakova, Zhiger Akishev, et al.. Mechanism of stimulation of DNA binding of the transcription factors by human apurinic/apyrimidinic endonuclease 1, APE1. DNA Repair, 2019, 82, pp.102698. ⟨10.1016/j.dnarep.2019.102698⟩. ⟨hal-02322130⟩
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Susanne Beck, Martina Emde, Jerome Moreaux, Anja Seckinger, Dirk Hose. Prediction of Malingant Plasma Cell Biology Related Survival in AL-Amyloidosis. Blood, 2019, 134 (Supplement_1), pp.3078-3078. ⟨10.1182/blood-2019-131161⟩. ⟨hal-05530335⟩
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Julien Bianco, Valérie Bergoglio, Yea-Lih Lin, Marie-Jeanne Pillaire, Anne-Lyne Schmitz, et al.. Overexpression of Claspin and Timeless protects cancer cells from replication stress in a checkpoint-independent manner. Nature Communications, 2019, 10 (1), pp.910. ⟨10.1038/s41467-019-08886-8⟩. ⟨hal-02047561⟩
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Miriam Candelas, Ana Reynders, Margarita Arango-Lievano, Christoph Neumayer, Antoine Fruquière, et al.. Cav3.2 T-type calcium channels shape electrical firing in mouse Lamina II neurons. Scientific Reports, 2019, 9 (1), pp.3112. ⟨10.1038/s41598-019-39703-3⟩. ⟨hal-02356250⟩
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Andrés M Cardozo Gizzi, Diego Cattoni, Jean-Bernard Fiche, Sergio Martin Espinola, Julian Gurgo, et al.. Microscopy-Based Chromosome Conformation Capture Enables Simultaneous Visualization of Genome Organization and Transcription in Intact Organisms. Molecular Cell, 2019, 74 (1), pp.212-222.e5. ⟨10.1016/j.molcel.2019.01.011⟩. ⟨hal-05521119⟩
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Giacomo Cavalli, Edith Heard. Advances in epigenetics link genetics to the environment and disease. Nature, 2019, 571 (7766), pp.489-499. ⟨10.1038/s41586-019-1411-0⟩. ⟨hal-02367550⟩
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Eve Combès, Augusto Andrade, Diego Tosi, Henri-Alexandre Michaud, Flavie Coquel, et al.. Inhibition of Ataxia-Telangiectasia Mutated and RAD3-Related ( ATR ) Overcomes Oxaliplatin Resistance and Promotes Antitumor Immunity in Colorectal Cancer. Cancer Research, 2019, 79 (11), pp.2933-2946. ⟨10.1158/0008-5472.CAN-18-2807⟩. ⟨hal-02361669⟩
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Flavie Coquel, Christoph Neumayer, Yea-Lih Lin, Philippe Pasero. SAMHD1 and the innate immune response to cytosolic DNA during DNA replication. Current Opinion in Immunology, 2019, 56, pp.24 - 30. ⟨10.1016/j.coi.2018.09.017⟩. ⟨hal-01904685⟩
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Philippe Coulombe, Joelle Nassar, Isabelle Peiffer, Slavica Stanojcic, Yvon Sterkers, et al.. The ORC ubiquitin ligase OBI1 promotes DNA replication origin firing. Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-019-10321-x⟩. ⟨hal-02408667⟩
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Kim de Veirman, Eline Menu, Ken Maes, Nathan de Beule, Eva de Smedt, et al.. Myeloid-derived suppressor cells induce multiple myeloma cell survival by activating the AMPK pathway. Cancer Letters, 2019, 442, pp.233-241. ⟨10.1016/j.canlet.2018.11.002⟩. ⟨hal-01980419⟩
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Thaddeus Deiss, Melissa Vadnais, Feng Wang, Patricia Chen, Ali Torkamani, et al.. Immunogenetic factors driving formation of ultralong VH CDR3 in Bos taurus antibodies. Cellular and molecular immunology, 2019, 16 (1), pp.53-64. ⟨10.1038/cmi.2017.117⟩. ⟨hal-02048438⟩
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Alexandra Despang, Robert Schöpflin, Martin Franke, Salaheddine Ali, Ivana Jerković, et al.. Functional dissection of the Sox9–Kcnj2 locus identifies nonessential and instructive roles of TAD architecture. Nature Genetics, 2019, 51 (8), pp.1263-1271. ⟨10.1038/s41588-019-0466-z⟩. ⟨hal-05486069⟩
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Julie Devin, Alboukadel Kassambara, Angelique Bruyer, Jérôme Moreaux, Caroline Bret. Phenotypic Characterization of Diffuse Large B-Cell Lymphoma Cells and Prognostic Impact. Journal of Clinical Medicine, 2019, 8 (7), pp.1074. ⟨10.3390/jcm8071074⟩. ⟨hal-02571739⟩
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Julie Devin, Tatiana Cañeque, Yea-Lih Lin, Guillaume Cartron, Philippe Pasero, et al.. Ironomycin Induces Diffuse Large B-Cell Lymphoma Cell Death By Targeting Iron Metabolism Addiction. Blood, 2019, 134 (Supplement_1), pp.3960-3960. ⟨10.1182/blood-2019-129954⟩. ⟨hal-05529967⟩
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Martina Emde, Susanne Beck, Vladimir Benes, Jerome Moreaux, Anja Seckinger, et al.. RNA-Sequencing Based Assessment of Targets, Risk and Long Term Survival for Personalized Treatment of Multiple Myeloma. Blood, 2019, 134 (Supplement_1), pp.1801-1801. ⟨10.1182/blood-2019-131159⟩. ⟨hal-05529873⟩
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Elodie Fiot, Delphine Zenaty, Priscilla Boizeau, Jérémie Haignere, Sophie dos Santos, et al.. X chromosome gene dosage as a determinant of congenital malformations and of age-related comorbidity risk in patients with Turner syndrome, from childhood to early adulthood. European Journal of Endocrinology, 2019, 180 (6), pp.397-406. ⟨10.1530/EJE-18-0878⟩. ⟨hal-02863454⟩
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Camilla Frattini, Rodrigo Bermejo. Analysis of Cohesin Association to Newly Replicated DNA Through Nascent Strand Binding Assay (NSBA). SMC Complexes, 2019, Methods in Molecular Biology, 2004, pp.139-153. ⟨10.1007/978-1-4939-9520-2_11⟩. ⟨hal-05510065⟩
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Olivier Ganier, Paulina Prorok, Ildem Akerman, Marcel Méchali. Metazoan DNA replication origins. Current Opinion in Cell Biology, 2019, 58, pp.134-141. ⟨10.1016/j.ceb.2019.03.003⟩. ⟨hal-05296369⟩
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Vincent Gatinois, Nicole Bigi, Eve Mousty, Jean Chiesa, Yuri Musizzano, et al.. Mosaic complete tetrasomy 21 in a fetus with complete atrioventricular septal defect and minor morphological variations. Molecular Genetics & Genomic Medicine, 2019, 7 (11), pp.e00895. ⟨10.1002/mgg3.895⟩. ⟨hal-02562012⟩
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Mathilde Gauchier, Sophie Kan, Amandine Barral, Sandrine Sauzet, Eneritz Agirre, et al.. SETDB1-dependent heterochromatin stimulates alternative lengthening of telomeres. Science Advances , 2019, 5 (5), pp.eaav3673. ⟨10.1126/sciadv.aav3673⟩. ⟨hal-02350110⟩
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Claire Gourzones, Caroline Bret, Jérôme Moreaux. Treatment May Be Harmful: Mechanisms/Prediction/Prevention of Drug-Induced DNA Damage and Repair in Multiple Myeloma. Frontiers in Genetics, 2019, 10, pp.861. ⟨10.3389/fgene.2019.00861⟩. ⟨hal-02552817⟩
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Claire Gourzones, Céline Bellanger, Sylvain Lamure, Ouissem Karmous Gadacha, Elvira Garcia de Paco, et al.. Antioxidant Defenses Confer Resistance to High Dose Melphalan in Multiple Myeloma Cells. Cancers, 2019, 11 (4), pp.439. ⟨10.3390/cancers11040439⟩. ⟨hal-02870153⟩
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Claire Guissart, Frédéric Tran mau them, Vanessa Debant, Victoria Viart, Charlotte Dubucs, et al.. A Broad Test Based on Fluorescent-Multiplex PCR for Noninvasive Prenatal Diagnosis of Cystic Fibrosis. Fetal Diagnosis and Therapy, 2019, 45 (6), pp.403-412. ⟨10.1159/000489776⟩. ⟨hal-02434874⟩
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Laurie Herviou, Michel Jourdan, Anne-Marie Martinez, Giacomo Cavalli, Jerome Moreaux. EZH2 is overexpressed in transitional preplasmablasts and is involved in human plasma cell differentiation. Leukemia, 2019, 33 (8), pp.2047-2060. ⟨10.1038/s41375-019-0392-1⟩. ⟨hal-03243777⟩
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Laurie Herviou, Fanny Izard, Ouissem Karmous-Gadacha, Claire Gourzones, Celine Bellanger, et al.. Targeting the methyltransferase SETD8 impairs tumor cell survival and overcomes drug resistance independently of p53 status in multiple myeloma. BioRxiv, In press, ⟨10.1101/776930⟩. ⟨hal-02355848⟩
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Dirk Hose, Susanne Beck, Hans Salwender, Martina Emde, Uta Bertsch, et al.. Prospective target assessment and multimodal prediction of survival for personalized and risk-adapted treatment strategies in multiple myeloma in the GMMG-MM5 multicenter trial. Journal of Hematology and Oncology, 2019, 12, pp.65. ⟨10.1186/s13045-019-0750-5⟩. ⟨hal-03243769⟩
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Pascale Jolivet, Kamar Serhal, Marco Graf, Stephan Eberhard, Zhou Xu, et al.. A subtelomeric region affects telomerase-negative replicative senescence in Saccharomyces cerevisiae. Scientific Reports, 2019, 9 (1), pp.1845. ⟨10.1038/s41598-018-38000-9⟩. ⟨hal-02325822⟩
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Gonzague Jourdain, Antoni Soriano-Arandes, Intira Collins, Laura Marqués, Elena Chiappini, et al.. Prevalence and clinical outcomes of poor immune response despite virologically suppressive antiretroviral therapy among children and adolescents with human immunodeficiency virus in Europe and Thailand: cohort study *. Clinical Infectious Diseases, 2019, 70 (3), pp.404-415. ⟨10.1093/cid/ciz253⟩. ⟨hal-02549056⟩
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Michel Jourdan, Hugues de Boussac, Elena Viziteu, Alboukadel Kassambara, Jérôme Moreaux. In Vitro Differentiation Model of Human Normal Memory B Cells to Long-lived Plasma Cells. Journal of visualized experiments : JoVE, 2019, 143, ⟨10.3791/58929⟩. ⟨hal-05510019⟩
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Nicolas Kalfa, Laura Gaspari, Margot Ollivier, Pascal Philibert, Anne Bergougnoux, et al.. Molecular genetics of hypospadias and cryptorchidism recent developments. Clinical Genetics, 2019, 95 (1), pp.122-131. ⟨10.1111/cge.13432⟩. ⟨hal-02421447⟩
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Chames Kermi, Antoine Aze, Domenico Maiorano. Preserving Genome Integrity during the Early Embryonic DNA Replication Cycles. Genes, 2019, 10 (5), pp.398. ⟨10.3390/genes10050398⟩. ⟨hal-03403434⟩
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Emmanuelle Lagrue, Celine Dogan, Marie de Antonio, Frédérique Audic, Nathalie Bach, et al.. A large multicenter study of pediatric myotonic dystrophy type 1 for evidence-based management. Neurology, 2019, 92 (8), pp.e852-e865. ⟨10.1212/WNL.0000000000006948⟩. ⟨hal-02097112⟩
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Ned J Lamb, Florence Gizard. Dietary apigenin in the prevention of endothelial cell dysfunction. Journal of Cardiovascular Pharmacology, 2019, 74 (6), pp.513-515. ⟨10.1097/FJC.0000000000000743⟩. ⟨hal-02389407⟩
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Marie-Paule Lefranc, Gérard Lefranc. IMGT® and 30 Years of Immunoinformatics Insight in Antibody V and C Domain Structure and Function. Antibodies, 2019, 8 (2), pp.29. ⟨10.3390/antib8020029⟩. ⟨hal-05529728⟩
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S. Lehmann, C. Paquet, C. Malaplate-Armand, E. Magnin, S. Schraen, et al.. Diagnosis associated with Tau higher than 1200 pg/mL: Insights from the clinical and laboratory practice. Clinica Chimica Acta, 2019, 495, pp.451-456. ⟨10.1016/j.cca.2019.04.081⟩. ⟨hal-02861688⟩
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Vincent Loubiere, Anne-Marie Martinez, Giacomo Cavalli. Cell Fate and Developmental Regulation Dynamics by Polycomb Proteins and 3D Genome Architecture. BioEssays, 2019, 41 (3), pp.e1800222. ⟨10.1002/bies.201800222⟩. ⟨hal-05529679⟩
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Malik Lutzmann, Florence F. Bernex, Cindy da Costa de Jesus, Dana Hodroj, Caroline Marty, et al.. MCM8-and MCM9 Deficiencies Cause Lifelong Increased Hematopoietic DNA Damage Driving p53- Dependent Myeloid Tumors. Cell Reports, 2019, 28 (11), pp.2851 - 2865. ⟨10.1016/j.celrep.2019.07.095⟩. ⟨hal-02397140⟩
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Anke Maes, Ken Maes, Philip Vlummens, Hendrik de Raeve, Julie Devin, et al.. Maternal embryonic leucine zipper kinase is a novel target for diffuse large B cell lymphoma and mantle cell lymphoma. Blood Cancer Journal, 2019, 9 (12), ⟨10.1038/s41408-019-0249-x⟩. ⟨hal-02542010⟩
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Anke Maes, Ken Maes, Hendrik de Raeve, Eva de Smedt, Philip Vlummens, et al.. The Anaphase-Promoting Complex/Cyclosome: A New Promising Target in Diffuse Large B-cell Lymphoma and Mantle Cell Lymphoma. British Journal of Cancer, 2019, 120 (12), pp.1137--1146. ⟨10.1038/s41416-019-0471-0⟩. ⟨hal-02862214⟩
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Susana Magadan, Aleksei Krasnov, Saida Hadi-Saljoqi, Sergey Afanasyev, Stanislas Mondot, et al.. Standardized IMGT® Nomenclature of Salmonidae IGH Genes, the Paradigm of Atlantic Salmon and Rainbow Trout: From Genomics to Repertoires. Frontiers in Immunology, 2019, 10, ⟨10.3389/fimmu.2019.02541⟩. ⟨hal-02867815⟩
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Alberto Malerba, Fanny N Roth, Pradeep Harish, Jamila Dhiab, Ngoc Lu-Nguyen, et al.. Pharmacological modulation of the ER stress response ameliorates oculopharyngeal muscular dystrophy. Human Molecular Genetics, 2019, ⟨10.1093/hmg/ddz007⟩. ⟨hal-02364803⟩
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Laurent Meertens, Mohamed Lamine Hafirassou, Thérèse Couderc, Lucie Bonnet-Madin, Vasiliya Kril, et al.. FHL1 is a major host factor for chikungunya virus infection. Nature, 2019, 574 (7777), pp.259-263. ⟨10.1038/s41586-019-1578-4⟩. ⟨inserm-02355424v2⟩
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Warda Meziane, Zineb Mekkaoui, Ismahane Hai, Kamila Kacimi, Khuira Djilali, et al.. Combination of metformin with sodium selenite induces a functional phenotypic switch of human GM-CSF monocyte-derived macrophages. International Immunopharmacology, 2019, 73, pp.212-224. ⟨10.1016/j.intimp.2019.05.004⟩. ⟨hal-02383226⟩
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Kamran Moradkhani, Laurence Cuisset, Pierre Boisseau, Olivier Pichon, Marine Lebrun, et al.. Risk estimation of uniparental disomy of chromosome 14 or 15 in a fetus with a parent carrying a non‐homologous Robertsonian translocation. Should we still perform prenatal diagnosis?. Prenatal Diagnosis, 2019, 39 (11), pp.986-992. ⟨10.1002/pd.5518⟩. ⟨hal-02343373⟩
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Jérôme Moreaux. Anticorps anti-CD38 dans le myélome multiple. Médecine/Sciences, 2019, 35 (12), pp.1001-1004. ⟨10.1051/medsci/2019198⟩. ⟨hal-03243767⟩
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S Moreno, Cf Perno, Pw Mallon, G Behrens, Pierre Corbeau, et al.. Two-drug vs . three-drug combinations for HIV-1: Do we have enough data to make the switch?. HIV Medicine, 2019, 20, pp.2-12. ⟨10.1111/hiv.12716⟩. ⟨hal-02933651⟩
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Elise Morlet, Jean-François Costemale-Lacoste, Emmanuel Poulet, Kibby Mcmahon, Nicolas Hoertel, et al.. Psychiatric and physical outcomes of long-term use of lithium in older adults with bipolar disorder and major depressive disorder: A cross-sectional multicenter study. Journal of Affective Disorders, 2019, 259, pp.210-217. ⟨10.1016/j.jad.2019.08.056⟩. ⟨hal-02800241⟩
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Masatoshi Mutazono, Tomoko Noto, Kazufumi Mochizuki. Diversification of small RNA amplification mechanisms for targeting transposon-related sequences in ciliates. Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (29), pp.14639-14644. ⟨10.1073/pnas.1903491116⟩. ⟨hal-02387371⟩
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Jadwiga Nieminuszczy, Ronan Broderick, Marina A Bellani, Elizabeth Smethurst, Rebekka A Schwab, et al.. EXD2 Protects Stressed Replication Forks and Is Required for Cell Viability in the Absence of BRCA1/2. Molecular Cell, 2019, 75, pp.605 - 619. ⟨10.1016/j.molcel.2019.05.026⟩. ⟨hal-03083184⟩
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Mats Ohlin, Cathrine Scheepers, Martin Corcoran, William D Lees, Christian E Busse, et al.. Inferred Allelic Variants of Immunoglobulin Receptor Genes: A System for Their Evaluation, Documentation, and Naming. Frontiers in Immunology, 2019, 10, ⟨10.3389/fimmu.2019.00435⟩. ⟨hal-04113521⟩
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Koustav Pal, Mattia Forcato, Daniel Jost, Thomas Sexton, Cédric Vaillant, et al.. Global chromatin conformation differences in the Drosophila dosage compensated chromosome X. Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-019-13350-8⟩. ⟨hal-02386022⟩
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Frantzeskos Papanikos, Julie a J Clément, Erika Testa, Ramya Ravindranathan, Corinne Grey, et al.. Mouse ANKRD31 Regulates Spatiotemporal Patterning of Meiotic Recombination Initiation and Ensures Recombination between X and Y Sex Chromosomes. Molecular Cell, 2019, 74 (5), pp.1069-1085.e11. ⟨10.1016/j.molcel.2019.03.022⟩. ⟨hal-02359134⟩
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Philippe Pasero, Hélène Tourrière. Overexpression of the Fork Protection Complex: a strategy to tolerate oncogene-induced replication stress in cancer cells. Molecular & Cellular Oncology, 2019, 6 (4), pp.1607455. ⟨10.1080/23723556.2019.1607455⟩. ⟨hal-02351002⟩
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Pierre-Antoine Peyron, Sylvain Lehmann, Constance Delaby, Eric Baccino, Christophe Hirtz. Biochemical markers of time since death in cerebrospinal fluid: A first step towards “Forensomics”. Critical Reviews in Clinical Laboratory Sciences, 2019, 56 (4), pp.274-286. ⟨10.1080/10408363.2019.1619158⟩. ⟨hal-02505396⟩
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Natalia Pinzón, Stéphanie Bertrand, Lucie Subirana, Isabelle Busseau, Hector Escriva, et al.. Functional lability of RNA-dependent RNA polymerases in animals. PLoS Genetics, 2019, 15 (2), pp.e1007915. ⟨10.1371/journal.pgen.1007915⟩. ⟨hal-02081479⟩
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Paulina Prorok, Marie Artufel, Antoine Aze, Philippe Coulombe, Isabelle Peiffer, et al.. Involvement of G-quadruplex regions in mammalian replication origin activity. Nature Communications, 2019, 10 (1), pp.3274. ⟨10.1038/s41467-019-11104-0⟩. ⟨hal-03101805⟩
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Aroa Relaño-Ginès, Sylvain Lehmann, Dominique Deville de Périère, Christophe Hirtz. Dental stem cells as a promising source for cell therapies in neurological diseases. Critical Reviews in Clinical Laboratory Sciences, 2019, 56 (3), pp.170-181. ⟨10.1080/10408363.2019.1571478⟩. ⟨hal-02505362⟩
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Mathieu Ringeard, Virginie Marchand, Etienne Decroly, Yuri Motorin, Yamina Bennasser. FTSJ3 is an RNA 2′-O-methyltransferase recruited by HIV to avoid innate immune sensing. Nature, 2019, 565 (7740), pp.500-504. ⟨10.1038/s41586-018-0841-4⟩. ⟨hal-01981983⟩
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Moïra Rossitto, Margot Ollivier, Stephanie Déjardin, Alain Pruvost, Christine Brun, et al.. In utero exposure to acetaminophen and ibuprofen leads to intergenerational accelerated reproductive aging in female mice. Communications Biology, 2019, 2 (1), pp.310. ⟨10.1038/s42003-019-0552-x⟩. ⟨hal-02402594⟩
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Moïra Rossitto, Candice Marchive, Alain Pruvost, Eli Sellem, Aurelie Ghettas, et al.. Intergenerational effects on mouse sperm quality after in utero exposure to acetaminophen and ibuprofen. FASEB Journal, 2019, 33 (1), pp.339-357. ⟨10.1096/fj.201800488RRR⟩. ⟨hal-01832367⟩
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Kinga Rutowicz, Maciej Lirski, Benoît Mermaz, Gianluca Teano, Jasmin Schubert, et al.. Linker histones are fine-scale chromatin architects modulating developmental decisions in Arabidopsis. Genome Biology, 2019, 20, pp.157. ⟨10.1186/s13059-019-1767-3⟩. ⟨hal-02378703⟩
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Kader Salifou, Rosemary Kiernan, Xavier Contreras. Des complexes protéiques impliqués dans la surveillance de l’ARN nucléaire inhibent la transcription du VIH-1. Médecine/Sciences, 2019, 35 (2), pp.113-115. ⟨10.1051/medsci/2019018⟩. ⟨hal-02037262⟩
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N. Salvetat, S. van Der Laan, B. Vire, F. Chimienti, S. Cleophax, et al.. RNA editing blood biomarkers for predicting mood alterations in HCV patients. Journal of NeuroVirology, 2019, ⟨10.1007/s13365-019-00772-9⟩. ⟨hal-02197601⟩
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Caroline Schluth-Bolard, Flavie Diguet, Nicolas Chatron, Pierre-Antoine Rollat-Farnier, Claire Bardel, et al.. Whole genome paired-end sequencing elucidates functional and phenotypic consequences of balanced chromosomal rearrangement in patients with developmental disorders. Journal of Medical Genetics, 2019, 56 (8), pp.526-535. ⟨10.1136/jmedgenet-2018-105778⟩. ⟨hal-03863519⟩
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Hervé Seitz. On the Number of Functional microRNA Targets. Molecular Biology and Evolution, 2019, 36 (7), pp.1596-1597. ⟨10.1093/molbev/msz054⟩. ⟨hal-02366332⟩
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Youssouf Sereme, Soraya Mezouar, Ghiles Grine, Jean-Louis Mege, Michel Drancourt, et al.. Methanogenic Archaea: Emerging Partners in the Field of Allergic Diseases. Clinical Reviews in Allergy and Immunology, 2019, 57 (3), pp.456-466. ⟨10.1007/s12016-019-08766-5⟩. ⟨hal-02458066⟩
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Françoise Simon, Anne Ramat, Sophie Louvet-Vallée, Jérôme Lacoste, Angélique Burg, et al.. Shaping of Drosophila Neural Cell Lineages Through Coordination of Cell Proliferation and Cell Fate by the BTB-ZF Transcription Factor Tramtrack-69. Genetics, 2019, 212 (3), pp.773-788. ⟨10.1534/genetics.119.302234⟩. ⟨hal-05474674⟩
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Mathilde Soulez, Marc Saba-El-Leil, Benjamin Turgeon, Simon Mathien, Philippe Coulombe, et al.. Reevaluation of the Role of Extracellular Signal-Regulated Kinase 3 in Perinatal Survival and Postnatal Growth Using New Genetically Engineered Mouse Models. Molecular and Cellular Biology, 2019, 39 (6), ⟨10.1128/MCB.00527-18⟩. ⟨hal-03101787⟩
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Tania Sultana, Dominic van Essen, Oliver Siol, Marc Bailly-Bechet, Claude Philippe, et al.. The Landscape of L1 Retrotransposons in the Human Genome Is Shaped by Pre-insertion Sequence Biases and Post-insertion Selection. Molecular Cell, 2019, 74 (3), pp.555-570.e7. ⟨10.1016/j.molcel.2019.02.036⟩. ⟨hal-02401618⟩
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Quentin Szabo, Frederic Bantignies, Giacomo Cavalli. Principles of genome folding into topologically associating domains. Science Advances , 2019, 5 (4), pp.eaaw1668. ⟨10.1126/sciadv.aaw1668⟩. ⟨hal-02990881⟩
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Aubin Thomas, Sylvain Barriere, Lucile Broseus, Julie Brooke, Claudio Lorenzi, et al.. GECKO is a genetic algorithm to classify and explore high throughput sequencing data. Communications Biology, 2019, 2 (1), pp.222. ⟨10.1038/s42003-019-0456-9⟩. ⟨lirmm-02163400⟩
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Miao Tian, Kazufumi Mochizuki, Josef Loidl. Non-coding RNA Transcription in Tetrahymena Meiotic Nuclei Requires Dedicated Mediator Complex-Associated Proteins. Current Biology, 2019, 29 (14), pp.2359-2370.e5. ⟨10.1016/j.cub.2019.05.038⟩. ⟨hal-02387365⟩
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Sofie Traynor, Niels Erik Møllegaard, Mikkel Jørgensen, Nadine Brückmann, Christina Pedersen, et al.. Remodeling and destabilization of chromosome 1 pericentromeric heterochromatin by SSX proteins. Nucleic Acids Research, 2019, 47 (13), pp.6668-6684. ⟨10.1093/nar/gkz396⟩. ⟨hal-05520641⟩
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Siem van Der Laan, Maude Lévêque, Guillaume Marcellin, Lubomir Vezenkov, Yoann Lannay, et al.. Evolutionary Divergence of Enzymatic Mechanisms for Tubulin Detyrosination. Cell Reports, 2019, 29 (12), pp.4159 - 4171. ⟨10.1016/j.celrep.2019.11.074⟩. ⟨hal-03080532⟩
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Siem van Der Laan, Geronimo Dubra, Krzysztof Rogowski. Tubulin glutamylation: a skeleton key for neurodegenerative diseases. Neural Regeneration Research, 2019, ⟨10.4103/1673-5374.259611⟩. ⟨hal-02396110⟩
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Guido van Mierlo, René A.M. Dirks, Laura de Clerck, Arie Brinkman, Michelle Huth, et al.. Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency. Cell Stem Cell, 2019, 24 (1), pp.123-137.e8. ⟨10.1016/j.stem.2018.10.017⟩. ⟨hal-02048483⟩
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Veronika Vikova, Michel Jourdan, Nicolas Robert, Guilhem Requirand, Stephanie Boireau, et al.. Comprehensive characterization of the mutational landscape in multiple myeloma cell lines reveals potential drivers and pathways associated with tumor progression and drug resistance. Theranostics, 2019, 9 (2), pp.540-553. ⟨10.7150/thno.28374⟩. ⟨hal-02883457⟩
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Benjamin Weger, Cédric Gobet, Jake Yeung, Eva Martin, Sonia Jimenez, et al.. The Mouse Microbiome Is Required for Sex-Specific Diurnal Rhythms of Gene Expression and Metabolism. Cell Metabolism, 2019, 29 (2), pp.362-382.e8. ⟨10.1016/j.cmet.2018.09.023⟩. ⟨hal-02048230⟩
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Sineewanlaya Wichit, Rodolphe Hamel, Andreas Zanzoni, Fode Diop, Alexandra Cribier, et al.. SAMHD1 Enhances Chikungunya and Zika Virus Replication in Human Skin Fibroblasts. International Journal of Molecular Sciences, 2019, 20 (7), pp.1695. ⟨10.3390/ijms20071695⟩. ⟨hal-02094916⟩
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Pengyi Yang, Sean Humphrey, Senthilkumar Cinghu, Rajneesh Pathania, Andrew Oldfield, et al.. Multi-omic Profiling Reveals Dynamics of the Phased Progression of Pluripotency. Cell Systems, 2019, 8 (5), pp.427-445.e10. ⟨10.1016/j.cels.2019.03.012⟩. ⟨hal-05474392⟩
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Kevin Yauy, Anouck Schneider, Bee Ling Ng, Jean-Baptiste Gaillard, Satish Sati, et al.. Disruption of chromatin organisation causes MEF2C gene overexpression in intellectual disability: a case report. BMC Medical Genomics, 2019, 12 (1), pp.116. ⟨10.1186/s12920-019-0558-8⟩. ⟨inserm-02305613⟩
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Mehwish Younas, Christina Psomas, Christelle Reynes, Renaud Cezar, Lucy Kundura, et al.. Microbial Translocation Is Linked to a Specific Immune Activation Profile in HIV-1-Infected Adults With Suppressed Viremia. Frontiers in Immunology, 2019, 10, pp.2185. ⟨10.3389/fimmu.2019.02185⟩. ⟨hal-02400229⟩
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Yingjie Zhu, Anna Biernacka, Benjamin Pardo, Norbert Dojer, Romain Forey, et al.. qDSB-Seq is a general method for genome-wide quantification of DNA double-strand breaks using sequencing. Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-019-10332-8⟩. ⟨hal-02358678⟩
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Journal articles

2018

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Mohamad Omar Ashi, Nivine Srour, Jean-Marie Lambert, Anne Marchalot, Ophélie Martin, et al.. Physiological and druggable skipping of immunoglobulin variable exons in plasma cells. Cellular and molecular immunology, 2018, ⟨10.1038/s41423-018-0160-6⟩. ⟨hal-02048156⟩
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Antoine Aze, Domenico Maiorano. Recent advances in understanding DNA replication: cell type–specific adaptation of the DNA replication program. F1000Research, 2018, 7, ⟨10.12688/f1000research.15408.1⟩. ⟨hal-01887450⟩
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Julien Bacal, María Moriel-Carretero, Benjamin Pardo, Antoine Barthe, Sushma Sharma, et al.. Mrc1 and Rad9 cooperate to regulate initiation and elongation of DNA replication in response to DNA damage. EMBO Journal, 2018, ⟨10.15252/embj.201899319⟩. ⟨hal-01887457⟩
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Panagiotis Baliakas, Mattias Mattsson, Anastasia C Hadzidimitriou, Eva Minga, Andreas C Agathangelidis, et al.. No improvement in long-term survival over time for chronic lymphocytic leukemia patients in stereotyped subsets #1 and #2 treated with chemo(immuno)therapy. Haematologica, 2018, 103 (4), pp.e158 - e161. ⟨10.3324/haematol.2017.182634⟩. ⟨hal-01777880⟩
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Jérome Barbier, Xin Chen, Gabriel Sanchez, Muyan Cai, Marion Helsmoortel, et al.. An NF90/NF110-mediated feedback amplification loop regulates dicer expression and controls ovarian carcinoma progression. Cell Research, 2018, 28 (5), pp.556 - 571. ⟨10.1038/s41422-018-0016-8⟩. ⟨hal-01794993⟩
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Bridlin Barckmann, Marianne El-Barouk, Alain Pélisson, Bruno Mugat, Blaise Maxime Li, et al.. The somatic piRNA pathway controls germline transposition over generations. Nucleic Acids Research, 2018, 46 (18), pp.9524 - 9536. ⟨10.1093/nar/gky761⟩. ⟨hal-01904679⟩
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Bridlin Barckmann, Jérémy Dufourt, Martine Simonelig. iCLIP of the PIWI Protein Aubergine in Drosophila Embryos.. Methods in Molecular Biology, 2018, pp.89-110. ⟨10.1007/978-1-4939-7540-2_7⟩. ⟨hal-01726726⟩
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Maëlle Bellec, Ovidiu Radulescu, Mounia Lagha. Remembering the past: Mitotic bookmarking in a developing embryo. Current Opinion in Systems Biology, 2018, 11, pp.41-49. ⟨10.1016/j.coisb.2018.08.003⟩. ⟨hal-02323370⟩
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C. Crozet, M. Verdier, S. Lay, A. Antoni-Zdziobek. Effect of Cooling Rates on γ → α Transformation and Metastable States in Fe–Cu Alloys with Addition of Ni. Metals and Materials International, 2018, 24 (4), pp.681 - 692. ⟨10.1007/s12540-018-0080-0⟩. ⟨hal-01815986⟩
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Eva de Smedt, Ken Maes, Stefaan Verhulst, Hui Lui, Alboukadel Kassambara, et al.. Loss of RASSF4 Expression in Multiple Myeloma Promotes RAS-Driven Malignant Progression. Cancer Research, 2018, 78 (5), pp.1155 - 1168. ⟨10.1158/0008-5472.CAN-17-1544⟩. ⟨hal-01864144⟩
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Seung Yub Han, Alesia Antoine, David Howard, Bryant Chang, Woo Sung Chang, et al.. Coupling of Single Molecule, Long Read Sequencing with IMGT/HighV-QUEST Analysis Expedites Identification of SIV gp140-Specific Antibodies from scFv Phage Display Libraries. Frontiers in Immunology, 2018, 9, pp.329. ⟨10.3389/fimmu.2018.00329⟩. ⟨hal-01738025⟩
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Miroslav P Ivanov, Rene Ladurner, Ina Poser, Rebecca Beveridge, Evelyn Rampler, et al.. The replicative helicase MCM recruits cohesin acetyltransferase ESCO2 to mediate centromeric sister chromatid cohesion. EMBO Journal, 2018, ⟨10.15252/embj.201797150⟩. ⟨hal-02361062⟩
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Cyprien Jahan, Philippe Robin. Le venin de mamba vert, espoir thérapeutique dans la polykystose rénale. Médecine/Sciences, 2018, 34 (11), pp.1006-1008. ⟨10.1051/medsci/2018245⟩. ⟨hal-02970161⟩
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Rajeev Kumar, Cecilia Oliver, Christine Brun, Ariadna Juarez-Martinez, Yara Tarabay, et al.. Mouse REC114 is essential for meiotic DNA double-strand break formation and forms a complex with MEI4. Life Science Alliance, 2018, 1 (6), pp.e201800259. ⟨10.26508/lsa.201800259⟩. ⟨hal-01974944⟩
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Ramhari Kumbhar, Sophie Vidal-Eychenié, Dimitrios-Georgios Kontopoulos, Marion Larroque, Christian Larroque, et al.. Recruitment of ubiquitin-activating enzyme UBA1 to DNA by poly(ADP-ribose) promotes ATR signalling. Life Science Alliance, 2018, 1 (3), pp.e201800096. ⟨10.26508/lsa.201800096⟩. ⟨hal-01980441⟩
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Marc Marti-Renom, Geneviève Almouzni, Wendy Bickmore, Kerstin Bystricky, Giacomo Cavalli, et al.. Challenges and guidelines toward 4D nucleome data and model standards. Nature Genetics, 2018, 50 (10), pp.1352-1358. ⟨10.1038/s41588-018-0236-3⟩. ⟨hal-01980465⟩
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Jolyon Martin, Hannes Ponstingl, Marie-Paule Lefranc, Joy Archer, David Sargan, et al.. Comprehensive annotation and evolutionary insights into the canine (Canis lupus familiaris) antigen receptor loci. Immunogenetics, 2018, 70 (4), pp.223 - 236. ⟨10.1007/s00251-017-1028-0⟩. ⟨hal-01768405⟩
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Brenda Mertens, Valérie Orti, J. Vialaret, Philippe Gibert, A. Relaño-Ginés, et al.. Data from a targeted proteomics approach to discover biomarkers in saliva for the clinical diagnosis of periodontitis. Data in Brief, 2018, 18, pp.294-299. ⟨10.1016/j.dib.2018.03.036⟩. ⟨hal-02498960v2⟩
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Maroua Miliani, Mouna Nouar, Océane Paris, Gerard Lefranc, Franck Mennechet, et al.. Thymoquinone Potently Enhances the Activities of Classically Activated Macrophages Pulsed with Necrotic Jurkat Cell Lysates and the Production of Antitumor Th1-/M1-Related Cytokines. Journal of Interferon and Cytokine Research, 2018, 38 (12), pp.539-551. ⟨10.1089/jir.2018.0010⟩. ⟨hal-02048168⟩
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María Moriel-Carretero, Philippe Pasero, Benjamin Pardo. DDR Inc., one business, two associates. Current Genetics, 2018, ⟨10.1007/s00294-018-0908-7⟩. ⟨hal-02047588⟩
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Jeremie Mortreux, Tiffany Busa, Dominique P. Germain, Gwenaël Nadeau, Jacques Puechberty, et al.. The role of CNVs in the etiology of rare autosomal recessive disorders: the example of TRAPPC9-associated intellectual disability. European Journal of Human Genetics, 2018, 26 (1), pp.143-148. ⟨10.1038/s41431-017-0018-x⟩. ⟨hal-01668647⟩
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Tomoko Noto, Kazufumi Mochizuki. Small RNA-Mediated trans -Nuclear and trans -Element Communications in Tetrahymena DNA Elimination. Current Biology, 2018, 28 (12), pp.1938 - 1949.e5. ⟨10.1016/j.cub.2018.04.071⟩. ⟨hal-01823538⟩
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Yuki Ogiyama, Bernd Schuettengruber, Giorgio Papadopoulos, Jia-Ming Chang, Giacomo Cavalli. Polycomb-Dependent Chromatin Looping Contributes to Gene Silencing during Drosophila Development. Molecular Cell, 2018, 71 (1), pp.73 - 88.e5. ⟨10.1016/j.molcel.2018.05.032⟩. ⟨hal-01864131⟩
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Margot Ollivier, Francoise Paris, Pascal Philibert, Sarah Garnier, Amandine Coffy, et al.. Family History is Underestimated in Children with Isolated Hypospadias: A French Multicenter Report of 88 Families. The Journal of Urology, 2018, 200 (4), pp.890-894. ⟨10.1016/j.juro.2018.04.072⟩. ⟨hal-02290898⟩
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M. Penrad-Mobayed, C. Perrin, D. L'Hôte, V. Contremoulins, J. A. Lepesant, et al.. A role for SOX9 in post-transcriptional processes: insights from the amphibian oocyte. Scientific Reports, 2018, 8 (1), pp.7191. ⟨10.1038/s41598-018-25356-1⟩. ⟨hal-01791215⟩
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Morgane Piton, Christophe Hirtz, Caroline Desmetz, Jacqueline Milhau, Anne-Dominique Lajoix, et al.. Alzheimer’s Disease: Advances in Drug Development. Journal of Alzheimer's Disease, 2018, 65 (1), pp.3 - 13. ⟨10.3233/JAD-180145⟩. ⟨hal-01876065⟩
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Christina Psomas, Edouard Tuaillon, Grégory Marin, Jacques Reynes, Pierre Corbeau. Increased neutrophil surface PD-L1 expression in tobacco smokers. Journal of Acquired Immune Deficiency Syndromes - JAIDS, 2018, 80 (2), pp.1. ⟨10.1097/QAI.0000000000001897⟩. ⟨hal-01988981⟩
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A. Relaño-Ginés, S. Lehmann, E. Brillaud, M. Belondrade, D. Casanova, et al.. Lithium as a disease-modifying agent for prion diseases. Translational Psychiatry, 2018, 8, pp.163. ⟨10.1038/s41398-018-0209-4⟩. ⟨hal-02315548⟩
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Guilhem Requirand, Nicolas Robert, Stéphanie Boireau, Laure Vincent, Anja Seckinger, et al.. BrdU incorporation in multiparameter flow cytometry: A new cell cycle assessment approach in multiple myeloma. Cytometry Part B: Clinical Cytometry, 2018, ⟨10.1002/cyto.b.21730⟩. ⟨hal-02048196⟩
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Magali Richard, Florent Chuffart, Hélène Duplus‐bottin, Fanny Pouyet, Martin Spichty, et al.. Assigning function to natural allelic variation via dynamic modeling of gene network induction. Molecular Systems Biology, 2018, 14 (1), pp.e7803. ⟨10.15252/msb.20177803⟩. ⟨hal-01976613⟩
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Paula Milan Rodriguez, Dirk Stratmann, Élodie Duprat, Nikolaos Papandreou, Ruben Acuna, et al.. Correlating topology and thermodynamics to predict protein structure sensitivity to point mutations. Bio-Algorithms and Med-Systems, 2018, 14 (3), ⟨10.1515/bams-2018-0026⟩. ⟨hal-02133481⟩
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Patricia Rojas-Ríos, Martine Simonelig. piRNAs and PIWI proteins: regulators of gene expression in development and stem cells. Development (Cambridge, England), 2018, 145 (17), ⟨10.1242/dev.161786⟩. ⟨hal-01887523⟩
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Nanda Kumar Sasi, Flavie Coquel, Yea-Lih Lin, Jeffrey Mackeigan, Philippe Pasero, et al.. DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint Signaling. Journal of Mammary Gland Biology and Neoplasia, 2018, 20 (10), pp.985 - 995. ⟨10.1016/j.neo.2018.08.001⟩. ⟨hal-01887535⟩
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Rajini Sreenivasan, Louisa Ludbrook, Brett Fisher, Faustine Declosmenil, Kevin Knower, et al.. Mutant NR5A1/SF-1 in patients with disorders of sex development shows defective activation of the SOX9 TESCO enhancer. Human Mutation, 2018, 39 (12), pp.1861-1874. ⟨10.1002/humu.23603⟩. ⟨pasteur-03521838⟩
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Vanessa Szablewski, Caroline Bret, Alboukadel Kassambara, Julie Devin, Guillaume Cartron, et al.. An epigenetic regulator-related score (EpiScore) predicts survival in patients with diffuse large B cell lymphoma and identifies patients who may benefit from epigenetic therapy. Oncotarget, 2018, 9 (27), pp.19079--19099. ⟨10.18632/oncotarget.24901⟩. ⟨hal-02345949⟩
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Quentin Szabo, Daniel Jost, Jia-Ming Chang, Diego Cattoni, Giorgio Papadopoulos, et al.. TADs are 3D structural units of higher-order chromosome organization in Drosophila. Science Advances , 2018, 4 (2), pp.eaar8082. ⟨10.1126/sciadv.aar8082⟩. ⟨hal-01726709⟩
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Mathieu Tardat, Jérôme Déjardin. Telomere chromatin establishment and its maintenance during mammalian development. Chromosoma Biology of the Nucleus, 2018, 127 (1), pp.3 - 18. ⟨10.1007/s00412-017-0656-3⟩. ⟨hal-01718537⟩
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Juliette van Dijk, Guillaume Bompard, Julien Cau, Shinji Kunishima, Gabriel Rabeharivelo, et al.. Microtubule polyglutamylation and acetylation drive microtubule dynamics critical for platelet formation. BMC Biology, 2018, 16 (1), pp.116. ⟨10.1186/s12915-018-0584-6⟩. ⟨hal-01996730⟩
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Jérôme Vialaret, Sophie Broutin, Célia Pugnier, Sophie Santelé, Aurore Jaffuel, et al.. What sample preparation should be chosen for targeted MS monoclonal antibody quantification in human serum?. Bioanalysis, 2018, 10 (10), pp.723 - 735. ⟨10.4155/bio-2018-0027⟩. ⟨hal-01842189⟩
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Nathan Wong, Helena Cheung, Emma Solly, Laura Vanags, William Ritchie, et al.. Exploring the Roles of CREBRF and TRIM2 in the Regulation of Angiogenesis by High-Density Lipoproteins. International Journal of Molecular Sciences, 2018, 19 (7), ⟨10.3390/ijms19071903⟩. ⟨hal-01887563⟩
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Aliki Xochelli, Vasilis Bikos, Eleftheria Polychronidou, Chrysi Galigalidou, Andreas C Agathangelidis, et al.. Disease-biased and shared characteristics of the immunoglobulin gene repertoires in marginal zone B cell lymphoproliferations. The Journal of pathology and bacteriology, 2018, ⟨10.1002/path.5209⟩. ⟨hal-02048375⟩
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Journal articles

2017

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Chrystelle Aillaud, Christophe Bosc, Leticia Peris, Anouk Bosson, Pierre Heemeryck, et al.. Vasohibins/SVBP are tubulin carboxypeptidases (TCPs) that regulate neuron differentiation. Science, 2017, 358 (6369), pp.1448-1453. ⟨10.1126/science.aao4165⟩. ⟨hal-02345845⟩
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Abdou Akkouche, Bruno Mugat, Bridlin Barckmann, Carolina Varela-Chavez, Blaise Li, et al.. Piwi Is Required during Drosophila Embryogenesis to License Dual-Strand piRNA Clusters for Transposon Repression in Adult Ovaries. Molecular Cell, 2017, 66 (3), pp.411-419. ⟨10.1016/j.molcel.2017.03.017⟩. ⟨hal-01519752⟩
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M Schoenhals, M Jourdan, A Bruyer, A Kassambara, B Klein, et al.. Hypoxia favors the generation of human plasma cells. Cell Cycle, 2017, 1, pp.14. ⟨10.1080/15384101.2017.1317408⟩. ⟨hal-01529310⟩
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Bernd Schuettengruber, Henri-Marc Bourbon, Luciano Di Croce, Giacomo Cavalli. Genome Regulation by Polycomb and Trithorax: 70 Years and Counting. Cell, 2017, 171 (1), pp.34-57. ⟨10.1016/j.cell.2017.08.002⟩. ⟨hal-01596016⟩
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Yb Schwartz, Giacomo Cavalli. Three-Dimensional Genome Organization and Function in Drosophila. Genetics, 2017, 205 (1), pp.5-24. ⟨10.1534/genetics.115.185132⟩. ⟨hal-01427837⟩
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Hervé Seitz. Issues in current microRNA target identification methods. RNA Biology, 2017, pp.1-4. ⟨10.1080/15476286.2017.1320469⟩. ⟨hal-01533414⟩
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Anura Shodhan, Kensuke Kataoka, Kazufumi Mochizuki, Maria Novatchkova, Josef Loidl. A Zip3-like protein plays a role in crossover formation in the SC-less meiosis of the protist Tetrahymena. Molecular Biology of the Cell, 2017, 28 (6), pp.825-833. ⟨10.1091/mbc.E16-09-0678⟩. ⟨hal-02387402⟩
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Jan Suhren, Tomoko Noto, Kensuke Kataoka, Shan Gao, Yifan Liu, et al.. Negative Regulators of an RNAi-Heterochromatin Positive Feedback Loop Safeguard Somatic Genome Integrity in Tetrahymena. Cell Reports, 2017, 18 (10), pp.2494-2507. ⟨10.1016/j.celrep.2017.02.024⟩. ⟨hal-01488426⟩
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Tu-Anh Tran, Anne Filleron, Mathieu Simonin, Pierre Corbeau. Idiopathic systemic capillary leak syndrome in childhood: A Literature Review. Journal of Rare Diseases Research & Treatment, 2017, 2 (1), pp.52-55. ⟨10.29245/2572-9411/2017/1.1070⟩. ⟨hal-03179163⟩
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E Viziteu, B Klein, J. Basbous, Yea-Lih Lin, Christophe Hirtz, et al.. RECQ1 helicase is involved in replication stress survival and drug resistance in multiple myeloma. Leukemia, 2017, 31 (10), pp.2104 - 2113. ⟨10.1038/leu.2017.54⟩. ⟨hal-01630891⟩
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Mehwish Younas, Christina Psomas, Vikram Mehraj, Renaud Cezar, Pierre Portales, et al.. Plasma Level of Soluble ST2 in Chronically Infected HIV-1 Patients with Suppressed Viremia. Open AIDS Journal, 2017, 11, pp.32-35. ⟨10.2174/1874613601711010032⟩. ⟨hal-01530989⟩
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Mehwish Younas, Fabrice Carrat, Corinne Desaint, Odile Launay, Pierre Corbeau. Immune activation, smoking, and vaccine response. AIDS. Official journal of the international AIDS Society, 2017, 31 (1), pp.171 - 173. ⟨10.1097/QAD.0000000000001311⟩. ⟨hal-01900458⟩
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Sihem Zitouni, Francisca Méchali, Catherine Papin, Armelle Choquet, Daniel Barry Roche, et al.. The stability of Fbw7α in M-phase requires its phosphorylation by PKC. PLoS ONE, 2017, 12 (8), pp.e0183500. ⟨10.1371/journal.pone.0183500⟩. ⟨hal-01875263⟩
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Journal articles

2016

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A Aigner, R Buesen, T Gant, N Gooderham, H Greim, et al.. Advancing the use of noncoding RNA in regulatory toxicology: Report of an ECETOC workshop. Regulatory Toxicology and Pharmacology, 2016, 82, pp.127-139. ⟨10.1016/j.yrtph.2016.09.018⟩. ⟨hal-01408914⟩
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Ounissa Ait-Ahmed, Z. Derriche, M. Kameche, Abdessadeq Bahmani, Hanène Souli, et al.. Electro-remediation of lead contaminated kaolinite: An electro-kinetic treatment. Chemical Engineering and Processing: Process Intensification, 2016, 100, pp.37-48. ⟨10.1016/j.cep.2015.12.002⟩. ⟨hal-01340185⟩
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S Alsafadi, A Houy, A Battistella, T Popova, M. Wassef, et al.. Cancer-associated SF3B1 mutations affect alternative splicing by promoting alternative branchpoint usage. Nature Communications, 2016, 7, pp.10615. ⟨10.1038/ncomms10615⟩. ⟨hal-01272099⟩
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Safa Aouinti, Véronique Giudicelli, Patrice Duroux, Dhafer Malouche, Sofia Kossida, et al.. IMGT/StatClonotype for Pairwise Evaluation and Visualization of NGS IG and TR IMGT Clonotype (AA) Diversity or Expression from IMGT/HighV-QUEST. Frontiers in Immunology, 2016, 7, pp.339. ⟨10.3389/fimmu.2016.00339⟩. ⟨hal-01386803⟩
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Safa Aouinti, Dhafer Malouche, Véronique Giudicelli, Sofia Kossida, Marie-Paule Lefranc. Correction: IMGT/HighV-QUEST Statistical Significance of IMGT Clonotype (AA) Diversity per Gene for Standardized Comparisons of Next Generation Sequencing Immunoprofiles of Immunoglobulins and T Cell Receptors. PLoS ONE, 2016, 11 (1), pp.e0146702. ⟨10.1371/journal.pone.0146702⟩. ⟨hal-04321235⟩
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Antoine Aze, Vincenzo Sannino, Paolo Soffientini, Angela Bachi, Vincenzo Costanzo. Centromeric DNA replication reconstitution reveals DNA loops and ATR checkpoint suppression. Nature Cell Biology, 2016, 18 (6), pp.684 - 691. ⟨10.1038/ncb3344⟩. ⟨hal-03403448⟩
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Mouna Barat-Houari, Bruno Dumont, Aurelie J Fabre, Frédéric Tm Them, Yves Alembik, et al.. The expanding spectrum of COL2A1 gene variants IN 136 patients with a skeletal dysplasia phenotype. European Journal of Human Genetics, 2016, 24 (7), pp.992-1000. ⟨10.1038/ejhg.2015.250⟩. ⟨hal-01239808⟩
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D Bastia, P Srivastava P, S Zaman, M Choudhury, Bk Mohanty, et al.. Phosphorylation of CMG helicase and Tof1 is required for programmed fork arrest. Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (26), pp.E3639-3648. ⟨10.1073/pnas.1607552113⟩. ⟨hal-01351255⟩
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Maxime Belondrade, Simon Nicot, Vincent Béringue, Joliette Coste, Sylvain Lehmann, et al.. Rapid and Highly Sensitive Detection of Variant Creutzfeldt - Jakob Disease Abnormal Prion Protein on Steel Surfaces by Protein Misfolding Cyclic Amplification: Application to Prion Decontamination Studies. PLoS ONE, 2016, 11 (1), pp.e0146833. ⟨10.1371/journal.pone.0146833⟩. ⟨hal-01842418⟩
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N Benkafadar, J Menardo, J Bourien, Regis Nouvian, F François, et al.. Reversible p53 inhibition prevents cisplatin ototoxicity without blocking chemotherapeutic efficacy. EMBO Molecular Medicine, 2016, 9 (1), pp.7-26. ⟨10.15252/emmm.201606230⟩. ⟨hal-01427877⟩
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M Bermejo, Mr Lopez-Huertas, J Garcia-Perez, N Climent, B Descours, et al.. Dasatinib Inhibits HIV-1 Replication through the Interference of SAMHD1 Phosphorylation in CD4+ T Cells. Biochemical Pharmacology, 2016, 106, pp.30-45. ⟨10.1016/j.bcp.2016.02.002⟩. ⟨hal-01299286⟩
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S. Besbes, W.-S. Hamadou, Marie-Laure Boulland, Marie-Paule Lefranc, Y. Ben Youssef, et al.. Les marqueurs IKZF1 et IG combinés : nouveaux outils pour le diagnostic et le suivi des LAL-B tunisiennes [Combined IKZF1 and IG markers as new tools for diagnosis and minimal residual disease assessment in Tunisian B-ALL]. Bulletin du Cancer, 2016, 103 (10), pp.822--828. ⟨10.1016/j.bulcan.2016.07.008⟩. ⟨hal-01416157⟩
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B Bonev, Giacomo Cavalli. Organization and function of the 3D genome. Nature Reviews Genetics, 2016, 17 (11), pp.661-678. ⟨10.1038/nrg.2016.112⟩. ⟨hal-01386805⟩
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Pierre Boudinot, Stanislas Mondot, Luc Jouneau, Luc Teyton, Marie-Paule Lefranc, et al.. Restricting nonclassical MHC genes coevolve with TRAV genes used by innate-like T cells in mammals.. Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (21), pp.2983-2992. ⟨10.1073/pnas.1600674113⟩. ⟨hal-02635805⟩
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C Brégnard, J Guerra, J Déjardin, F Passalacqua, M Benkirane, et al.. Upregulated LINE-1 activity in the Fanconi Anemia cancer susceptibility syndrome leads to spontaneous pro-inflammatory cytokine production. EBioMedicine, 2016, 8, pp.184-194. ⟨10.1016/j.ebiom.2016.05.005⟩. ⟨hal-01351260⟩
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C Bret, E Viziteu, A Kassambara, J Moreaux. Identifying high-risk adult AML patients: epigenetic and genetic risk factors and their implications for therapy. Expert Review of Hematology, 2016, 9 (4), pp.351-360. ⟨10.1586/17474086.2016.1141673⟩. ⟨hal-01299313⟩
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A. Chartier, Claire Onofri, L. van Brutzel, C. Sabathier, O. Dorosh, et al.. Early stages of irradiation induced dislocations in urania. Applied Physics Letters, 2016, 109 (18), pp.181902. ⟨10.1063/1.4967191⟩. ⟨cea-02388614⟩
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Thierry Cheutin, Marie-Françoise O'Donohue, Adrien Beorchia, Christophe Klein, Hervé H. Kaplan, et al.. Three-dimensional Organization of pKi-67: A Comparative Fluorescence and Electron Tomography Study Using Fluoronanogold. Journal of Histochemistry and Cytochemistry, 2016, 51 (11), pp.1411-1423. ⟨10.1177/002215540305101102⟩. ⟨hal-02328305⟩
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T. Cheutin, G. Cavalli. Following the Motion of Polycomb Bodies in Living Drosophila Embryos. Methods in Molecular Biology, 2016, 1480, pp.283-288. ⟨10.1007/978-1-4939-6380-5_24⟩. ⟨hal-01377539⟩
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M Coiras, M Bermejo, B Descours, E Mateos, J Garcia-Perez, et al.. IL-7 Induces SAMHD1 Phosphorylation in CD4+ T Lymphocytes, Improving Early Steps of HIV-1 Life Cycle. Cell Reports, 2016, 14 (9), pp.2100-2107. ⟨10.1016/j.celrep.2016.02.022⟩. ⟨hal-01287804⟩
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Sg Deeks, Sr Lewin, Al Ross, J Ananworanich, M Benkirane, et al.. International AIDS Society global scientific strategy: towards an HIV cure 2016. Nature Medicine, 2016, 22 (8), pp.839-850. ⟨10.1038/nm.4108⟩. ⟨hal-01355203⟩
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M Entrevan, B. Schuettengruber, G. Cavalli. Regulation of Genome Architecture and Function by Polycomb Proteins. Trends in Cell Biology, 2016, 26 (7), pp.239-251. ⟨10.1016/j.tcb.2016.04.009⟩. ⟨hal-01351264⟩
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Charlotte Faurie, Clement Mettling, Mohamed Ali Bchir, Danang Hadmoko, Carine Heitz, et al.. Evidence of genotypic adaptation to the exposure to volcanic risk at the dopamine receptor DRD4 locus. Scientific Reports, 2016, 6 (37745), 7 p. ⟨10.1038/srep37745⟩. ⟨hal-02062364⟩
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Sara Fneich, André Théron, Celine Cosseau, Anne Rognon, Benoit Aliaga, et al.. Epigenetic origin of adaptive phenotypic variants in the human blood-fluke Schistosoma mansoni. Epigenetics and Chromatin, 2016, 9, pp.227. ⟨10.1186/s13072-016-0076-2⟩. ⟨hal-01364014⟩
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Laura Gaspari, Françoise Paris, Nicolas Leboucq, Alain Bonafe, Charles Sultan. Reversible growth failure and complete GH deficiency in a 4-year-old girl with very early Hashimoto’s thyroiditis and subsequent hyperplasia of pituitary thyrotroph cells. European Journal of Pediatrics, 2016, 175 (8), pp.1119 - 1122. ⟨10.1007/s00431-016-2698-6⟩. ⟨hal-01881363⟩
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Corinne Grey, Julien Espeut, Rachel Ametsitsi, Rajeev Kumar, Malgorzata Luksza, et al.. SKAP, an outer kinetochore protein, is required for mouse germ cell development. Reproduction [Cambridge], 2016, 151 (3), pp.239-251. ⟨10.1530/REP-15-0451⟩. ⟨hal-01269604⟩
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Laurie Herviou, Giacomo Cavalli, Guillaume Cartron, Bernard Klein, Jérôme Moreaux. EZH2 in normal hematopoiesis and hematological malignancies. Oncotarget, 2016, 7 (3), pp.2284-2296. ⟨10.18632/oncotarget.6198⟩. ⟨hal-01275235⟩
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S Hoffmann, S Clauss, Ina M. Berger, B Weib, A Montalbano, et al.. Coding and non-coding variants in the SHOX2 gene in patients with early-onset atrial fibrillation. Basic Research in Cardiology, 2016, 111 (3), pp.36. ⟨10.1007/s00395-016-0557-2⟩. ⟨hal-01313597⟩
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James R.A. Hutchins, Sabine Traver, Philippe Coulombe, Isabelle Peiffer, Magali Kitzmann, et al.. Proteomic data on the nuclear interactome of human MCM9. Data in Brief, 2016, 6, pp.410-415. ⟨10.1016/j.dib.2015.11.055⟩. ⟨hal-03101781⟩
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Michel Jourdan, Maïlys Cren, Peter A Schäfer, Nicolas Robert, Christophe Duperray, et al.. Differential effects of lenalidomide during plasma cell differentiation. Oncotarget, 2016, 7 (19), pp.28096-28111. ⟨10.18632/oncotarget.8581⟩. ⟨hal-01355076⟩
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A.-J. Jung, S. Soskin, F. Paris, D. Lipsker. Syndrome de McCune-Albright révélé par des taches café-au-lait blaschko-linéaires du dos. Annales de Dermatologie et de Vénéréologie, 2016, 143 (1), pp.21 - 26. ⟨10.1016/j.annder.2015.10.585⟩. ⟨hal-01885989⟩
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Dg Kontopoulos, D Vlachakis, G Tsiliki, S Kossida. Structuprint: a scalable and extensible tool for two-dimensional representation of protein surfaces. BMC Structural Biology, 2016, 16 (1), pp.4. ⟨10.1186/s12900-016-0055-7⟩. ⟨hal-01284247⟩
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B Leblanc, I Comet, Frederic Bantignies, Giacomo Cavalli. Chromosome Conformation Capture on Chip (4C): Data Processing. Methods in Molecular Biology, 2016, 1480, pp.243-261. ⟨10.1007/978-1-4939-6380-5_21⟩. ⟨hal-01377541⟩
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Pascale Lesage, Mireille Bétermier, Antoine Bridier-Nahmias, Michael Chandler, Séverine Chambeyron, et al.. International Congress on Transposable elements (ICTE 2016) in Saint Malo: mobile elements under the sun of Brittany. Mobile DNA, 2016, 7 (1), pp.19. ⟨10.1186/s13100-016-0075-7⟩. ⟨inserm-01384467⟩
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Pascale Lesage, Mireille Bétermier, Antoine Bridier-Nahmias, Michael Chandler, Séverine Chambeyron, et al.. International Congress on Transposable elements (ICTE 2016) in Saint Malo: mobile elements under the sun of Brittany. Mobile DNA, 2016, 7 (1), pp.19. ⟨10.1186/s13100-016-0075-7⟩. ⟨hal-04943687⟩
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V Loubiere, A Delest, Aubin Thomas, B Bonev, B Schuettengruber, et al.. Coordinate redeployment of PRC1 proteins suppresses tumor formation during Drosophila development. Nature Genetics, 2016, 48 (11), pp.1436-1442. ⟨10.1038/ng.3671⟩. ⟨hal-01393390⟩
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S Lub, A Maes, K Maes, K de Veirman, E de Bruyne, et al.. Inhibiting the anaphase promoting complex/cyclosome induces a metaphase arrest and cell death in multiple myeloma cells. Oncotarget, 2016, 7 (4), pp.4061-4076. ⟨10.18632/oncotarget.6768⟩. ⟨hal-01299387⟩
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Rf Luco. Retrotransposons jump into alternative-splicing regulation via a long noncoding RNA. Nature Structural and Molecular Biology, 2016, 23 (11), pp.952-954. ⟨10.1038/nsmb.3318⟩. ⟨hal-01393292⟩
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Laurent Maïmoun, F. Paris, O. Coste, Charles Sultan. Intensive training and menstrual disorders in young female: Impact on bone mass. Gynécologie Obstétrique & Fertilité, 2016, 44 (11), pp.659 - 663. ⟨10.1016/j.gyobfe.2016.09.001⟩. ⟨hal-01818455⟩
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Laurent Maïmoun, S. Guillaume, P. Lefebvre, P. Philibert, H. Bertet, et al.. Evidence of a link between resting energy expenditure and bone remodelling, glucose homeostasis and adipokine variations in adolescent girls with anorexia nervosa. Osteoporosis International, 2016, 27 (1), pp.135 - 146. ⟨10.1007/s00198-015-3223-x⟩. ⟨hal-01800536⟩
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Laurent Maïmoun, Sébastien Guillaume, P. Lefebvre, P. Philibert, H. Bertet, et al.. Is Serum Serotonin Involved in the Bone Loss of Young Females with Anorexia Nervosa?. Hormone and Metabolic Research, 2016, 48 (03), pp.174 - 177. ⟨10.1055/s-0035-1559632⟩. ⟨hal-01800538⟩
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Müge Ogrunc, Ricardo Ivan Martinez-Zamudio, Paul Ben Sadoun, Gregory Dore, Helene Schwerer, et al.. USP1 Regulates Cellular Senescence by Controlling Genomic Integrity. Cell Reports, 2016, 15 (7), pp.1401-1411. ⟨10.1016/j.celrep.2016.04.033⟩. ⟨hal-01319844⟩
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F. Paris, L. Gaspari, F. Mbou, P. Philibert, F. Audran, et al.. Endocrine and molecular investigations in a cohort of 25 adolescent males with prominent/persistent pubertal gynecomastia. Andrology, 2016, 4 (2), pp.263 - 269. ⟨10.1111/andr.12145⟩. ⟨hal-01881013⟩
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J Poli, C. B. Gerhold, A Tosi, N Hustedt, A Seeber, et al.. Mec1, INO80, and the PAF1 complex cooperate to limit transcription replication conflicts through RNAPII removal during replication stress. Genes and Development, 2016, 30 (3), pp.337-354. ⟨10.1101/gad.273813.115⟩. ⟨hal-01269617⟩
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C Psomas, M Younas, Christelle Reynes, R Cezar, P Portalès, et al.. One of the immune activation profiles observed in HIV-1-infected adults with suppressed viremia is linked to metabolic syndrome: The ACTIVIH study. EBioMedicine, 2016, 8, pp.265-276. ⟨10.1016/j.ebiom.2016.05.008⟩. ⟨hal-01351341⟩
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Cyril Ribeyre, Ralph Zellweger, Maëva Chauvin, Nicole Bec, Christian Larroque, et al.. Nascent DNA Proteomics Reveals a Chromatin Remodeler Required for Topoisomerase I Loading at Replication Forks. Cell Reports, 2016, 15 (2), pp.300-309. ⟨10.1016/j.celrep.2016.03.027⟩. ⟨hal-02556384⟩
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T Robert, N Vrielynck, C Mézard, Bernard de Massy, M Grelon. A new light on the meiotic DSB catalytic complex. Seminars in Cell and Developmental Biology, 2016, 54, pp.165-176. ⟨10.1016/j.semcdb.2016.02.025⟩. ⟨hal-01320053⟩
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T Robert, A Nore, C Brun, C Maffre, B Crimi, et al.. The TopoVIB-Like protein family is required for meiotic DNA double-strand break formation. Science, 2016, 351 (6276), pp.943-949. ⟨10.1126/science.aad5309⟩. ⟨hal-01280382⟩
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S Sati, Giacomo Cavalli. Chromosome conformation capture technologies and their impact in understanding genome function. Chromosoma Biology of the Nucleus, 2016, 126 (1), pp.33-44. ⟨10.1007/s00412-016-0593-6⟩. ⟨hal-01506418⟩
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G. Sattonnay, S. Cammelli, D. Menut, N. Sellami, C. Grygiel, et al.. Key role of the short-range order on the response of the titanate pyrochlore Y 2 T i 2 O 7 to irradiation. Physical Review B, 2016, 94 (22), ⟨10.1103/PhysRevB.94.224109⟩. ⟨hal-01626191⟩
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A Seeber, Am Hegnauer, N Hustedt, I Deshpande, J Poli, et al.. RPA Mediates Recruitment of MRX to Forks and Double-Strand Breaks to Hold Sister Chromatids Together. Molecular Cell, 2016, 64 (5), pp.951-966. ⟨10.1016/j.molcel.2016.10.032⟩. ⟨hal-01408926⟩
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Michal Sobecki, Karim Mrouj, Alain Camasses, Nikolaos Parisis, Emilien Nicolas, et al.. The cell proliferation antigen Ki-67 organises heterochromatin. eLife, 2016, 5, pp.e13722. ⟨10.7554/eLife.13722⟩. ⟨hal-02120902⟩
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M Stanzione, M Baumann, F Papanikos, I Dereli, J Lange, et al.. Meiotic DNA break formation requires the unsynapsed chromosome axis-binding protein IHO1 (CCDC36) in mice. Nature Cell Biology, 2016, 18 (11), pp.1208-1220. ⟨10.1038/ncb3417⟩. ⟨hal-01408933⟩
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Erin b. Styles, Karen j. Founk, Lee a. Zamparo, Tina l. Sing, Dogus Altintas, et al.. Exploring Quantitative Yeast Phenomics with Single-Cell Analysis of DNA Damage Foci. Cell Systems, 2016, 3 (3), pp.264-277.e10. ⟨10.1016/j.cels.2016.08.008⟩. ⟨hal-02553038⟩
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G Uzcanga, E Lara, F Gutiérrez, D Beaty, T Beske, et al.. Nuclear DNA replication and repair in parasites of the genus Leishmania: Exploiting differences to develop innovative therapeutic approaches. Critical Reviews in Microbiology, 2016, 14, pp.1-22. ⟨10.1080/1040841X.2016.1188758⟩. ⟨hal-01428624⟩
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J. M. Victor, G. Debret, A. Lesne, L. Pascoe, P. Carrivain, et al.. Network Modeling of Crohn's Disease Incidence. PLoS ONE, 2016, 11 (6), pp.e0156138. ⟨10.1371/journal.pone.0156138⟩. ⟨hal-02187347⟩
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Sabrina Villalpando, Chantal Cazevieille, Anne Fernandez, Ned J. Lamb, El-Habib Hani. Type II PKAs are anchored to mature insulin secretory granules in INS-1 β-cells and required for cAMP-dependent potentiation of exocytosis. Biochimie, 2016, 125, pp.32-41. ⟨10.1016/j.biochi.2016.02.008⟩. ⟨hal-01356672⟩
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Marie Vincent, David Geneviève, Agnès Ostertag, Sandrine Marlin, Didier Lacombe, et al.. Treacher Collins syndrome: a clinical and molecular study based on a large series of patients.. Genetics in Medicine, 2016, 18 (1), pp.49-56. ⟨10.1038/gim.2015.29⟩. ⟨hal-01134364⟩
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Elena Viziteu, Alboukadel Kassambara, Philippe Pasero, Bernard Klein, Jerome Moreaux. RECQ helicases are deregulated in hematological malignancies in association with a prognostic value. Biomarker Research, 2016, 4, pp.3. ⟨10.1186/s40364-016-0057-4⟩. ⟨inserm-01322505⟩
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Elena Viziteu, Camille Grandmougin, Harmut Goldschmidt, Anja Seckinger, Dirk Hose, et al.. Chetomin, targeting HIF-1α/p300 complex, exhibits antitumour activity in multiple myeloma. British Journal of Cancer, 2016, 114 (5), pp.519-523. ⟨10.1038/bjc.2016.20⟩. ⟨hal-01284314⟩
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D. Weissmann, S. van Der Laan, D Underwood, N. Salvetat, L. Cavarec, et al.. Region-specific alterations of A-to-I RNA editing of serotonin 2c receptor in the cortex of suicides with major depression. Translational Psychiatry, 2016, 6 (8), pp.e878-e878. ⟨10.1038/tp.2016.121⟩. ⟨hal-02236898⟩
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Yw Wu, C Mettling, Sr Wu, Cy Yu, Gc Perng, et al.. Autophagy-associated dengue vesicles promote viral transmission avoiding antibody neutralization. Scientific Reports, 2016, 6, pp.32243. ⟨10.1038/srep32243⟩. ⟨hal-01377127⟩
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M. Younas, C Psomas, J Reynes, P Corbeau. Immune activation in the course of HIV-1 infection: Causes, phenotypes and persistence under therapy. HIV Medicine, 2016, 17 (2), pp.85-105. ⟨10.1111/hiv.12310⟩. ⟨hal-01262743⟩
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Journal articles

2015

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Safa Aouinti, Dhafer Malouche, Véronique Giudicelli, Sofia Kossida, Marie-Paule Lefranc. IMGT/HighV-QUEST Statistical Significance of IMGT Clonotype (AA) Diversity per Gene for Standardized Comparisons of Next Generation Sequencing Immunoprofiles of Immunoglobulins and T Cell Receptors. PLoS ONE, 2015, 10 (11), pp.e142353. ⟨10.1371/journal.pone.0142353⟩. ⟨hal-01228428⟩
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Zaïra Esperanza Arellano Anaya, Alvina Huor, Pascal Leblanc, Sylvain Lehmann, Monique Provansal, et al.. Prion strains are differentially released through the exosomal pathway. Cellular and Molecular Life Sciences, 2015, 72 (6), pp.1185 - 1196. ⟨10.1007/s00018-014-1735-8⟩. ⟨hal-02635933⟩
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M. Arnaud, M. Barat-Houari, V. Gatinois, E. Sanchez, S. Lyonnet, et al.. Le syndrome Kabuki : mise au point et revue de la littérature. Archives de Pédiatrie, 2015, 22 (6), pp.653 - 660. ⟨10.1016/j.arcped.2015.03.020⟩. ⟨hal-01847059⟩
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Karim Azzag, Yoann Chélin, Francois Rousset, Emilie Le Goff, Camille Martinand-Mari, et al.. The Non-Proliferative Nature of Ascidian Folliculogenesis as a Model of Highly Ordered Cellular Topology Distinct from Proliferative Epithelia. PLoS ONE, 2015, 10 (5), ⟨10.1371/journal.pone.0126341⟩. ⟨hal-01772603⟩
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Panagiotis Baliakas, Andreas Agathangelidis, Anastasia C Hadzidimitriou, Lesley-Ann Sutton, Eva Minga, et al.. Not all IGHV3-21 chronic lymphocytic leukemias are equal: prognostic considerations. Blood, 2015, 125 (5), pp.856-859. ⟨10.1182/blood-2014-09-600874⟩. ⟨hal-01265855⟩
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B. Barckmann, S. Pierson, J Dufourt, Papin C, C. Armenise, et al.. Aubergine iCLIP Reveals piRNA-Dependent Decay of mRNAs Involved in Germ Cell Development in the Early Embryo. Cell Reports, 2015, 12 (7), pp.1205-1216. ⟨10.1016/j.celrep.2015.07.030⟩. ⟨hal-01186665⟩
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B. Boizet-Bonhoure. Development and pathology of the gonad. Seminars in Cell and Developmental Biology, 2015, 45, pp.57-58. ⟨10.1016/j.semcdb.2015.11.009⟩. ⟨hal-01262760⟩
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V Borde, de Massy B. Meiosis: early DNA double-strand breaks pave the way for inter-homolog repair. Developmental Cell, 2015, 32 (6), pp.663-664. ⟨10.1016/j.devcel.2015.03.011⟩. ⟨hal-01143979⟩
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A Boulanger, Jean-Maurice Dura. Nuclear receptors and Drosophila neuronal remodelling. BBA - Biochimica et Biophysica Acta, 2015, 1849 (2), pp.187-195. ⟨10.1016/j.bbagrm.2014.05.024⟩. ⟨hal-01110637⟩
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J Bousquet, Jm Anto, K Berkouk, P Gergen, J Pinto Antunes, et al.. Developmental determinants in non-communicable chronic diseases and ageing. Thorax, 2015, 70 (6), pp.595-597. ⟨10.1136/thoraxjnl-2014-206304⟩. ⟨hal-01263281⟩
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Jean Bousquet, Rodolphe Bourret, Thierry Camuzat, Philippe Augé, Philippe Domy, et al.. Le site de référence du Partenariat européen d’innovation pour un vieillissement actif et en bonne santé MACVIA-LR (contre les maladies chroniques pour un vieillissement en bonne santé en Languedoc-Roussillon). La Presse Médicale, 2015, 44 (1), pp.S6-S22. ⟨10.1016/j.lpm.2015.07.013⟩. ⟨hal-01756022⟩
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Caroline Bret, Bernard Klein, Guillaume Cartron, Jean-François Schved, Angelos Constantinou, et al.. DNA repair in diffuse large B-cell lymphoma: a molecular portrait. British Journal of Haematology, 2015, 169 (2), pp.296-299. ⟨10.1111/bjh.13206⟩. ⟨hal-01143993⟩
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Giacomo Cavalli. PRC1 proteins orchestrate three-dimensional genome architecture. Nature Genetics, 2015, 47 (10), pp.1105-1106. ⟨10.1038/ng.3411⟩. ⟨hal-01228431⟩
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Christelle Cayrou, Benoit Ballester, Isabelle Peiffer, Romain Fenouil, Philippe Coulombe, et al.. The chromatin environment shapes DNA replication origin organization and defines origin classes. Genome Research, 2015, 25 (12), pp.1873-1885. ⟨10.1101/gr.192799.115⟩. ⟨hal-03101863⟩
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Jia-Ming Chang, Paolo Di tommaso, Vincent Lefort, Olivier Gascuel, Cedric Notredame. TCS: a web server for multiple sequence alignment evaluation and phylogenetic reconstruction. Nucleic Acids Research, 2015, 43 (W1), pp.W3-W6. ⟨10.1093/nar/gkv310⟩. ⟨lirmm-01283940⟩
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Aymeric Chartier, Pierre Klein, Stéphanie Pierson, Nicolas Barbezier, Teresa Gidaro, et al.. Mitochondrial Dysfunction Reveals the Role of mRNA Poly(A) Tail Regulation in Oculopharyngeal Muscular Dystrophy Pathogenesis. PLoS Genetics, 2015, 11 (3), pp.e1005092. ⟨10.1371/journal.pgen.1005092⟩. ⟨hal-01231399⟩
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F. Ciabrelli, Giacomo Cavalli. Chromatin-Driven Behavior of Topologically Associating Domains. Journal of Molecular Biology, 2015, 427 (3), pp.608-625. ⟨10.1016/j.jmb.2014.09.013⟩. ⟨hal-01132921⟩
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Frédéric Cuisinier, J. Bousquet, D. Kuh, M. Bewick, T. Strandberg, et al.. Operative definition of active and healthy ageing (AHA): Meeting report. Montpellier October 20–21, 2014. European Geriatric Medicine, 2015, 6 (2), pp.196 - 200. ⟨10.1016/j.eurger.2014.12.006⟩. ⟨hal-01743411⟩
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Solène Debaisieux, Simon Lachambre, Antoine Gross, Clément Mettling, Sébastien Besteiro, et al.. HIV-1 Tat inhibits phagocytosis by preventing the recruitment of Cdc42 to the phagocytic cup. Nature Communications, 2015, 6 (1), pp.6211. ⟨10.1038/ncomms7211⟩. ⟨hal-02146268⟩
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J. Dejardin. Switching between Epigenetic States at Pericentromeric Heterochromatin. Trends in Genetics, 2015, 31 (11), pp.661-672. ⟨10.1016/j.tig.2015.09.003⟩. ⟨hal-01228442⟩
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Aj Doucet, G Droc, O Siol, J Audoux, N Gilbert. U6 snRNA Pseudogenes: Markers of Retrotransposition Dynamics in Mammals. Molecular Biology and Evolution, 2015, 32 (7), pp.1815-1832. ⟨10.1093/molbev/msv062⟩. ⟨hal-01168006⟩
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Vuthy Ea, Tom Sexton, Thierry Gostan, Laurie Herviou, Marie-Odile Baudement, et al.. Distinct polymer physics principles govern chromatin dynamics in mouse and Drosophila topological domains. BMC Genomics, 2015, 16, pp.607. ⟨10.1186/s12864-015-1786-8⟩. ⟨hal-01212952⟩
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L.T. Ellis, A.K. Asthana, Arunima Srivastava, Vadim A. Bakalin, Halina Bednarek-Ochyra, et al.. New national and regional bryophyte records, 43. Journal of Bryology, 2015, 37 (2), pp.128-146. ⟨10.1179/1743282015Y.0000000003⟩. ⟨hal-01168260⟩
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L. T. Ellis, M. Aleffi, Vadim A. Bakalin, Halina Bednarek-Ochyra, A. Bergamini, et al.. New national and regional bryophyte records, 42. Journal of Bryology, 2015, 37 (1), pp.68-85. ⟨10.1179/1743282014Y.0000000132⟩. ⟨hal-01142633⟩
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Karin R Engelhardt, Michael E Gertz, Sevgi Keles, Alejandro A Schäffer, Elena C Sigmund, et al.. The extended clinical phenotype of 64 patients with dedicator of cytokinesis 8 deficiency.. Journal of Allergy and Clinical Immunology: In Practice, 2015, 136 (2), pp.402-12. ⟨10.1016/j.jaci.2014.12.1945⟩. ⟨pasteur-01375035⟩
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M Fragkos, O. Ganier, P. Coulombe, M. Mechali. DNA replication origin activation in space and time. Nature Reviews Molecular Cell Biology, 2015, 16 (6), pp.360-374. ⟨10.1038/nrm4002⟩. ⟨hal-01159618⟩
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Véronique Giudicelli, Patrice Duroux, Arthur Lavoie, Safa Aouinti, Marie-Paule Lefranc, et al.. From IMGT-ONTOLOGY to IMGT/HighVQUEST for NGS Immunoglobulin (IG) and T cell Receptor (TR) Repertoires in Autoimmune and Infectious Diseases. Autoimmune and Infectious Diseases: Open Access ( ISSN 2470-1025 ), 2015, 1 (1), ⟨10.16966/2470-1025.103⟩. ⟨hal-04320972⟩
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I Gonzalez, R Munita, E Agirre, Ta Dittmer, K Gysling, et al.. A lncRNA regulates alternative splicing via establishment of a splicing-specific chromatin signature. Nature Structural and Molecular Biology, 2015, 22 (5), pp.370-376. ⟨10.1038/nsmb.3005⟩. ⟨hal-01153122⟩
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Wafa Hassen, Alboukadel Kassambara, Thierry Rème, S Sahota, A Seckinger, et al.. Drug metabolism and clearance system in tumor cells of patients with multiple myeloma. Oncotarget, 2015, 6 (8), pp.6431-6447. ⟨10.18632/oncotarget.3237⟩. ⟨hal-01153138⟩
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S Ide, J Dejardin. End-targeting proteomics of isolated chromatin segments of a mammalian ribosomal RNA gene promoter. Nature Communications, 2015, 6, pp.6674. ⟨10.1038/ncomms7674⟩. ⟨hal-01143999⟩
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Nicolas Kalfa, Françoise Paris, Pascal Philibert, Mattea Orsini, Sylvie Broussous, et al.. Is Hypospadias Associated with Prenatal Exposure to Endocrine Disruptors? A French Collaborative Controlled Study of a Cohort of 300 Consecutive Children Without Genetic Defect. European Urology, 2015, 68 (6), pp.1023 - 1030. ⟨10.1016/j.eururo.2015.05.008⟩. ⟨hal-01915144⟩
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Chames Kermi, Susana Prieto, Siem Van der laan, Nikolay Tsanov, Bénédicte Recolin, et al.. RAD18 Is a Maternal Limiting Factor Silencing the UV-Dependent DNA Damage Checkpoint in Xenopus Embryos. Developmental Cell, 2015, 34 (3), pp.364-372. ⟨10.1016/j.devcel.2015.06.002⟩. ⟨hal-02121294⟩
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Rajeev Kumar, Norbert B Ghyselinck, Kei‐ichiro Ishiguro, Yoshinori Watanabe, Anna Kouznetsova, et al.. MEI4 - a central player in the regulation of meiotic DNA double-strand break formation in the mouse. Journal of Cell Science, 2015, 128 (9), pp.1800-1811. ⟨10.1242/jcs.165464⟩. ⟨hal-01153588⟩
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Philip Yuk Kwong, Alexandra Stuetzer, Wolfgang Fischle, Anne-Marie Martinez, Giacomo Cavalli. Histone H3 Serine 28 Is Essential for Efficient Polycomb-Mediated Gene Repression in Drosophila. Cell Reports, 2015, 11 (9), pp.1437-1445. ⟨10.1016/j.celrep.2015.04.055⟩. ⟨hal-01363389⟩
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Nadine Laguette, M. Benkirane. Shaping of the host cell by viral accessory proteins. Frontiers in Microbiology, 2015, 6, pp.142. ⟨10.3389/fmicb.2015.00142⟩. ⟨hal-01131839⟩
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Marion Lapierre, Audrey Castet-Nicolas, Delphine Gitenay, Stéphan Jalaguier, Catherine Teyssier, et al.. Expression and role of RIP140/NRIP1 in chronic lymphocytic leukemia. Journal of Hematology and Oncology, 2015, 8 (1), pp.20. ⟨10.1186/s13045-015-0116-6⟩. ⟨hal-01153157⟩
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Emilie Le Goff, Camille Martinand-Mari, Marianne Martin, Jerome Feuillard, Yvan Boublik, et al.. Enhancer of zeste acts as a major developmental regulator of Ciona intestinalis embryogenesis. Biology Open, 2015, 4 (9), pp.1109 - 1121. ⟨10.1242/bio.010835⟩. ⟨hal-01920284⟩
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Marie-Paule Lefranc, Véronique Giudicelli, Patrice Duroux, Joumana Jabado-Michaloud, Géraldine Folch, et al.. IMGT®, the international ImMunoGeneTics information system® 25 years on. Nucleic Acids Research, 2015, 43, pp.D413-422. ⟨10.1093/nar/gku1056⟩. ⟨hal-01101330⟩
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Liuzhe Li, Xiao-Hong Wang, Constance Williams, Barbara Volsky, Olivia Steczko, et al.. A broad range of mutations in HIV-1 neutralizing human monoclonal antibodies specific for V2, V3, and the CD4 binding site. Molecular Immunology, 2015, 66 (2), pp.364-374. ⟨10.1016/j.molimm.2015.04.011⟩. ⟨hal-01153595⟩
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R. Locatelli, Philippe Bousquet, F. Hourdin, M. Saunois, A. Cozic, et al.. Atmospheric transport and chemistry of trace gases in LMDz5B: evaluation and implications for inverse modelling. Geoscientific Model Development, 2015, 8 (2), pp.129 - 150. ⟨10.5194/gmd-8-129-2015⟩. ⟨hal-01806661⟩
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K Maes, E de Smedt, A Kassambara, D Hose, A Seckinger, et al.. In vivo treatment with epigenetic modulating agents induces transcriptional alterations associated with prognosis and immunomodulation in multiple myeloma. Oncotarget, 2015, 6 (5), pp.3319-3334. ⟨10.18632/oncotarget.3207⟩. ⟨hal-01153601⟩
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Cecilia Marelli, Laure-Anne Gutierrez, Nicolas Menjot de Champfleur, Céline Charroud, Delphine de Verbizier, et al.. Late-onset behavioral variant of frontotemporal lobar degeneration versus Alzheimer's disease: Interest of cerebrospinal fluid biomarker ratios. Alzheimer's & Dementia : the Journal of the Alzheimer's Association, 2015, 1 (3), pp.371 - 379. ⟨10.1016/j.dadm.2015.06.004⟩. ⟨hal-01842450⟩
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D Menolfi, A. Delamarre, A. Lengronne, P Pasero, D Branzei. Essential Roles of the Smc5/6 Complex in Replication through Natural Pausing Sites and Endogenous DNA Damage Tolerance. Molecular Cell, 2015, 60 (6), pp.835-846. ⟨10.1016/j.molcel.2015.10.023⟩. ⟨hal-01262757⟩
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B. Mugat, A. Akkouche, V Serrano, C. Armenise, B Li, et al.. MicroRNA-Dependent Transcriptional Silencing of Transposable Elements in Drosophila Follicle Cells. PLoS Genetics, 2015, 11 (5), pp.e1005194. ⟨10.1371/journal.pgen.1005194⟩. ⟨hal-01159636⟩
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Nc Nicolaides, Eb Geer, D Vlachakis, Ml Roberts, Am Psarra, et al.. A novel mutation of the hGR gene causing Chrousos syndrome. European Journal of Clinical Investigation, 2015, 45 (8), pp.782-791. ⟨10.1111/eci.12470⟩. ⟨hal-01186691⟩
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R. Pigeault, J. Vezilier, A. Nicot, Sylvain Gandon, A. Rivero. Transgenerational effect of infection in Plasmodium-infected mosquitoes. Biology Letters, 2015, 11 (3), pp.20141025. ⟨10.1098/rsbl.2014.1025⟩. ⟨hal-02361616⟩
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E Reynaud, Ll Lahaye, A. Boulanger, Im Petrova, C. Marquilly, et al.. Guidance of Drosophila Mushroom Body Axons Depends upon DRL-Wnt Receptor Cleavage in the Brain Dorsomedial Lineage Precursors. Cell Reports, 2015, 11 (8), pp.1293-1304. ⟨10.1016/j.celrep.2015.04.035⟩. ⟨hal-01159650⟩
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Patricia Rojas-Ríos, Aymeric Chartier, Stéphanie Pierson, Dany Séverac, Christelle Dantec, et al.. Translational Control of Autophagy by Orb in the Drosophila Germline. Developmental Cell, 2015, 35 (5), pp.622-631. ⟨10.1016/j.devcel.2015.11.003⟩. ⟨hal-03388715⟩
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M Rossitto, S. Ujjan, F. Poulat, B. Boizet-Bonhoure. Multiple roles of the prostaglandin D2 signaling pathway in reproduction. Reproduction [Cambridge], 2015, 149 (1), pp.R49-R58. ⟨10.1530/REP-14-0381⟩. ⟨hal-01090233⟩
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M Rossitto, P. Philibert, F. Poulat, B. Boizet-Bonhoure. Molecular events and signalling pathways of male germ cell differentiation in mouse. Seminars in Cell and Developmental Biology, 2015, 45, pp.84-93. ⟨10.1016/j.semcdb.2015.09.014⟩. ⟨hal-01247666⟩
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H Royo, Hervé Seitz, E Elinati, Ah Peters, Mb Stadler, et al.. Silencing of X-Linked MicroRNAs by Meiotic Sex Chromosome Inactivation. PLoS Genetics, 2015, 11 (10), pp.e1005461. ⟨10.1371/journal.pgen.1005461⟩. ⟨hal-01229825⟩
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N. Saksouk, E Simboeck, J. Dejardin. Constitutive heterochromatin formation and transcription in mammals. Epigenetics and Chromatin, 2015, 8 (3), ⟨10.1186/1756-8935-8-3⟩. ⟨hal-01144005⟩
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Serena Sanulli, Neil Justin, Aurélie Teissandier, Katia Ancelin, Manuela Portoso, et al.. Jarid2 Methylation via the PRC2 Complex Regulates H3K27me3 Deposition during Cell Differentiation.. Molecular Cell, 2015, 57 (5), pp.769-783. ⟨10.1016/j.molcel.2014.12.020⟩. ⟨hal-01110498⟩
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A Seckinger, T Meissner, Jérôme Moreaux, V. Benes, J Hillengass, et al.. miRNAs in multiple myeloma - a survival relevant complex regulator of gene expression. Oncotarget, 2015, 6 (36), pp.39165-39183. ⟨10.18632/oncotarget.5381⟩. ⟨hal-01237028⟩
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T Sexton, Giacomo Cavalli. The Role of Chromosome Domains in Shaping the Functional Genome. Cell, 2015, 160 (6), pp.1049-1059. ⟨10.1016/j.cell.2015.02.040⟩. ⟨hal-01153591⟩
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James E. Tarver, Alexandre Cormier, Natalia Pinzón, Richard S. Taylor, Wilfrid Carré, et al.. microRNAs and the evolution of complex multicellularity: identification of a large, diverse complement of microRNAs in the brown alga Ectocarpus. Nucleic Acids Research, 2015, 43 (13), pp.6384-6398. ⟨10.1093/nar/gkv578⟩. ⟨hal-01278012⟩
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Sabine Traver, Philippe Coulombe, Isabelle Peiffer, James R. A. Hutchins, Magali Kitzmann, et al.. MCM9 Is Required for Mammalian DNA Mismatch Repair. Molecular Cell, 2015, 59 (5), pp.831-839. ⟨10.1016/j.molcel.2015.07.010⟩. ⟨hal-02361154⟩
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Jana Travnickova, Vanessa Tran Chau, Emmanuelle Julien, Julio Mateos-Langerak, Catherine Gonzalez, et al.. Primitive macrophages control HSPC mobilization and definitive haematopoiesis. Nature Communications, 2015, 6, pp.6227. ⟨10.1038/ncomms7227⟩. ⟨hal-02087021⟩
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J.M. Vanacker, D. Maiorano. Checking the cycle by ERRβ splice variants. Cell Cycle, 2015, 14 (10), pp.1492-1493. ⟨10.1080/15384101.2015.1024588⟩. ⟨hal-01159651⟩
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J. Vezilier, A. Nicot, Sylvain Gandon, A. Rivero. Plasmodium infection brings forward mosquito oviposition. Biology Letters, 2015, 11 (3), pp.20140840. ⟨10.1098/rsbl.2014.0840⟩. ⟨hal-02361620⟩
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L. Vincent, P. Ceballos, Carine Plassot, J. C. Méniane, P. Quittet, et al.. Factors influencing extramedullary relapse after allogeneic transplantation for multiple myeloma. Blood Cancer Journal, 2015, 5 (8), pp.e341-e341. ⟨10.1038/bcj.2015.48⟩. ⟨hal-01955536⟩
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Dimitrios Vlachakis, Vasileios Megalooikonomou, Paraskevas Fakourelis, Christos Makris, Sophia Kossida. DrugOn: a fully integrated pharmacophore modeling and structure optimization toolkit. PeerJ, 2015, 3, pp.e725. ⟨10.7717/peerj.725⟩. ⟨hal-01163636⟩
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Aliki Xochelli, Andreas Agathangelidis, Ioannis Kavakiotis, Evangelia Minga, Lesley-Ann Sutton, et al.. Immunoglobulin heavy variable (IGHV) genes and alleles: new entities, new names and implications for research and prognostication in chronic lymphocytic leukaemia. Immunogenetics, 2015, 67 (1), pp.61-66. ⟨10.1007/s00251-014-0812-3⟩. ⟨hal-01103637⟩
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Mirjam B Zeisel, Julie Lucifora, William S Mason, Camille Sureau, Jürgen Beck, et al.. Towards an HBV cure: state-of-the-art and unresolved questions-report of the ANRS workshop on HBV cure.. Gut, 2015, 64 (8), pp.1314-26. ⟨10.1136/gutjnl-2014-308943⟩. ⟨hal-01157784⟩
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Journal articles

2014

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Frederic Bantignies, Giacomo Cavalli. Topological organization of Drosophila hox genes using DNA fluorescent in situ hybridization. Methods in Molecular Biology, 2014, 1196, pp.130-120. ⟨10.1007/978-1-4939-1242-1_7⟩. ⟨hal-01059176⟩
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Christel Boutonnet, Pierre-Luc Tanguay, Catherine Julien, Geneviève Rodier, Philippe Coulombe, et al.. Phosphorylation of Ser72 does not regulate the ubiquitin ligase activity and subcellular localization of Skp2. Cell Cycle, 2014, 9 (5), pp.975-979. ⟨10.4161/cc.9.5.10915⟩. ⟨hal-03101801⟩
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C. Brégnard, M. Benkirane, Nadine Laguette. DNA damage repair machinery and HIV escape from innate immune sensing. Frontiers in Microbiology, 2014, 5, pp.176. eCollection 2014. Review. ⟨10.3389/fmicb.2014.00176⟩. ⟨hal-01002708⟩
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Jérôme Buard, Eric Rivals, Denis Dunoyer de Segonzac, Charlotte Garres, Pierre Caminade, et al.. Diversity of Prdm9 Zinc Finger Array in Wild Mice Unravels New Facets of the Evolutionary Turnover of this Coding Minisatellite. PLoS ONE, 2014, 9 (1), pp.e85021. ⟨10.1371/journal.pone.0085021⟩. ⟨hal-00937288⟩
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Bertrand R Caré, Pascal Carrivain, Thierry Forné, Jean-Marc Victor, Annick Lesne. Finite-Size Conformational Transitions: A Unifying Concept Underlying Chromosome Dynamics. Communications in Theoretical Physics, 2014, 62 (4), pp.607-616. ⟨10.1088/0253-6102/62/4/18⟩. ⟨hal-02948467⟩
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Pascal Carrivain, Maria Barbi, Jean-Marc Victor. In Silico Single-Molecule Manipulation of DNA with Rigid Body Dynamics. PLoS Computational Biology, 2014, 10 (2), ⟨10.1371/journal.pcbi.1003456⟩. ⟨hal-01342589⟩
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Giacomo Cavalli. Chromosomes: now in 3D!. Nature Reviews Molecular Cell Biology, 2014, 15 (1), pp.6. ⟨10.1038/nrm3717⟩. ⟨hal-00922042⟩
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Giacomo Cavalli. A RING to Rule Them All: RING1 as Silencer and Activator. Developmental Cell, 2014, 28 (1), pp.1-2. ⟨10.1016/j.devcel.2013.12.015⟩. ⟨hal-00933302⟩
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S. Chambeyron, Hervé Seitz. Insect small non-coding RNA involved in epigenetic regulations. Current Opinion in Insect Science, 2014, 1, pp.1-19. ⟨10.1016/j.cois.2014.05.001⟩. ⟨hal-01057109⟩
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Jia Ming Chang, Paolo Di Tommaso, Cedric Notredame. TCS: A new multiple sequence alignment reliability measure to estimate alignment accuracy and improve phylogenetic tree reconstruction. Molecular Biology and Evolution, 2014, pp.doi: 10.1093/molbev/msu117. ⟨10.1093/molbev/msu117⟩. ⟨hal-00977584⟩
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Thierry Cheutin, Giacomo Cavalli. Polycomb silencing: from linear chromatin domains to 3D chromosome folding. Current Opinion in Genetics and Development, 2014, 25, pp.30-37. ⟨10.1016/j.gde.2013.11.016⟩. ⟨hal-00933305⟩
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S. Ciccarese, G. Vaccarelli, Mp Lefranc, G. Tasco, A. Consiglio, et al.. Characteristics of the somatic hypermutation in the Camelus dromedarius T cell receptor gamma (TRG) and delta (TRD) variable domains. Developmental and Comparative Immunology, 2014, 46 (2), pp.300-313. ⟨10.1016/j.dci.2014.05.001⟩. ⟨hal-01006530⟩
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R. Clifford, T. Louis, P. Robbe, R. Ackroyd, A. Burns, et al.. SAMHD1 is mutated recurrently in chronic lymphocytic leukemia and is involved in response to DNA damage. Blood, 2014, 123 (7), pp.1021-1031. ⟨10.1182/blood-2013-04-490847⟩. ⟨hal-00957496⟩
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F. Cole, Frédéric Baudat, C. Grey, S. Keeney, Bernard de Massy, et al.. Mouse tetrad analysis provides insights into recombination mechanisms and hotspot evolutionary dynamics. Nature Genetics, 2014, 46 (10), pp.1072-1080. ⟨10.1038/ng.3068⟩. ⟨hal-01070045⟩
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Bernard de Massy. Human genetics. Hidden features of human hotspots. Science, 2014, 346 (6211), pp.808-809. ⟨10.1126/science.aaa0612⟩. ⟨hal-01087650⟩
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Constance Delaby, Audrey Gabelle, Philippe Meynier, Vincent Loubiere, Jerome Vialaret, et al.. Development and validation of dried matrix spot sampling for the quantitative determination of amyloid β peptides in cerebrospinal fluid. Clinical Chemistry and Laboratory Medicine, 2014, 52 (5), pp.649-55. ⟨10.1515/cclm-2013-0611⟩. ⟨hal-04681080⟩
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Aurélie Ducroux, Shirine Benhenda, Lise Rivière, O. John Semmes, Monsef Benkirane, et al.. The Tudor Domain Protein Spindlin1 Is Involved in Intrinsic Antiviral Defense against Incoming Hepatitis B Virus and Herpes Simplex Virus Type 1. PLoS Pathogens, 2014, 10, ⟨10.1371/journal.ppat.1004343.s004⟩. ⟨hal-01392864⟩
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C Duquenne, C Psomas, S Gimenez, A Guigues, Mj Carles, et al.. The Two Human CXCR4 Isoforms Display Different HIV Receptor Activities: Consequences for the Emergence of X4 Strains. Journal of Immunology, 2014, 193 (8), pp.4188-4194. ⟨10.4049/jimmunol.1303298⟩. ⟨hal-01074809⟩
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O Fabre, Cyril Breuker, C Amouzou, T. Salehzada, M Kitzmann, et al.. Defects in TLR3 expression and RNase L activation lead to decreased MnSOD expression and insulin resistance in muscle cells of obese people. Cell Death and Disease, 2014, 5, ⟨10.1038/cddis.2014.104⟩. ⟨hal-02536878⟩
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Laura Fontenille, Sylvie Rouquier, Georges Lutfalla, Dominique Giorgi. Microtubule-associated protein 9 (Map9/Asap) is required for the early steps of zebrafish development. Cell Cycle, 2014, 13 (7), pp.1101-1114. ⟨10.4161/cc.27944⟩. ⟨hal-02088317⟩
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G. Gogoladze, M. Grigolava, B. Vishnepolsky, M. Chubinidze, Patrice Duroux, et al.. DBAASP: Database of Antimicrobial Activity and Structure of Peptides. FEMS Microbiology Letters, 2014, 357 (1), pp.63-68. ⟨10.1111/1574-6968.12489⟩. ⟨hal-01057111⟩
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I. Gonzalez, J. Mateos-Langerak, Aubin Thomas, T. Cheutin, Giacomo Cavalli. Identification of Regulators of the Three-Dimensional Polycomb Organization by a Microscopy-Based Genome-wide RNAi Screen. Molecular Cell, 2014, 54 (3), pp.485-499. ⟨10.1016/j.molcel.2014.03.004⟩. ⟨hal-01002712⟩
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T. Grentzinger, S. Chambeyron. Fast and Accurate Method to Purify Small Noncoding RNAs from Drosophila Ovaries.. Methods in Molecular Biology, 2014, 1093, pp.171-182. ⟨10.1007/978-1-62703-694-8_14⟩. ⟨hal-00881087⟩
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James R A Hutchins. What's that gene (or protein)? Online resources for exploring functions of genes, transcripts, and proteins. Molecular Biology of the Cell, 2014, 25 (8), pp.1187-1201. ⟨10.1091/mbc.E13-10-0602⟩. ⟨hal-02354657⟩
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M. Jemaa, N. Morin, P. Cavelier, J. Cau, Jm Strub, et al.. Adult somatic progenitor cells and hematopoiesis in oysters. Journal of Experimental Biology, 2014, 217 (17), pp.3067-3077. ⟨10.1242/jeb.106575⟩. ⟨hal-01059173⟩
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Botagoz Joldybayeva, Paulina Prorok, Inga Grin, Dmitry Zharkov, Alexander Ishenko, et al.. Cloning and Characterization of a Wheat Homologue of Apurinic/Apyrimidinic Endonuclease Ape1L. PLoS ONE, 2014, 9 (3), pp.e92963. ⟨10.1371/journal.pone.0092963⟩. ⟨hal-02393740⟩
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Daniel Jost, Pascal Carrivain, Giacomo Cavalli, Cédric Vaillant. Modeling epigenome folding: formation and dynamics of topologically associated chromatin domains. Nucleic Acids Research, 2014, 42 (15), pp.9556-9561. ⟨10.1093/nar/gku698⟩. ⟨hal-01064092⟩
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Alboukadel Kassambara, Claire Gourzones, S. Sahota, Thierry Rème, Jérôme Moreaux, et al.. A DNA repair pathway score predicts survival in human multiple myeloma: the potential for therapeutic strategy. Oncotarget, 2014, 5 (9), pp.2487-2498. ⟨10.18632/oncotarget.1740⟩. ⟨hal-01006634⟩
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Nadine Laguette, Christelle Brégnard, Pauline Hue, J. Basbous, Ahmad Yatim, et al.. Premature Activation of the SLX4 Complex by Vpr Promotes G2/M Arrest and Escape from Innate Immune Sensing. Cell, 2014, 156 (1-2), pp.134-145. ⟨10.1016/j.cell.2013.12.011⟩. ⟨hal-00957510⟩
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D. Latreille, Lisa Bluy, M. Benkirane, Rosemary Kiernan. Identification of histone 3 variant 2 interacting factors. Nucleic Acids Research, 2014, 42 (6), pp.3542-3550. ⟨10.1093/nar/gkt1355⟩. ⟨hal-00974880⟩
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Mp Lefranc. Immunoinformatics of the V, C, and G Domains: IMGT(®) Definitive System for IG, TR and IgSF, MH, and MhSF. Methods in Molecular Biology, 2014, 1184, pp.59-107. ⟨10.1007/978-1-4939-1115-8_4⟩. ⟨hal-01059182⟩
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Marie-Paule Lefranc. Immunoglobulin and T Cell Receptor Genes: IMGT(®) and the Birth and Rise of Immunoinformatics. Frontiers in Immunology, 2014, 5, pp.22. ⟨10.3389/fimmu.2014.00022⟩. ⟨hal-00957520⟩
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Sylvain Lehmann, Aroa Relaño-Ginès, Sarah Resina, Elsa Brillaud, Danielle Casanova, et al.. Systemic Delivery of siRNA Down Regulates Brain Prion Protein and Ameliorates Neuropathology in Prion Disorder. PLoS ONE, 2014, 9 (2), pp.e88797. ⟨10.1371/journal.pone.0088797⟩. ⟨hal-02507518⟩
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A. Lengronne, P. Pasero. Closing the MCM cycle at replication termination sites. EMBO Reports, 2014, 15 (12), pp.1226-1227. ⟨10.15252/embr.201439774⟩. ⟨hal-01090227⟩
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Yea-Lih Lin, P Pasero. Caught in the Act: R-Loops Are Cleaved by Structure-Specific Endonucleases to Generate DSBs. Molecular Cell, 2014, 56 (6), pp.721-722. ⟨10.1016/j.molcel.2014.12.011⟩. ⟨hal-01100268⟩
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I. Magdalou, Bs Lopez, P. Pasero, Sa Lambert. The causes of replication stress and their consequences on genome stability and cell fate. Seminars in Cell and Developmental Biology, 2014, 30C, pp.154-164. ⟨10.1016/j.semcdb.2014.04.035⟩. ⟨hal-01006536⟩
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Laurent Maïmoun, S. Guillaume, P. Lefebvre, P. Philibert, H. Bertet, et al.. Role of sclerostin and dickkopf-1 in the dramatic alteration in bone mass acquisition in adolescents and young women with recent anorexia nervosa. Journal of Clinical Endocrinology and Metabolism, 2014, 99 (4), pp.E582--90. ⟨10.1210/jc.2013-2565⟩. ⟨hal-01944931⟩
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J. Mejlvang, Y. Feng, C. Alabert, Kj Neelsen, Z. Jasencakova, et al.. New histone supply regulates replication fork speed and PCNA unloading. Journal of Cell Biology, 2014, 204 (1), pp.29-43. ⟨10.1083/jcb.201305017⟩. ⟨hal-00933315⟩
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Pietro Mesirca, J. Alig, Angelo Torrente, J.C Muller, L. Marger, et al.. Cardiac arrhythmia induced by genetic silencing of 'funny' (f) channels is rescued by GIRK4 inactivation. Nature Communications, 2014, 5, pp.4664. ⟨10.1038/ncomms5664⟩. ⟨hal-01059204⟩
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R. Meyer, A. Algazeery, M. Capri, H. Brazier, C. Ferry, et al.. Drosophila Yemanuclein associates with the cohesin and synaptonemal complexes. Journal of Cell Science, 2014, 127 (21), pp.4658-4666. ⟨10.1242/jcs.152520⟩. ⟨hal-02884214⟩
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B. Moniot, S. Ujjan, J. Champagne, H. Hirai, K. Aritake, et al.. Prostaglandin D2 acts through the Dp2 receptor to influence male germ cell differentiation in the foetal mouse testis. Development (Cambridge, England), 2014, 141 (18), pp.3561-3571. ⟨10.1242/dev.103408⟩. ⟨hal-01064085⟩
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Y. Moran, D. Fredman, D. Praher, Xz Li, Lm Wee, et al.. Cnidarian microRNAs frequently regulate targets by cleavage. Genome Research, 2014, 24 (4), pp.651-663. ⟨10.1101/gr.162503.113⟩. ⟨hal-00974890⟩
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Hakim Ouled-Haddou, Hussein Ghamlouch, Aline Regnier, Stephanie Trudel, Didier Herent, et al.. Characterization of a new V gene replacement in the absence of activation-induced cytidine deaminase and its contribution to human B-cell receptor diversity. Immunology, 2014, 141 (2), pp.268-275. ⟨10.1111/imm.12192⟩. ⟨hal-00937347⟩
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M Rahmoun, J Perez, Pa Saunders, B. Boizet-Bonhoure, Bruno Wilhelm, et al.. Anatomical and Molecular Analyses of XY Ovaries from the African Pygmy Mouse Mus minutoides. Sexual Development, 2014, 8 (6), pp.356-363. ⟨10.1159/000368664⟩. ⟨hal-01104925⟩
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B. Recolin, S. van Der Laan, N. Tsanov, D. Maiorano. Molecular mechanisms of DNA replication checkpoint activation. Genes, 2014, 5 (1), pp.147-175. ⟨10.3390/genes5010147⟩. ⟨hal-00985052⟩
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Aroa Relaño-Ginès, Sylvain Lehmann, Carole Crozet. Prion diseases and adult neurogenesis: How do prions counteract the brain's endogenous repair machinery?. Prion, 2014, 8 (3), pp.240-246. ⟨10.4161/pri.29021⟩. ⟨hal-03171673⟩
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Marc A Rodger, William M Hague, John Kingdom, Susan R Kahn, Alan Karovitch, et al.. Antepartum dalteparin versus no antepartum dalteparin for the prevention of pregnancy complications in pregnant women with thrombophilia (TIPPS): a multinational open-label randomised trial. The Lancet, 2014, 384 (9955), ⟨10.1016/S0140-6736(14)60793-5⟩. ⟨hal-01258557⟩
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Sylvie Rouquier, Marie-Jeanne Pillaire, Christophe Cazaux, Dominique Giorgi. Expression of the microtubule-associated protein MAP9/ASAP and its partners AURKA and PLK1 in colorectal and breast cancers. Disease Markers, 2014, 2014, pp.798170. ⟨10.1155/2014/798170⟩. ⟨hal-01059231⟩
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N. Saksouk, Tk Barth, Céline Ziegler-Birling, N Olova, A. Nowak, et al.. Redundant Mechanisms to Form Silent Chromatin at Pericentromeric Regions Rely on BEND3 and DNA Methylation. Molecular Cell, 2014, 56 (4), pp.580-594. ⟨10.1016/j.molcel.2014.10.001⟩. ⟨hal-01091064⟩
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B. Schuettengruber, N Oded Elkayam, T Sexton, M Entrevan, S Stern, et al.. Cooperativity, specificity, and evolutionary stability of polycomb targeting in Drosophila. Cell Reports, 2014, 9 (1), pp.219-233. ⟨10.1016/j.celrep.2014.08.072⟩. ⟨hal-01074508⟩
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Y. J. Sheu, Jb Kinney, A. Lengronne, P. Pasero, B. Stillman. Domain within the helicase subunit Mcm4 integrates multiple kinase signals to control DNA replication initiation and fork progression. Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (18), pp.E1899-1908. ⟨10.1073/pnas.1404063111⟩. ⟨hal-01006631⟩
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Hiroki Shirai, Catherine Prades, Randi Vita, Paolo Marcatili, Bojana Popovic, et al.. Antibody informatics for drug discovery. BBA - Biochimica et Biophysica Acta, 2014, 1844 (11), pp.2002-2015. ⟨10.1016/j.bbapap.2014.07.006⟩. ⟨hal-01088585⟩
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M. Simonelig. piRNAs, master regulators of gene expression. Cell Research, 2014, 24 (7), pp.779-780. ⟨10.1038/cr.2014.78⟩. ⟨hal-01057116⟩
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Bernd Stadelmayer, Gaël Micas, Adrien Gamot, Pascal G.P. Martin, Nathalie Malirat, et al.. Integrator complex regulates NELF-mediated RNA polymerase II pause/release and processivity at coding genes. Nature Communications, 2014, 5, pp.5531. ⟨10.1038/ncomms6531⟩. ⟨hal-02641024⟩
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C. Temme, M. Simonelig, E. Wahle. Deadenylation of mRNA by the CCR4-NOT complex in Drosophila: molecular and developmental aspects. Frontiers in Genetics, 2014, 5, pp.143. ⟨10.3389/fgene.2014.00143⟩. ⟨hal-01006626⟩
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A Trimarco, Mg Forese, V Alfieri, A Lucente, Paolo Brambilla, et al.. Prostaglandin D2 synthase/GPR44: a signaling axis in PNS myelination. Nature Neuroscience, 2014, 17 (12), pp.1682-1692. ⟨10.1038/nn.3857⟩. ⟨hal-01090263⟩
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Nikolay Tsanov, Chames Kermi, P. Coulombe, Siem van Der Laan, Dana Hodroj, et al.. PIP degron proteins, substrates of CRL4Cdt2, and not PIP boxes, interfere with DNA polymerase η and κ focus formation on UV damage. Nucleic Acids Research, 2014, 42 (6), pp.3692-3706. ⟨10.1093/nar/gkt1400⟩. ⟨hal-00975187⟩
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S. van Der Laan, D. Maiorano. Post-translational modifications in embryonic cell cycle. Cell Cycle, 2014, 13, pp.9. ⟨10.4161/cc.28750⟩. ⟨hal-00974895⟩
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S. van Der Laan, E. Golfetto, Jean-Marc Vanacker, D. Maiorano. Cell Cycle-Dependent Expression of Dub3, Nanog and the p160 Family of Nuclear Receptor Coactivators (NCoAs) in Mouse Embryonic Stem Cells. PLoS ONE, 2014, 9 (4), pp.e93663. ⟨10.1371/journal.pone.0093663⟩. ⟨hal-00974899⟩
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Victoria Viart, Anne Bergougnoux, Jennifer Bonini, Jessica Varilh, Raphaël Chiron, et al.. Transcription factors and miRNAs that regulate fetal to adult CFTR expression change are new targets for cystic fibrosis. European Respiratory Journal, 2014, 45 (1), pp.116 - 128. ⟨10.1183/09031936.00113214⟩. ⟨hal-03953369⟩
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K. Yoshida, J. Bacal, D. Desmarais, I. Padioleau, O. Tsaponina, et al.. The histone deacetylases sir2 and rpd3 act on ribosomal DNA to control the replication program in budding yeast. Molecular Cell, 2014, 54 (4), pp.691-697. ⟨10.1016/j.molcel.2014.04.032⟩. ⟨hal-01002684⟩
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Journal articles

2013

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Abdou Akkouche, Thomas Grentzinger, Marie Fablet, Claudia Armenise, Nelly Burlet, et al.. Maternally deposited germline piRNAs silence the tirant retrotransposon in somatic cells. EMBO Reports, 2013, 14 (5), pp.458-64. ⟨10.1038/embor.2013.38⟩. ⟨hal-00850319⟩
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Frederic Bantignies. Three-dimensional genome organization: a lesson from the Polycomb-Group proteins. Biologie Aujourd'hui, 2013, 207 (1), pp.19-31. ⟨10.1051/jbio/2013002⟩. ⟨hal-00881529⟩
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B. Barckmann, M. Simonelig. Control of maternal mRNA stability in germ cells and early embryos. BBA - Biochimica et Biophysica Acta, 2013, 1829 (6-7), pp.714-724. ⟨10.1016/j.bbagrm.2012.12.011⟩. ⟨hal-00824357⟩
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Frédéric Baudat, Y. Imai, Bernard de Massy. Meiotic recombination in mammals: localization and regulation. Nature Reviews Genetics, 2013, 14 (11), pp.794-806. ⟨10.1038/nrg3573⟩. ⟨hal-00875210⟩
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Shirine Benhenda, Aurélie Ducroux, Lise Rivière, Bijan Sobhian, Michael Ward, et al.. Methyltransferase PRMT1 is a binding partner of HBx and a negative regulator of hepatitis B virus transcription. Journal of Virology, 2013, 87 (8), pp.4360-4371. ⟨10.1128/JVI.02574-12⟩. ⟨hal-00817739⟩
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B. Berkhout, A. Lever, M. Wainberg, A. Fassati, P. Borrow, et al.. Monsef Benkirane awarded 2013 Ming K. Jeang Foundation Retrovirology Prize: Landmark HIV-1 research honoured. Retrovirology, 2013, 10 (1), pp.38. ⟨10.1186/1742-4690-10-38⟩. ⟨hal-00817751⟩
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R. Bétous, Mj Pillaire, L. Pierini, S. van Der Laan, B. Recolin, et al.. DNA polymerase k-dependent DNA synthesis at stalled replication forks is important for Chk1 activation. EMBO Journal, 2013, 32 (15), pp.2172-2185. ⟨10.1038/emboj.2013.148⟩. ⟨hal-00852739⟩
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Valérie Borde, Bernard de Massy. Programmed induction of DNA double strand breaks during meiosis: setting up communication between DNA and the chromosome structure. Current Opinion in Genetics and Development, 2013, 23 (2), pp.147-155. ⟨10.1016/j.gde.2012.12.002⟩. ⟨hal-00824360⟩
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Emilie Brasset, S. Chambeyron. Epigenetics and transgenerational inheritance. Genome Biology, 2013, 14 (5), pp.306. ⟨10.1186/gb-2013-14-5-306⟩. ⟨hal-00852741⟩
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P. Callier, B. Aral, N. Hanna, S. Lambert, H. Dindy, et al.. Systematic molecular and cytogenetic screening of 100 patients with marfanoid syndromes and intellectual disability. Clinical Genetics, 2013, 84 (6), pp.507--521. ⟨10.1111/cge.12094⟩. ⟨hal-01068032⟩
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F. Carofiglio, A. Inagaki, S. de Vries, E. Wassenaar, S. Schoenmakers, et al.. SPO11-independent DNA repair foci and their role in meiotic silencing. PLoS Genetics, 2013, 9 (6), pp.e1003538. ⟨10.1371/journal.pgen.1003538⟩. ⟨hal-00852744⟩
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Rosario Castro, Luc Jouneau, Hang Phuong Pham, Olivier Bouchez, Véronique Giudicelli, et al.. Teleost Fish Mount Complex Clonal IgM and IgT Responses in Spleen upon Systemic Viral Infection. PLoS Pathogens, 2013, 9 (1), pp.e1003098. ⟨10.1371/journal.ppat.1003098⟩. ⟨hal-00779835⟩
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Giacomo Cavalli, T. Mistelli. Functional implications of genome topology. Nature Structural and Molecular Biology, 2013, 20 (3), pp.290-299. ⟨10.1038/nsmb.2474⟩. ⟨hal-00797832⟩
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A. Chartier, M. Simonelig. Animal models in therapeutic drug discovery for oculopharyngeal muscular dystrophy. Drug Discovery Today: Technologies, 2013, 10 (1), pp.e103-108. ⟨10.1016/j.ddtec.2012.07.002⟩. ⟨hal-00878992⟩
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A. L. Chesnais, E. Niaf, F. Bratan, F. Mège-Lechevallier, S. Roche, et al.. Differentiation of transitional zone prostate cancer from benign hyperplasia nodules: evaluation of discriminant criteria at multiparametric MRI. Clinical Radiology, 2013, 68, pp.e323-30. ⟨10.1016/j.crad.2013.01.018⟩. ⟨hal-02168098⟩
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Julie a J Clément, T. K. Baldwin, Hélène Magalon, I. Glais, Cécile Gracianne, et al.. Specific detection and quantification of virulent/avirulent Phytophthora infestans isolates using a real-time PCR assay that targets polymorphisms of the Avr3a gene.. Letters in Applied Microbiology, 2013, 56 (5), pp.322-32. ⟨10.1111/lam.12047⟩. ⟨hal-00941608⟩
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Julie a J Clément, Eve Toulza, Mathieu Gautier, Hugues Parrinello, David Roquis, et al.. Private Selective Sweeps Identified from Next-Generation Pool-Sequencing Reveal Convergent Pathways under Selection in Two Inbred Schistosoma mansoni Strains.. PLoS Neglected Tropical Diseases, 2013, 7 (12), pp.e2591. ⟨10.1371/journal.pntd.0002591⟩. ⟨hal-00938922⟩
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Xavier Contreras, M. Benkirane, Rosemary Kiernan. Premature termination of transcription by RNAP II: The beginning of the end. Transcription, 2013, 4 (2), pp.72-76. ⟨10.4161/trns.24148⟩. ⟨hal-00852755⟩
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P. Coulombe, Grégoire David, N. Tsanov, M. Mechali. A spontaneous Cdt1 mutation in 129 mouse strains reveals a regulatory domain restraining replication licensing. Nature Communications, 2013, 4, pp.2065. ⟨10.1038/ncomms3065⟩. ⟨hal-00852756⟩
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Philippe Coulombe, Damien Grégoire, Nikolay Tsanov, Marcel Méchali. A spontaneous Cdt1 mutation in 129 mouse strains reveals a regulatory domain restraining replication licensing. Nature Communications, 2013, 4, pp.2065. ⟨10.1038/ncomms3065⟩. ⟨hal-04443145⟩
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A. Cribier, B. Descours, Al Chaves Valadeo, Nadine Laguette, M. Benkirane. Phosphorylation of SAMHD1 by CyclinA2/CDK1 regulates its restriction activity towards HIV-1. Cell Reports, 2013, 3 (4), pp.1036-1043. ⟨10.1016/j.celrep.2013.03.017⟩. ⟨hal-00820211⟩
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N. Crosetto, A. Mitra, Mj Silva, M. Bienko, N. Dojer, et al.. Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing. Current Opinion in Genetics and Development, 2013, 10 (4), pp.361-365. ⟨10.1038/nmeth.2408⟩. ⟨hal-00820214⟩
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Bernard de Massy. Initation of Meiotic Recombination: How and Where? Conversation and Specificities Among Eukaryotes. Annual Review of Genetics, 2013, 47, pp.563-599. ⟨10.1146/annurev-genet-110711-155423⟩. ⟨hal-00916435⟩
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Bernard de Massy. Spp1 links sites of meiotic DNA double-strand breaks to chromosome axes. Molecular Cell, 2013, 49 (1), pp.3-5. ⟨10.1016/j.molcel.2012.12.011⟩. ⟨hal-00779841⟩
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Agathe Eckenfelder, Natalia Pinzon Restrepo, Damien Ulveling, Jean-François Zagury, Hervé Seitz, et al.. Identification of HIV-1 sequences targeted by the miRNA Induced silencing complex (miRISC) using Argonaute 2 cross-linking and immunoprecipitation (HITS-CLIP). Retrovirology, 2013, 10 (Suppl 1), pp.P33. ⟨10.1186/1742-4690-10-S1-P33⟩. ⟨inserm-00868809⟩
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Jean-Bernard Fiche, Diego Cattoni, Nele Diekmann, Julio Mateos Langerak, Caroline Clerte, et al.. Recruitment, Assembly, and Molecular Architecture of the SpoIIIE DNA Pump Revealed by Superresolution Microscopy. PLoS Biology, 2013, 11 (5), pp.e1001557. ⟨10.1371/journal.pbio.1001557⟩. ⟨hal-03273727⟩
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C. Franckhauser, Arnaud Fernandez, Nj Lamb. Purification and biochemical analysis of catalytically active human cdc25C dual specificity phosphatase. Biochimie, 2013, 95 (7), pp.1450-1461. ⟨10.1016/j.biochi.2013.03.011⟩. ⟨hal-00852761⟩
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Lisa Heron-Milhavet, Céline Franckhauser, Anne Fernandez, Ned J. Lamb. Characterization of the Akt2 Domain Essential for Binding Nuclear p21cip1 to Promote Cell Cycle Arrest during Myogenic Differentiation. PLoS ONE, 2013, 8 (10), pp.e76987. ⟨10.1371/journal.pone.0076987⟩. ⟨hal-00906356⟩
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A. Hua, M. Namdar, O. Ganier, J. Gregan, M. Mechali, et al.. Sequential steps in DNA replication are inhibited to ensure reduction of ploidy in meiosis.. Molecular Biology of the Cell, 2013, 24 (5), pp.578-587. ⟨10.1091/mbc.E12-11-0825⟩. ⟨hal-00797834⟩
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M Humbertclaude, D. Hamroun, M. Picot, B Bezzou, C. Bérard, et al.. [Phenotypic heterogeneity and phenotype-genotype correlations in dystrophinopathies: Contribution of genetic and clinical databases].. Revue Neurologique, 2013, 169 (8-9), pp.583 - 594. ⟨10.1016/j.neurol.2013.04.004⟩. ⟨hal-01681803⟩
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N. Iovino, F. Ciabrelli, Giacomo Cavalli. PRC2 Controls Drosophila Oocyte Cell Fate by Repressing Cell Cycle Genes. Developmental Cell, 2013, 26 (4), pp.431-439. ⟨10.1016/j.devcel.2013.06.021⟩. ⟨hal-00875218⟩
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A. Ishmukhametova, Jm Chen, R. Bernard, Bernard de Massy, Frédéric Baudat, et al.. Dissecting the Structure and Mechanism of a Complex Duplication-Triplication Rearrangement in the DMD Gene. Human Mutation, 2013, 34 (8), pp.1080-1084. ⟨10.1002/humu.22353⟩. ⟨hal-00852768⟩
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W. Joly, A. Chartier, Patricia Rojas-Ríos, I. Busseau, M. Simonelig. The CCR4 Deadenylase Acts with Nanos and Pumilio in the Fine-Tuning of Mei-P26 Expression to Promote Germline Stem Cell Self-Renewal. Stem Cell Reports, 2013, 1 (5), pp.411-424. ⟨10.1016/j.stemcr.2013.09.007⟩. ⟨hal-00916446⟩
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Marcel M. Lambrechts, Matthieu Abouladzé, Michel Bonnet, Virginie Demeyrier, Claire Doutrelant, et al.. Nest-box size influences where secondary-cavity exploiters roost and nest: a choice experiment. Journal für Ornithologie = Journal of Ornithology, 2013, 154 (2), pp.563-566. ⟨10.1007/s10336-012-0919-y⟩. ⟨hal-04261754⟩
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B. Leblanc, Stéphane Brunel. Les experts inégaux face à la communication de leurs savoirs. Hermès, La Revue - Cognition, communication, politique, 2013, 66, pp.135. ⟨10.4267/2042/51577⟩. ⟨hal-00949475⟩
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S. Lehmann, C. Delaby, J. Touchon, C. Hirtz, A. Gabelle. Biomarkers of Alzheimer's disease: The present and the future. Revue Neurologique, 2013, 169 (10), pp.719-723. ⟨10.1016/j.neurol.2013.07.012⟩. ⟨hal-04680842⟩
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Shuo Li, Marie-Paule Lefranc, John Miles, Eltaf Alamyar, Véronique Giudicelli, et al.. IMGT/HighV QUEST paradigm for T cell receptor IMGT clonotype diversity and next generation repertoire immunoprofiling. Nature Communications, 2013, 4 (1), pp.2333. ⟨10.1038/ncomms3333⟩. ⟨hal-00875260⟩
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Gérald Lossaint, Marion Larroque, Cyril Ribeyre, Nicole Bec, Christian Larroque, et al.. FANCD2 Binds MCM Proteins and Controls Replisome Function upon Activation of S Phase Checkpoint Signaling. Molecular Cell, 2013, 51 (5), pp.678-690. ⟨10.1016/j.molcel.2013.07.023⟩. ⟨hal-00876639⟩
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D. Maiorano, Js Hoffman. Pol κ in replication checkpoint. Cell Cycle, 2013, 12 (24), pp.1-2. ⟨10.4161/cc.26976⟩. ⟨hal-00881391⟩
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Alexandre Martiniere, Aurélie Bak, Jean Luc Macia, Nicole Lautredou, Daniel Gargani, et al.. A virus responds instantly to the presence of the vector on the host and forms transmission morphs. eLife, 2013, 2, ⟨10.7554/eLife.00183⟩. ⟨hal-01837535⟩
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M. Mechali, K. Yoshida, P. Coulombe, P. Pasero. Genetic and epigenetic determinants of DNA replication origins, position and activation. Current Opinion in Genetics and Development, 2013, 23 (2), pp.124-131. ⟨10.1016/j.gde.2013.02.010⟩. ⟨hal-00824364⟩
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D. Mouhtadi, A. Amahmid, M. Hasnaoui, E. H. Kadri, R. Bennacer. Analysis of the Validity of a Constant Surface Heat Flux Model for the Case of Blocks Submitted to Uniform Volumetric Heat Generation and Periodically Mounted on the Lower Wall of a Horizontal Channel. Numerical Heat Transfer, Part A Applications, 2013, 65 (1), pp.26 - 47. ⟨10.1080/10407782.2013.812003⟩. ⟨hal-01684913⟩
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Guillermo A Orsi, Ahmed Algazeery, Regis Meyer, Michèle Capri, Laure M Sapey-Triomphe, et al.. Drosophila Yemanuclein and HIRA Cooperate for De Novo Assembly of H3.3-Containing Nucleosomes in the Male Pronucleus. PLoS Genetics, 2013, 9 (2), pp.e1003285. ⟨10.1371/journal.pgen.1003285⟩. ⟨hal-02552024⟩
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P. Philibert, B. Boizet-Bonhoure, A. Basmaboo, F. Paris, K. Aritake, et al.. Unilateral Cryptorchidism in Mice Mutant for Ptgds. Human Mutation, 2013, 34 (2), pp.278-282. ⟨10.1002/humu.22231⟩. ⟨hal-00783212⟩
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C. Psomas, Jp Lavigne, C. Barbuat, Saber Trabelsi, J. Ghosn, et al.. Maraviroc-induced decrease in circulating bacterial products is not linked to an increase in immune activation in HIV-infected individuals. Blood, 2013, 122 (3), pp.2282-2286. ⟨10.1182/blood-2013-06-507012⟩. ⟨hal-00875241⟩
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Aroa Relaño-Ginès, Audrey Gabelle, Claire Hamela, Maxime Belondrade, Danielle Casanova, et al.. Prion replication occurs in endogenous adult neural stem cells and alters their neuronal fate: involvement of endogenous neural stem cells in prion diseases.. PLoS Pathogens, 2013, 9 (8), pp.e1003485. ⟨10.1371/journal.ppat.1003485⟩. ⟨inserm-00854035⟩
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A. Reynolds, H. Qiao, Y. Yang, Jk Chen, N. Jackson, et al.. RNF212 is a dosage-sensitive regulator of crossing-over during mammalian meiosis.. Nature Genetics, 2013, 45 (3), pp.269-278. ⟨10.1038/ng.2541⟩. ⟨hal-00797837⟩
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Stephane Roche, Gianluca d'Ippolito, Adriana L. Gomez, Thomas Bouckenooghe, Sylvain Lehmann, et al.. Comparative analysis of protein expression of three stem cell populations: models of cytokine delivery system in vivo.. International Journal of Pharmaceutics, 2013, 440 (1), pp.72-82. ⟨10.1016/j.ijpharm.2011.12.041⟩. ⟨inserm-00802595v2⟩
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A Rugale, C. Oudot, C. Desmetz, C. Guzman, A. Lajoix, et al.. [Sodium restriction prevents cardiovascular remodeling associated with insulin-resistance in the rat].. Annales de Cardiologie et d'Angéiologie, 2013, 62 (3), pp.139 - 143. ⟨10.1016/j.ancard.2013.03.001⟩. ⟨hal-01904726⟩
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Diego Sánchez-Martínez, Ewelina Krzywinska, Moeez G. Rathore, Anne Saumet, Amélie Cornillon, et al.. MicroRNAs: new candidates for the regulation of the human cumulus–oocyte complex. Human Reproduction, 2013, 28 (11), pp.3038-3049. ⟨10.1093/humrep/det321⟩. ⟨hal-02106446⟩
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A. Schmith, M. Groth, J. Ratka, S. Gatz, T. Spaller, et al.. Conserved gene-regulatory function of the carboxy-terminal domain of dictyostelid C-module-binding factor. Eukaryotic Cell, 2013, 12 (3), pp.460-468. ⟨10.1128/EC.00329-12⟩. ⟨hal-00797838⟩
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B. Schuettengruber, Giacomo Cavalli. Polycomb domain formation depends on short and long distance regulatory cues. PLoS ONE, 2013, 8 (2), pp.e56531. ⟨10.1371/journal.pone.0056531⟩. ⟨hal-00795032⟩
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Violette Senille, Dominique Lelievre, Françoise Paquet, Norbert Garnier, Ned Lamb, et al.. The addressing fragment of mitogaligin: first insights into functional and structural properties.. ChemBioChem, 2013, 14 (6), pp.711-20. ⟨10.1002/cbic.201200715⟩. ⟨hal-00817503⟩
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A. Sergeeva, Np Restrepo, Hervé Seitz. Quantitative aspects of RNA silencing in metazoans. Биохимия / Biochemistry, 2013, 78 (6), pp.613-626. ⟨10.1134/S0006297913060072⟩. ⟨hal-00855222⟩
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T. Sexton, Giacomo Cavalli. The 3D Genome Shapes Up For Pluripotency. Cell Stem Cell, 2013, 13 (1), pp.3-4. ⟨10.1016/j.stem.2013.06.013⟩. ⟨hal-00852770⟩
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Tianlai Shi, Richard d. Bunker, Stefano Mattarocci, Cyril Ribeyre, Mahamadou Faty, et al.. Rif1 and Rif2 Shape Telomere Function and Architecture through Multivalent Rap1 Interactions. Cell, 2013, 153 (6), pp.1340-1353. ⟨10.1016/j.cell.2013.05.007⟩. ⟨hal-02553041⟩
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Adrien Six, Maria Encarnita Mariotti-Ferrandiz, Wahiba Chaara, Marie-Paule Lefranc, Susana Magadan, et al.. The Past, Present, and Future of Immune Repertoire Biology – The Rise of Next-Generation Repertoire Analysis. Frontiers in Immunology, 2013, 4, pp.413. ⟨10.3389/fimmu.2013.00413⟩. ⟨hal-01561010⟩
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Am Sokol, S. Cruet-Hennequart, P. Pasero, Mp Carty. DNA polymerase η modulates replication fork progression and DNA damage responses in platinum-treated human cells. Scientific Reports, 2013, 3, pp.3277. ⟨10.1038/srep03277⟩. ⟨hal-00916433⟩
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A. Soldano, Z. Okray, P. Janovska, K. Tmejová, E. Reynaud, et al.. The Drosophila Homologue of the Amyloid Precursor Protein Is a Conserved Modulator of Wnt PCP Signaling. PLoS Biology, 2013, 11 (5), pp.e1001562. ⟨10.1371/journal.pbio.1001562⟩. ⟨hal-00825409⟩
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M. Soumillon, A. Necsulea, M. Weier, D. Brawand, X. Zhang, et al.. Cellular Source and Mechanisms of High Transcriptome Complexity in the Mammalian Testis. Cell Reports, 2013, 3 (6), pp.2179-2190. ⟨10.1016/j.celrep.2013.05.031⟩. ⟨hal-00852777⟩
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Amos Tanay, Giacomo Cavalli. Chromosomal domains: epigenetic contexts and functional implications of genomic compartmentalization. Current Opinion in Genetics and Development, 2013, 23 (2), pp.197-203. ⟨10.1016/j.gde.2012.12.009⟩. ⟨hal-00824371⟩
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Siem van Der Laan, Nicolay Tsanov, Carole Crozet, Domenico Maiorano. High Dub3 expression in mouse ESC couples the G1/S checkpoint to pluripotency. Molecular Cell, 2013, 52 (3), pp.366-379. ⟨10.1016/j.molcel.2013.10.003⟩. ⟨hal-00916442⟩
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Sophie Vidal-Eychenié, Chantal Décaillet, J. Basbous, Angelos Constantinou. DNA structure-specific priming of ATR activation by DNA-PKcs. Journal of Cell Biology, 2013, 202 (3), pp.421-429. ⟨10.1083/jcb.201304139⟩. ⟨hal-00852781⟩
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H. Wu, N. Mathioudakis, B. Diagouraga, A. Dong, L. Dombrovski, et al.. Molecular Basis for the Regulation of the H3K4 Methyltransferase Activity of PRDM9. Cell Reports, 2013, 5 (1), pp.13-20. ⟨10.1016/j.celrep.2013.08.035⟩. ⟨hal-00876628⟩
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Jt Yeeles, J. Poli, Kj Marians, P. Pasero. Rescuing stalled or damaged replication forks. Cold Spring Harbor Perspectives in Biology, 2013, 5, pp.5. ⟨10.1101/cshperspect.a012815⟩. ⟨hal-00820216⟩
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J. Zinn, D. Cheng, N. Dhanyasi, J. Cho, Jm Dura, et al.. Ecdysone signaling at metamorphosis triggers apoptosis of Drosophila abdominal muscles. Developmental Biology, 2013, 383 (2), pp.375-384. ⟨10.1016/j.ydbio.2013.08.029⟩. ⟨hal-00876621⟩
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Journal articles

2012

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Abdou Akkouche, Rita Rebollo, Nelly Burlet, Caroline Esnault, Sonia Martinez, et al.. tirant, a newly discovered active endogenous retrovirus in Drosophila simulans.. Journal of Virology, 2012, 86 (7), pp.3675-3681. ⟨10.1128/JVI.07146-11⟩. ⟨hal-00763499⟩
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Eltaf Alamyar, Véronique Giudicelli, Shuo Li, Patrice Duroux, Marie-Paule Lefranc. IMGT/HighV-QUEST: the IMGT® web portal for immunoglobulin (IG) or antibody and T cell receptor (TR) analysis from NGS high throughput and deep sequencing. Immunome Research, 2012, 8 (1), pp.26. ⟨10.4172/1745-7580.1000056⟩. ⟨hal-00722909⟩
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Eltaf Alamyar, Patrice Duroux, Marie-Paule Lefranc, Véronique Giudicelli. IMGT(®) tools for the nucleotide analysis of immunoglobulin (IG) and T cell receptor (TR) V-(D)-J repertoires, polymorphisms, and IG mutations: IMGT/V-QUEST and IMGT/HighV-QUEST for NGS.. Methods in Molecular Biology, 2012, 882, pp.569-604. ⟨10.1007/978-1-61779-842-9_32⟩. ⟨hal-00722893⟩
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C. Allera-Moreau, I. Rouquette, B. Lepage, N. Oumouhou, M. Walschaerts, et al.. DNA replication stress response involving PLK1, CDC6, POLQ, RAD51 and CLASPIN upregulation prognoses the outcome of early/mid-stage non-small cell lung cancer patients. Oncogenesis, 2012, 1, pp.e30. ⟨10.1038/oncsis.2012.29⟩. ⟨hal-00817701⟩
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N. Avvakumov, M.-E. Lalonde, N. Saksouk, E. Paquet, K. Glass, et al.. Conserved Molecular Interactions within the HBO1 Acetyltransferase Complexes Regulate Cell Proliferation. Molecular and Cellular Biology, 2012, 32 (3), pp.689-703. ⟨10.1128/mcb.06455-11⟩. ⟨hal-02154207⟩
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Mehdi Badra, J.-M. Buchot, L. Thevenet. Méthode de pénalisation pour le contrôle frontière des équations de Navier-Stokes. Journal Européen des Systèmes Automatisés, 2012, 45 (7-8-9-10), pp.595--630. ⟨hal-00868267⟩
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J. Basbous, Dora Knani, Nathalie Bonneaud, Dominique Giorgi, Jean-Marc Brondello, et al.. Induction of ASAP (MAP9) contributes to p53 stabilization in response to DNA damage. Cell Cycle, 2012, 11 (12), pp.2380-9012. ⟨10.4161/cc.20858⟩. ⟨hal-00705749⟩
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Jn Bianco, J. Poli, J. Saksouk, J. Bacal, Mj Silva, et al.. Analysis of DNA replication profiles in budding yeast and mammalian cells using DNA combing. Methods, 2012, 57 (2), pp.149-157. ⟨10.1016/j.ymeth.2012.04.007⟩. ⟨hal-00733285⟩
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S. Bocquet, P. Sagaut, J. Jouhaud. A compressible wall model for large-eddy simulation with application to prediction of aerothermal quantities. Physics of Fluids, 2012, 24 (6), pp.065103. ⟨10.1063/1.4729614⟩. ⟨hal-01298920⟩
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Guillaume Bompard, G. Rabeharivelo, J. Cau, Ariane Abrieu, C. Delsert, et al.. P21-activated kinase 4 (PAK4) is required for metaphase spindle positioning and anchoring.. Oncogene, 2012, 32, pp.910-919. ⟨10.1038/onc.2012.98⟩. ⟨hal-00714839⟩
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Guillaume Bompard, Nathalie Morin. p21-activated kinase 4 regulates mitotic spindle positioning and orientation. BioArchitecture, 2012, 2 (4), pp.130-133. ⟨10.4161/bioa.21132⟩. ⟨hal-05234994⟩
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A. Boulanger, M. Farge, C. Ramanoudjame, K. Wharton, Jm Dura. Drosophila Motor Neuron Retraction during Metamorphosis Is Mediated by Inputs from TGF-β/BMP Signaling and Orphan Nuclear Receptors. PLoS ONE, 2012, 7 (7), pp.e40255. ⟨10.1371/journal.pone.0040255⟩. ⟨hal-00722911⟩
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A. Brandariz-Nuñez, J. C. Valle-Casuso, T. E. White, Nadine Laguette, M. Benkirane, et al.. Role of SAMHD1 nuclear localization in restriction of HIV-1 and SIVmac. Retrovirology, 2012, 9 (1), pp.49. ⟨10.1186/1742-4690-9-49⟩. ⟨hal-00722913⟩
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F. Buonocore, R. Castro, E. Randelli, Mp Lefranc, A. Six, et al.. Diversity, molecular characterization and expression of T cell receptor gamma in a teleost fish, the sea bass (Dicentrarchus labrax, L). PLoS ONE, 2012, 7 (10), pp.e47957. ⟨10.1371/journal.pone.0047957⟩. ⟨hal-00750236⟩
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Giacomo Cavalli. Molecular biology. EZH2 goes solo. Science, 2012, 338 (6113), pp.1430-1431. ⟨10.1126/science.1232332⟩. ⟨hal-00767136⟩
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C Cayrou, Damien Gregoire, Philippe Coulombe, Etienne Danis, Marcel Méchali. Genome-scale identification of active DNA replication origins. Methods, 2012, 57 (2), pp.158-164. ⟨10.1016/j.ymeth.2012.06.015⟩. ⟨hal-00733286⟩
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C Cayrou, Philippe Coulombe, Aurore Puy, Stéphanie Rialle, Noam Kaplan, et al.. New insights into replication origin characteristics in metazoans. Cell Cycle, 2012, 11 (4), pp.658-67. ⟨10.4161/cc.11.4.19097⟩. ⟨hal-00668750⟩
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Thierry Cheutin, Giacomo Cavalli. Progressive Polycomb Assembly on H3K27me3 Compartments Generates Polycomb Bodies with Developmentally Regulated Motion. PLoS Genetics, 2012, 8, pp.e1002465. ⟨10.1371/journal.pgen.1002465⟩. ⟨hal-00668754⟩
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Christelle Clouet-Redt, S. Trannoy, A. Boulanger, E. Tokmatcheva, E. Savvateeva-Popova, et al.. Mushroom body neuronal remodelling is necessary for short-term but not for long-term courtship memory in Drosophila. European Journal of Neuroscience, 2012, 35 (11), pp.1684-1691. ⟨10.1111/j.1460-9568.2012.08103.x⟩. ⟨hal-00705765⟩
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A. Constantinou. Rescue of replication failure by Fanconi anaemia proteins. Chromosoma Biology of the Nucleus, 2012, 121 (1), pp.21-26. ⟨10.1007/s00412-011-0349-2⟩. ⟨hal-00668756⟩
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Xavier Contreras, Olfa Mzoughi, Fabrice Gaston, Matija Peterlin, Elmostafa Bahraoui. Protein kinase C-delta regulates HIV-1 replication at an early post-entry step in macrophages.. Retrovirology, 2012, 9 (1), pp.37. ⟨10.1186/1742-4690-9-37⟩. ⟨inserm-00727309⟩
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L. Cuzin, Saber Trabelsi, Pierre Delobel, C. Barbuat, J. Reynes, et al.. Maraviroc intensification of stable antiviral therapy in HIV-1-infected patients with poor immune restoration: MARIMUNO-ANRS 145 study.. Journal of Acquired Immune Deficiency Syndromes - JAIDS, 2012, 61 (5), pp.557-564. ⟨10.1097/QAI.0b013e318273015f⟩. ⟨hal-00767144⟩
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Célia Dechavanne, François Guillonneau, Giovanni Chiappetta, Laïla Sago, Prisca Lévy, et al.. Mass spectrometry detection of G3m and IGHG3 alleles and follow-up of differential mother and neonate IgG3.. PLoS ONE, 2012, 7 (9), pp.e46097. ⟨10.1371/journal.pone.0046097⟩. ⟨hal-00858141⟩
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A. Delest, T. Sexton, Giacomo Cavalli. Polycomb: a paradigm for genome organization from one to three dimensions. Current Opinion in Cell Biology, 2012, 24 (3), pp.405-414. ⟨10.1016/j.ceb.2012.01.008⟩. ⟨hal-00723100⟩
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Benjamin Descours, Alexandra Cribier, Christine Chable-Bessia, Diana Ayinde, Gillian Rice, et al.. SAMHD1 restricts HIV-1 reverse transcription in quiescent CD4+ T-cells.. Retrovirology, 2012, 9 (1), pp.87. ⟨10.1186/1742-4690-9-87⟩. ⟨pasteur-00750469⟩
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François Ehrenmann, Mp Lefranc. IMGT/DomainGapAlign: the IMGT® tool for the analysis of IG, TR, MH, IgSF, and MhSF domain amino acid polymorphism. Methods in Molecular Biology, 2012, 882, pp.605-633. ⟨10.1007/978-1-61779-842-9_33⟩. ⟨hal-00722914⟩
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Mm Estafania, Olivier Ganier, P. Hernandez, Jb Schvartzmann, M. Mechali, et al.. DNA replication fading as proliferating cells advance in their commitment to terminal differentiation. Scientific Reports, 2012, 2, pp.279. ⟨10.1038/srep00279⟩. ⟨hal-00675653⟩
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Somayyeh Fahiminiya, S. Roche, Nadine Gérard. Improvement of 2D-PAGE resolution of human, porcine and canine follicular fluid: comparison of two immunodepletion columns. Reproduction in Domestic Animals, 2012, 47 (5), pp.e67-e70. ⟨10.1111/j.1439-0531.2011.01939.x⟩. ⟨hal-01129661⟩
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G Faivre, Gwenaëlle Collod-Béroud, A Adès, A Arbustini, C Child, et al.. The new Ghent criteria for Marfan syndrome: what do they change?. Clinical Genetics, 2012, 81 (5), pp.433 - 442. ⟨10.1111/j.1399-0004.2011.01703.x⟩. ⟨hal-01670114⟩
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P. Flachs, O. Mihola, P. Simecek, S. Gregorova, Jc Schimenti, et al.. Interallelic and intergenic incompatibilities of the prdm9 (hst1) gene in mouse hybrid sterility. PLoS Genetics, 2012, 8 (11), pp.e1003044. ⟨10.1371/journal.pgen.1003044⟩. ⟨hal-00750255⟩
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S. Giest, A. Mcwhinnie, Mp Lefranc, Am Little, S. Grace, et al.. Cytomegalovirus-specific CD8+ T cells targeting different peptide/HLA combinations demonstrate varying T-cell receptor diversity. Immunology, 2012, 135 (1), pp.27-39. ⟨10.1111/j.1365-2567.2011.03508.x⟩. ⟨hal-00701035⟩
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Véronique Giudicelli, Marie-Paule Lefranc. IMGT-ONTOLOGY 2012. Frontiers in Genetics, 2012, 3, pp.79. ⟨10.3389/fgene.2012.00079⟩. ⟨hal-00723101⟩
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T. Grentzinger, C. Armenise, C. Brun, B. Mugat, V. Serrano, et al.. piRNA mediated transgenerational inheritance of an acquired trait. Genome Research, 2012, 22 (10), pp.1877-1888. ⟨10.1101/gr.136614.111⟩. ⟨hal-00738022⟩
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F. Guerfali, R. M. Sghaier, D. Laouini, L. Guizani-Tabbane, F. Ottones, et al.. Differentially expressed Leishmania major genes might discriminate between clinical isolates of contrasted virulence. International Journal of Infectious Diseases, 2012, 16 (1), pp.E160-E161. ⟨10.1016/j.ijid.2012.05.693⟩. ⟨hal-01358539⟩
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Wurtele H, Schalck Kaiser G, Bacal J, St Hilaire E, Lee Eh, et al.. Histone H3 lysine 56 acetylation and the response to DNA replication fork damage. Molecular and Cellular Biology, 2012, 32 (1), pp.154-172. ⟨10.1128/MCB.05415-11⟩. ⟨hal-00668761⟩
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Véronique Humbertclaude, Dalil Hamroun, Kamel Bezzou, Carole Bérard, Odile Boespflug-Tanguy, et al.. Motor and respiratory heterogeneity in Duchenne patients: Implication for clinical trials. European Journal of Paediatric Neurology, 2012, 16 (2), pp.149 - 160. ⟨10.1016/j.ejpn.2011.07.001⟩. ⟨hal-01681808⟩
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Guillaume Jondeau, Delphine Detaint, Florence Tubach, Florence Arnoult, Olivier Milleron, et al.. Aortic Event Rate in the Marfan Population: A Cohort Study. Circulation, 2012, 125 (2), pp.226 - 232. ⟨10.1161/CIRCULATIONAHA.111.054676⟩. ⟨hal-01681811⟩
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Nadine Laguette, N. Rahm, B. Sobhian, C. Chable-Bessia, J. Munch, et al.. Evolutionary and Functional Analyses of the Interaction between the Myeloid Restriction Factor SAMHD1 and the Lentiviral Vpx Protein. Cell Host and Microbe, 2012, 11 (2), pp.205-217. ⟨10.1016/j.chom.2012.01.007⟩. ⟨hal-00675656⟩
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Nadine Laguette, Monsef Benkirane. How Samhd1 changes our view of viral restriction. Trends in Immunology, 2012, 33 (1), pp.26-33. ⟨10.1016/j.it.2011.11.002⟩. ⟨hal-00668757⟩
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H. Lahouassa, W. Daddacha, H. Hofmann, D. Ayinde, E. C. Logue, et al.. SAMHD1 restricts the replication of human immunodeficiency virus type 1 by depleting the intracellular pool of deoxynucleoside triphosphates. Nature Immunology, 2012, 13 (3), pp.223-8. doi: 10.1038/ni.2236. ⟨10.1038/ni.2236⟩. ⟨hal-00675672⟩
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Erica Lana, André Mégarbané, Hélène Tourrière, Pierre Sarda, Gérard Lefranc, et al.. DNA replication is altered in Immunodeficiency Centromeric instability Facial anomalies (ICF) cells carrying DNMT3B mutations. European Journal of Human Genetics, 2012, 20 (10), pp.1044-1050. ⟨10.1038/ejhg.2012.41⟩. ⟨hal-02444088⟩
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Mp Lefranc, G. Lefranc. Human Gm, Km, and Am allotypes and their molecular characterization: a remarkable demonstration of polymorphism. Methods in Molecular Biology, 2012, 882, pp.635-680. ⟨10.1007/978-1-61779-842-9_34⟩. ⟨hal-00723103⟩
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Yea-Lih Lin, P. Pasero. Interference between DNA replication and transcription as a cause of genomic instability. Current Genomics, 2012, 13 (1), pp.65-73. ⟨10.2174/138920212799034767⟩. ⟨hal-00733287⟩
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M. Lutzmann, C. Grey, S. Traver, O. Ganier, A. Maya-Mendoza, et al.. MCM8- and MCM9-Deficient Mice Reveal Gametogenesis Defects and Genome Instability Due to Impaired Homologous Recombination. Molecular Cell, 2012, 47 (4), pp.523-534. ⟨10.1016/j.molcel.2012.05.048⟩. ⟨hal-00733290⟩
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Chandesris M.O., A. Azarine, Ong K.T., S. Taleb, P. Boutouyrie, et al.. Frequent and widespread vascular abnormalities in human signal transducer and activator of transcription 3 deficiency.. Circulation, 2012, 5, pp.25-34. ⟨10.1161/CIRCGENETICS.111.961235⟩. ⟨hal-00672129⟩
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Hélène Martin-Yken, Virginie Ribaud, Jérôme Poli, Coralie Hoareau-Aveilla, Maya Spichal, et al.. 10th Francophone Yeast Meeting 'Levures, Modèles & Outils'. Research in Microbiology, 2012, 163 (5), pp.309-315. ⟨10.1016/j.resmic.2012.05.007⟩. ⟨hal-01201736⟩
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M. Mechali. Methods in DNA replication. Methods, 2012, 57 (2), pp.139. ⟨10.1016/j.ymeth.2012.08.007⟩. ⟨hal-00733292⟩
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M. Nakamura, P. Basavarajaiah, E. Rousset, C. Beraud, D. Latreille, et al.. Spt6 levels are modulated by PAAF1 and proteasome to regulate the HIV-1 LTR. Retrovirology, 2012, 9 (1), pp.13. ⟨10.1186/1742-4690-9-13⟩. ⟨hal-00675676⟩
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Armand Perret-Liaudet, Mathieu Pelpel, Yannick Tholance, Benoit Dumont, Hugo Vanderstichele, et al.. Cerebrospinal fluid collection tubes: a critical issue for Alzheimer disease diagnosis.. Clinical Chemistry, 2012, 58 (4), pp.787-9. ⟨10.1373/clinchem.2011.178368⟩. ⟨hal-00965203⟩
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J. Poli, O. Tsaponina, Laure Crabbé, A. Keszthelyi, V. Pantesco, et al.. dNTP pools determine fork progression and origin usage under replication stress. EMBO Journal, 2012, 31 (4), pp.883-894 : doi: 10.1038/emboj.2011.470. ⟨10.1038/emboj.2011.470⟩. ⟨hal-00677221⟩
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A. Popkova, R. Bernardoni, C. Diebold, V. van de Bor, B. Schuettengruber, et al.. Polycomb controls gliogenesis by regulating the transient expression of the gcm/glide fate determinant. PLoS Genetics, 2012, 8 (12), pp.e1003159. ⟨10.1371/journal.pgen.1003159⟩. ⟨hal-00773681⟩
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P. Portales, Kc Psomas, E. Tuaillon, T. Mura, Jp Vendrell, et al.. The intensity of immune activation is linked to the level of CCR5 expression in human immunodeficiency virus type 1-infected persons. Immunology, 2012, 137 (1), pp.89-97. ⟨10.1111/j.1365-2567.2012.03609.x⟩. ⟨hal-00733297⟩
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B. Recolin, D. Maiorano. Implication of RPA32 phosphorylation in S-phase checkpoint signalling at replication forks stalled with aphidicolin in Xenopus egg extracts. Biochemical and Biophysical Research Communications, 2012, 427 (4), pp.785-789. ⟨10.1016/j.bbrc.2012.09.139⟩. ⟨hal-00752250⟩
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Virginie Ribaud, Cyril Ribeyre, Pascal Damay, David Shore. DNA-end capping by the budding yeast transcription factor and subtelomeric binding protein Tbf1. EMBO Journal, 2012, 31 (1), pp.138-149. ⟨10.1038/emboj.2011.349⟩. ⟨hal-02382146⟩
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Ferdinand Roesch, Oussama Meziane, Anna Kula, Sébastien Nisole, Françoise Porrot, et al.. Hyperthermia stimulates HIV-1 replication.. PLoS Pathogens, 2012, 8 (7), pp.e1002792. ⟨10.1371/journal.ppat.1002792⟩. ⟨hal-00723104⟩
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Y. Romero, M. Vuandaba, P. Suarez, C. Grey, P. Calvel, et al.. The Glucocorticoid-Induced Leucine Zipper (GILZ) Is Essential for Spermatogonial Survival and Spermatogenesis. Sexual Development, 2012, 6 (4), pp.169-177. ⟨10.1159/000338415⟩. ⟨hal-00733328⟩
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Alireza Samadi, Delphine Detaint, Carine Roy, Florence Arnoult, Gabriel Delorme, et al.. Surgical management of patients with Marfan syndrome: Evolution throughout the years. Archives of cardiovascular diseases, 2012, 105 (2), pp.84 - 90. ⟨10.1016/j.acvd.2012.01.001⟩. ⟨hal-01681809⟩
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Jc Schwartz, Mp Lefranc, Mp Murtaugh. Organization, complexity and allelic diversity of the porcine (Sus scrofa domestica) immunoglobulin lambda locus. Immunogenetics, 2012, 64 (5), pp.399-407. ⟨10.1007/s00251-011-0594-9⟩. ⟨hal-00701048⟩
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Jc Schwartz, Mp Lefranc, Mp Murtaugh. Evolution of the porcine (Sus scrofa domestica) immunoglobulin kappa locus through germline gene conversion. Immunogenetics, 2012, 64 (4), pp.303-311. ⟨10.1007/s00251-011-0589-6⟩. ⟨hal-00701042⟩
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Martine Simonelig. PABPN1 shuts down alternative poly(A) sites. Cell Research, 2012, 22 (10), pp.1419-1421. ⟨10.1038/cr.2012.86⟩. ⟨hal-00738017⟩
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Martine Simonelig. Maternal-to-zygotic transition: soma versus germline.. Genome Biology, 2012, 13 (2), pp.145. ⟨10.1186/gb4001⟩. ⟨hal-00677224⟩
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Sexton T, Yaffe E, Kenigsberg E, Bantignies F, Leblanc B, et al.. Three-Dimensional Folding and Functional Organization Principles of the Drosophila Genome. Cell, 2012, 148 (3), pp.458-472. ⟨10.1016/j.cell.2012.01.010⟩. ⟨hal-00668759⟩
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M. Tittel-Elmer, A. Lengronne, Mb Davidson, J. Bacal, P. François, et al.. Cohesin Association to Replication Sites Depends on Rad50 and Promotes Fork Restart. Molecular Cell, 2012, 48 (1), pp.98-108. ⟨10.1016/j.molcel.2012.07.004⟩. ⟨hal-00742872⟩
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J. Vezilier, A. Nicot, Sylvain Gandon, A. Rivero. Plasmodium infection decreases fecundity and increases survival of mosquitoes. Proceedings of the Royal Society B: Biological Sciences, 2012, 279 (1744), pp.4033-4041. ⟨10.1098/rspb.2012.1394⟩. ⟨hal-02361708⟩
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Alexandre Wagschal, Emilie Rousset, Poornima Basavarajaiah, Xavier Contreras, Alex Harwig, et al.. Microprocessor, Setx, Xrn2, and Rrp6 Co-operate to Induce Premature Termination of Transcription by RNAPII. Cell, 2012, 150 (6), pp.1147 - 1157. ⟨10.1016/j.cell.2012.08.004⟩. ⟨hal-02652531⟩
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David Wallon, Stéphane Rousseau, Anne Rovelet-Lecrux, Muriel Quillard-Muraine, Lucie Guyant-Maréchal, et al.. The French series of autosomal dominant early onset Alzheimer's disease cases: mutation spectrum and cerebrospinal fluid biomarkers.. Journal of Alzheimer's Disease, 2012, 30 (4), pp.847-56. ⟨10.3233/JAD-2012-120172⟩. ⟨hal-00965220⟩
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A. Yatim, C. Benne, B. Sobhian, S. Laurent-Chabalier, O. Deas, et al.. NOTCH1 Nuclear Interactome Reveals Key Regulators of Its Transcriptional Activity and Oncogenic Function. Molecular Cell, 2012, 48 (3), pp.445-458. ⟨10.1016/j.molcel.2012.08.022⟩. ⟨hal-00752255⟩
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Céline Zimmerli, Cécile C. Ribot, Alain Vavasseur, Hubert Bauer, Rainer Hedrich, et al.. $PHO1$ expression in guard cells mediates the stomatal response to abscisic acid in Arabidopsis. The Plant Journal, 2012, 72, pp.199 - 211. ⟨10.1111/j.1365-313X.2012.05058.x⟩. ⟨hal-01759670⟩
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Journal articles

2011

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R. Antonacci, M. Mineccia, Mp Lefranc, Hm Ashmaoui, C. Lanave, et al.. Expression and genomic analyses of Camelus dromedarius T cell receptor delta (TRD) genes reveal a variable domain repertoire enlargement due to CDR3 diversification and somatic mutation.. Molecular Immunology, 2011, 48 (12-13), pp.1384-1396. ⟨10.1016/j.molimm.2011.03.011⟩. ⟨hal-00616404⟩
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Seyed Yahya Anvar, Peter T Hoen, Andrea Venema, Barbara van Der Sluijs, Baziel van Engelen, et al.. Deregulation of the ubiquitin-proteasome system is the predominant molecular pathology in OPMD animal models and patients.. Skeletal Muscle, 2011, 1 (1), pp.15. ⟨10.1186/2044-5040-1-15⟩. ⟨inserm-00617211⟩
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A. Ayrolles-Torro, T. Imberdis, T. Torrent, K. Toupet, Iv Baskakov, et al.. Oligomeric-Induced Activity by Thienyl Pyrimidine Compounds Traps Prion Infectivity.. Journal of Neuroscience, 2011, 31 (42), pp.14882-14892. ⟨10.1523/JNEUROSCI.0547-11.2011⟩. ⟨hal-00635922⟩
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Schuettengruber B, Martinez Am, Iovino N, Cavalli G. Trithorax group proteins: switching genes on and keeping them active. Nature Reviews Molecular Cell Biology, 2011, 12 (12), pp.799-814. doi: 10.1038/nrm3230. ⟨10.1038/nrm3230⟩. ⟨hal-00645714⟩
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Frederic Bantignies, Virginie Roure, Itys Comet, Benjamin Leblanc, Bernd Schuettengruber, et al.. Polycomb-dependent Regulatory Contacts between Distant Hox Loci in Drosophila. Cell, 2011, 144 (2), pp.214-226. ⟨10.1016/j.cell.2010.12.026⟩. ⟨hal-00575083⟩
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Frederic Bantignies, Giacomo Cavalli. Polycomb group proteins: repression in 3D. Trends in Genetics, 2011, 27 (11), pp.454-464. ⟨10.1016/j.tig.2011.06.008⟩. ⟨hal-00635925⟩
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N. Barbezier, A. Chartier, Y. Bidet, A. Buttstedt, C. Voisset, et al.. Antiprion drugs 6-aminophenanthridine and guanabenz reduce PABPN1 toxicity and aggregation in oculopharyngeal muscular dystrophy.. EMBO Molecular Medicine, 2011, 3 (1), pp.35-49. ⟨10.1002/emmm.201000109⟩. ⟨hal-00575087⟩
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Yamina Bennasser, Christine Chable-Bessia, Robinson Triboulet, Derrick Gibbings, Carole Gwizdek, et al.. Competition for XPO5 binding between Dicer mRNA, pre-miRNA and viral RNA regulates human Dicer levels. Nature Structural and Molecular Biology, 2011, 18 (3), pp.323-327. ⟨10.1038/nsmb.1987⟩. ⟨hal-00575094⟩
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Marion Berenguer, Jinzhong Zhang, M Christine Bruce, Laurène Martinez, Teresa Gonzalez, et al.. Dimethyl sulfoxide enhances GLUT4 translocation through a reduction in GLUT4 endocytosis in insulin-stimulated 3T3-L1 adipocytes.. Biochimie, 2011, 93 (4), pp.697-709. ⟨10.1016/j.biochi.2010.12.013⟩. ⟨hal-01478348⟩
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Arnaud Blanchard, Vuthy Ea, Agathe Roubertie, Mélanie Martin, Coline Coquart, et al.. DYT6 dystonia: Review of the literature and creation of the UMD locus-specific database (LSDB) for mutations in the THAP1 gene. Human Mutation, 2011, 32 (11), pp.1213 - 1224. ⟨10.1002/humu.21564⟩. ⟨hal-01670069⟩
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A. Boulanger, Christelle Clouet-Redt, M. Farge, T. Guignard, C. Fernando, et al.. ftz-f1 and Hr39 opposing roles on EcR expression during Drosophila mushroom body neuron remodeling. Nature Neuroscience, 2011, 14 (1), pp.37-44. ⟨10.1038/nn.2700⟩. ⟨hal-00575097⟩
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Maria Braoudaki, Katerina Katsibardi, Véronique Giudicelli, Kalliopi Karamolegou, Ch Papathanassiou, et al.. Analysis of somatic hypermutations of immunoglobulin gene rearrangements in childhood acute lymphoblastic leukemia. Cancer Investigation, 2011, 29 (5), pp.360-364. ⟨10.3109/07357907.2011.584587⟩. ⟨hal-00616407⟩
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N. Brieu, P. Portales, Mj Carles, P. Corbeau. Interleukin-7 induces HIV type 1 R5-to-X4 switch. Blood, 2011, 117 (6), pp.2073-2074. ⟨10.1182/blood-2010-10-311860⟩. ⟨hal-00575102⟩
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Marie-Elisabeth Brun, Erica Lana, Isabelle Rivals, Gérard Lefranc, Pierre Sarda, et al.. Heterochromatic Genes Undergo Epigenetic Changes and Escape Silencing in Immunodeficiency. PLoS ONE, 2011, 6 (4), pp.e19464. ⟨10.1371/journal.pone.0019464⟩. ⟨hal-02444142⟩
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Papin C, Simonelig M. Embryonic development is controlled by small non-coding RNAs derived from transposable elements. Médecine/Sciences, 2011, 27 (12), pp.1050-1052. ⟨10.1051/medsci/20112712004⟩. ⟨hal-00668740⟩
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Giacomo Cavalli. From linear genes to Epigenetic inheritance of three dimensional Epigenomes.. Journal of Molecular Biology, 2011, 409 (1), pp.54-61. ⟨10.1016/j.jmb.2011.03.001⟩. ⟨hal-00615518⟩
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Christelle Cayrou, Philippe Coulombe, Alice Vigneron, Slavica Stanojcic, Olivier Ganier, et al.. Genome-Scale Analysis of Metazoan Replication Origins Reveals their Organization in Specific but Flexible Sites Defined by Conserved Features. Genome Research, 2011, 21 (9), pp.1438-1449. ⟨10.1101/gr.121830.111⟩. ⟨lirmm-00631491⟩
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Yong Chen, Rekha Rai, Zi-Ren Zhou, Junko Kanoh, Cyril Ribeyre, et al.. A conserved motif within RAP1 has diversified roles in telomere protection and regulation in different organisms. Nature Structural and Molecular Biology, 2011, 18 (2), pp.213-221. ⟨10.1038/nsmb.1974⟩. ⟨hal-02382140⟩
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T. Cheutin, Frederic Bantignies, B. Leblanc, Giacomo Cavalli. Chromatin folding : from linear chromosomes to the 4D nucleus. Cold Spring Harbor Symposia on Quantitative Biology, 2011, 75, pp.461-473. ⟨10.1101/sqb.2010.75.029⟩. ⟨hal-00615521⟩
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I. Comet, B. Schuttengruber, T. Sexton, Giacomo Cavalli. A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber.. Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (6), pp.2294-2299. ⟨10.1073/pnas.1002059108⟩. ⟨hal-00575106⟩
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P. Corbeau, J. Reynes. Immune reconstitution under antiretroviral therapy: a new challenge in HIV-1 infection. Blood, 2011, 117 (21), pp.5582-5590. ⟨10.1182/blood-2010-12-322453⟩. ⟨hal-00615522⟩
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C. Crozet, A. Antoni-Zdziobek, S. Lay, S. Coindeau. Influence of copper additions in Fe-10Ni (mass.%) alloys on cooling microstructures. Solid State Phenomena, 2011, 172-174, pp.505-510. ⟨10.4028/www.scientific.net/SSP.172-174.505⟩. ⟨hal-00692268⟩
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Emmanuelle d'Alençon, Nicolas Nègre, Slavica Stanojcic, Benjamin Alassoeur, Sylvie Gimenez, et al.. Characterization of a CENP-B homolog in the holocentric Lepidoptera Spodoptera frugiperda. Gene, 2011, 485 (2), pp.91-101. ⟨10.1016/j.gene.2011.06.007⟩. ⟨hal-02647712⟩
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I. de Vidi, G. Boursier, N. Delouche, P. Portales, E. Cadars, et al.. Strategy for anti-aquaporin-4 auto-antibody identification and quantification using a new cell-based assay. Clinical Immunology, 2011, 138 (3), pp.239-246. ⟨10.1016/j.clim.2010.11.012⟩. ⟨hal-00575112⟩
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K. Delmouly, M. Belondrade, D. Casanova, Ollivier Milhavet, S. Lehmann. HEPES inhibits the conversion of the Prion protein in cell culture. Journal of General Virology, 2011, 92 (Pt 5), pp.1244-1250. ⟨10.1099/vir.0.027334-0⟩. ⟨hal-00615524⟩
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L. Didierlaurent, Pierre-Jean Racine, L. Houzet, C. Chamontin, B. Berkhout, et al.. Role of HIV-1 RNA and protein determinants for the selective packaging of spliced and unspliced viral RNA and host U6 and 7SL RNA in virus particles. Nucleic Acids Research, 2011, 39 (20), pp.8915 - 8927. ⟨10.1093/nar/gkr577⟩. ⟨hal-01923818⟩
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A. Dievart, N. Gilbert, G. Droc, A. Attard, M. Gourgues, et al.. Leucine-Rich Repeat Receptor Kinases are sporadically distributed in eukaryotic genomes. BMC Evolutionary Biology, 2011, 11, pp.367. ⟨10.1186/1471-2148-11-367⟩. ⟨hal-00677198⟩
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Hélène Dumond, Imane Al-Asaad, Amand Chesnel, Dominique Chardard, Brigitte Boizet-Bonhoure, et al.. Temporal and spatial SOX9 expression patterns in the course of gonad development of the caudate amphibian Pleurodeles waltl. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, 2011, 316B (3), pp.199-211. ⟨10.1002/jez.b.21390⟩. ⟨hal-00747818⟩
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François Ehrenmann, Mp Lefranc. IMGT/DomainGapAlign: IMGT Standardized Analysis of Amino Acid Sequences of Variable, Constant, and Groove Domains (IG, TR, MH, IgSF, MhSF).. Cold Spring Harbor protocols, 2011, 6, pii: pdb.prot5636. doi: 10.1101/pdb.prot5636. ⟨10.1101/pdb.prot5636⟩. ⟨hal-00616462⟩
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François Ehrenmann, Mp Lefranc. IMGT/3Dstructure-DB: Querying the IMGT Database for 3D Structures in Immunology and Immunoinformatics (IG or Antibodies, TR, MH, RPI, and FPIA). Cold Spring Harbor protocols, 2011, 6, pii: pdb.prot5637. doi: 10.1101/pdb.prot5637. ⟨10.1101/pdb.prot5637⟩. ⟨hal-00616465⟩
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François Ehrenmann, Véronique Giudicelli, Patrice Duroux, Marie-Paule Lefranc. IMGT/Collier de Perles: IMGT Standardized Representation f Domains (IG, TR, and IgSF Variable and Constant Domains, MH and MhSF Groove Domains). Cold Spring Harbor protocols, 2011, 6, pp.726-736. ⟨10.1101/pdb.prot5635⟩. ⟨hal-00616472⟩
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Marion Escobar, Pierre Nicolas, Fatiha Sangar, Sabine Laurent-Chabalier, Philippe Clair, et al.. Intestinal epithelial stem cells do not protect their genome by asymmetric chromosome segregation. Nature Communications, 2011, 2 (1), pp.1-9. ⟨10.1038/ncomms1260⟩. ⟨hal-02459471⟩
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Baudat F, Buard J, Corinne Grey, de Massy B. What determines the localisation of spots of meiotic recombination?. Médecine/Sciences, 2011, 27 (12), pp.1053-1055. ⟨10.1051/medsci/20112712005⟩. ⟨hal-00668732⟩
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Somayyeh Fahiminiya, Valérie Labas, S. Roche, Jean-Louis Dacheux, Nadine Gérard. Proteomic analysis of mare follicular fluid during late follicle development. Proteome Science, 2011, 9:54, pp.1-19. ⟨10.1186/1477-5956-9-54⟩. ⟨hal-01129526⟩
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A. Farhat, P. Philibert, C. Sultan, F. Poulat, B. Boizet-Bonhoure. Hematopoietic-Prostaglandin D2 synthase through PGD2 production is involved in the adult ovarian physiology. Journal of Ovarian Research, 2011, 4, pp.3. ⟨10.1186/1757-2215-4-3⟩. ⟨hal-00575114⟩
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Audrey Gabelle, S. Roche, C. Geny, K. Bennys, Pierre Labauge, et al.. Decreased sAβPPβ, Aβ38, and Aβ40 Cerebrospinal Fluid Levels in Frontotemporal Dementia.. Journal of Alzheimer's Disease, 2011, 26 (3), pp.553-563. ⟨10.3233/JAD-2011-110515⟩. ⟨hal-00635931⟩
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Olivier Ganier, Stéphane S. Bocquet, Isabelle I. Peiffer, Vincent V. Brochard, Philippe P. Arnaud, et al.. Synergic reprogramming of mammalian cells by combined exposure to mitotic Xenopus egg extracts and transcription factors. Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (42), pp.17331-17336. ⟨10.1073/pnas.1100733108⟩. ⟨hal-01000287⟩
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Véronique Giudicelli, Marie-Paule Lefranc. IMGT/JunctionAnalysis: IMGT Standardized Analysis of the V-J and V-D-J Junctions of the Rearranged Immunoglobulins (IG) and T Cell Receptors (TR).. Cold Spring Harbor protocols, 2011, 6, pii: pdb.prot5634. doi: 10.1101/pdb.prot5634. ⟨10.1101/pdb.prot5634⟩. ⟨hal-00616484⟩
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Véronique Giudicelli, Xavier Brochet, Marie-Paule Lefranc. IMGT/V-QUEST: IMGT Standardized Analysis of the Immunoglobulin (IG) and T Cell Receptor (TR) Nucleotide Sequences. Cold Spring Harbor protocols, 2011, 6, pii: pdb.prot5633. doi: 10.1101/pdb.prot5633. ⟨10.1101/pdb.prot5633⟩. ⟨hal-00616475⟩
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Céline Gongora, Nadia Vezzio-Vie, Sandie Tuduri, Vincent Denis, Annick Causse, et al.. New Topoisomerase I mutations are associated with resistance to camptothecin.. Molecular Cancer, 2011, 10 (1), pp.64. ⟨10.1186/1476-4598-10-64⟩. ⟨inserm-00602236⟩
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C. Grey, V. Sommermeyer, Valérie Borde, Bernard de Massy. What defines the genetic map? The specification of meiotic recombination sites.. Médecine/Sciences, 2011, 27 (1), pp.63-69. ⟨10.1051/medsci/201127163⟩. ⟨hal-00575120⟩
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Corinne Grey, Barthes P, Chauveau-Le Friec G, Langa F, Baudat F, et al.. Mouse PRDM9 DNA-Binding Specificity Determines Sites of Histone H3 Lysine 4 Trimethylation for Initiation of Meiotic Recombination. PLoS Biology, 2011, 9 (10), pp.e1001176. ⟨10.1371/journal.pbio.1001176⟩. ⟨hal-00645698⟩
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L. Guglielmi, S. Gimenez, M. Larroque, X. Tong, P. Portalès, et al.. Circulating human CD4+ T cells have intracellular pools of CCR5 molecules. Blood, 2011, 118 (4), pp.1177-1178. ⟨10.1182/blood-2011-03-339754⟩. ⟨hal-00635939⟩
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N. He, Ck Chan, B. Sobhian, S. Chou, Y. Xue, et al.. Human Polymerase-Associated Factor complex (PAFc) connects the Super Elongation Complex (SEC) to RNA polymerase II on chromatin. Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (36), pp.e636-645. ⟨10.1073/pnas.1107107108⟩. ⟨hal-00635942⟩
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L. Heron-Milhavet, N. Khouya, Arnaud Fernandez, Nj Lamb. Akt1 and Akt2: Differentiating the aktion. Histology and Histopathology, 2011, 26 (5), pp.651-662. ⟨10.14670/HH-26.651⟩. ⟨hal-00635946⟩
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M. Hetzer, Giacomo Cavalli. Eukaryotic cells - Editorial Review. Current Opinion in Cell Biology, 2011, 23 (3), pp.25-257. ⟨10.1016/j.ceb.2011.04.013⟩. ⟨hal-00616446⟩
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Candela Iglesias, Mathieu Ringeard, Francesca Di Nunzio, Juliette Fernandez, Raphael Gaudin, et al.. Residual HIV-1 DNA Flap-independent nuclear import of cPPT/CTS double mutant viruses does not support spreading infection. Retrovirology, 2011, 8 (1), pp.92. ⟨10.1186/1742-4690-8-92⟩. ⟨pasteur-00646599⟩
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N. Iovino, Giacomo Cavalli. Rolling ES Cells Down the Waddington Landscape with Oct4 and Sox2.. Cell, 2011, 145 (6), pp.815-817. ⟨10.1016/j.cell.2011.05.027⟩. ⟨hal-00616447⟩
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C Kalfa, C Cassorla, F. Audran, I. Oulad Abdennabi, P. Philibert, et al.. Polymorphisms of MAMLD1 gene in hypospadias. Journal of Pediatric Urology, 2011, 7 (6), pp.585 - 591. ⟨10.1016/j.jpurol.2011.09.005⟩. ⟨hal-01681816⟩
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Efterpi Kostareli, Maria Gounari, Agnieszka Janus, Fiona Murray, Xavier Brochet, et al.. Antigen receptor stereotypy across B-cell lymphoproliferations: the case of IGHV4-59/IGKV3-20 receptors with rheumatoid factor activity. Leukemia, 2011, 26 (5), pp.1127-1131. ⟨10.1038/leu.2011.311⟩. ⟨hal-00701065⟩
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Lapasset L, Ollivier Milhavet, A. Prieur, Emilie Besnard, A. Babled, et al.. Rejuvenating senescent and centenarian human cells by reprogramming through the pluripotent state. Genes and Development, 2011, 25 (21), pp.2248-2253. ⟨10.1101/gad.173922.111⟩. ⟨hal-04511150⟩
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Lapasset L, Ollivier Milhavet, A. Prieur, Emilie Besnard, A. Babled, et al.. Rejuvenating senescent and centenarian human cells by reprogramming through the pluripotent state. Genes and Development, 2011, 25 (21), pp.2248-2253. ⟨10.1101/gad.173922.111⟩. ⟨hal-00645710⟩
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Nadine Laguette, Bijan Sobhian, Nicoletta Casartelli, Mathieu Ringeard, Christine Chable-Bessia, et al.. SAMHD1 is the dendritic- and myeloid-cell-specific HIV-1 restriction factor counteracted by Vpx. Nature, 2011, 474 (7353), pp.654-7. ⟨10.1038/nature10117⟩. ⟨hal-00616451⟩
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Dalila Laoudj-Chenivesse, René Bennes, Emmanuel Tronel-Peyroz. FSHD myoblasts fail to downregulate intermediate filament protein vimentin during myogenic differentiation. Biopolymers and Cell, 2011, 225 (4), pp.541-543. ⟨10.1016/S0022-5193(03)00257-1⟩. ⟨hal-03821081⟩
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Mp Lefranc. IMGT Collier de Perles for the Variable (V), Constant (C), and Groove (G) Domains of IG, TR, MH, IgSF, and MhSF. Cold Spring Harbor protocols, 2011, 6, pii: pdb.ip86. doi: 10.1101/pdb.ip86. ⟨10.1101/pdb.ip86⟩. ⟨hal-00616560⟩
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Mp Lefranc. From IMGT-ONTOLOGY IDENTIFICATION Axiom to IMGT Standardized Keywords: For Immunoglobulins (IG), T Cell Receptors (TR), and Conventional Genes.. Cold Spring Harbor protocols, 2011, 6, pii: pdb.ip82. doi: 10.1101/pdb.ip82. ⟨10.1101/pdb.ip82⟩. ⟨hal-00616485⟩
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Mp Lefranc. Antibody nomenclature: From IMGT-ONTOLOGY to INN definition.. mAbs, 2011, 3, pp.1. ⟨10.4161/mabs.3.1.14151⟩. ⟨hal-00575123⟩
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Mp Lefranc. IMGT Unique Numbering for the Variable (V), Constant (C), and Groove (G) Domains of IG, TR, MH, IgSF, and MhSF. Cold Spring Harbor protocols, 2011, 6, pii: pdb.ip85. doi: 10.1101/pdb.ip85. ⟨10.1101/pdb.ip85⟩. ⟨hal-00616559⟩
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Mp Lefranc. From IMGT-ONTOLOGY DESCRIPTION Axiom to IMGT Standardized Labels: For Immunoglobulin (IG) and T Cell Receptor (TR) Sequences and Structures.. Cold Spring Harbor protocols, 2011, 6, pii: pdb.ip83. doi: 10.1101/pdb.ip83. ⟨10.1101/pdb.ip83⟩. ⟨hal-00616486⟩
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Mp Lefranc. From IMGT-ONTOLOGY CLASSIFICATION Axiom to IMGT Standardized Gene and Allele Nomenclature: For Immunoglobulins (IG) and T Cell Receptors (TR). Cold Spring Harbor protocols, 2011, 6, pii: pdb.ip84. doi: 10.1101/pdb.ip84. ⟨10.1101/pdb.ip84⟩. ⟨hal-00616556⟩
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Mp Lefranc. IMGT, the International ImMunoGeneTics Information System.. Cold Spring Harbor protocols, 2011, 6, pii: pdb.top115. doi: 10.1101/pdb.top115. ⟨10.1101/pdb.top115⟩. ⟨hal-00616561⟩
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Marc Levivier, Danielle Casanova, François Perea, Ingrid Ceria. Se dire avec le déni : paroles alcooliques. Le Courrier des addictions, 2011, 1, pp. ⟨hal-01093259⟩
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M. Lichten, Bernard de Massy. The impressionistic landscape of meiotic recombination. Cell, 2011, 147 (2), pp.267-270. ⟨10.1016/j.cell.2011.09.038⟩. ⟨hal-00635951⟩
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Daria Mamaeva, Chantal Ripoll, Claire Bony, Marisa Teigell, Florence Perrin, et al.. Isolation of mineralizing Nestin+ Nkx6.1+ vascular muscular cells from the adult human spinal cord. BMC Neuroscience, 2011, 12 (1), pp.99. ⟨10.1186/1471-2202-12-99⟩. ⟨inserm-00637318⟩
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B. Moniot, A. Farhat, K. Aritake, F. Declosmenil, S. Nef, et al.. Hematopoietic prostaglandin D synthase (H-Pgds) is expressed in the early embryonic gonad and participates to the initial nuclear translocation of the SOX9 protein. Developmental Dynamics, 2011, 240 (10), pp.2335-2343. doi: 10.1002/dvdy.22726. ⟨10.1002/dvdy.22726⟩. ⟨hal-00635993⟩
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A. Nishiyama, L. Frappier, M. Mechali. MCM-BP regulates unloading of the MCM2-7 helicase in late S phase. Genes and Development, 2011, 25 (2), pp.165-175. ⟨10.1101/gad.614411⟩. ⟨hal-00575121⟩
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Bénédicte Recolin, Siem van Der Laan, Domenico Maiorano. Role of RPA as sensor in activation of the S-phase checkpoint in Xenopus egg extracts. Nucleic Acids Research, 2011, 40 (8), pp.3431-3442. ⟨10.1093/nar/gkr1241⟩. ⟨hal-00668742⟩
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A. Relaño-Ginés, S. Lehmann, A. Bencsik, Me Herva, Jm Torres, et al.. Stem cell therapy extends incubation and survival time in prion-infected mice in a time window-dependant manner. Journal of Infectious Diseases, 2011, 204 (7), pp.1038-1045. ⟨10.1093/infdis/jir484⟩. ⟨hal-00635996⟩
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A. Rivero, A. Magaud, A. Nicot, J. Vezilier. Energetic cost of insecticide resistance in Culex pipiens mosquitoes. Journal of Medical Entomology, 2011, 48 (3), pp.694-700. ⟨10.1603/ME10121⟩. ⟨hal-02361717⟩
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Y. Romero, O. Meikar, Marilena D. Papaioannou, B. Conne, C. Grey, et al.. Dicer1 depletion in male germ cells leads to infertility due to cumulative meiotic and spermiogenic defects. PLoS ONE, 2011, 6 (10), pp.E25241. ⟨10.1371/journal.pone.0025241⟩. ⟨hal-00636003⟩
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Lehmann S. CSF proteins: useful markers in Alzheimer's diseases. Revue du Praticien (La), 2011, 61 (7), pp.928. ⟨hal-00645712⟩
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Trannoy S, Redt-Clouet C, Dura Jm, Preat T. Parallel processing of appetitive short- and long-term memories in Drosophila. Current Biology, 2011, 21 (19), pp.1647-1653. ⟨10.1016/j.cub.2011.08.032⟩. ⟨hal-00645727⟩
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Ming-Yi Shen, Yan-Jun Liu, Ming-Jaw Don, Hsien-Yueh Liu, Zeng-Weng Chen, et al.. Combined Phytochemistry and Chemotaxis Assays for Identification and Mechanistic Analysis of Anti-Inflammatory Phytochemicals in Fallopia japonica. PLoS ONE, 2011, 6 (11), pp.e27480. ⟨10.1371/journal.pone.0027480⟩. ⟨hal-00645719⟩
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H. Sim, A. Argentaro, Dp Czech, S. Bagheri-Fam, Ah Sinclair, et al.. Inhibition of SRY-Calmodulin Complex Formation Induces Ectopic Expression of Ovarian Cell Markers in Developing XY Gonads. Endocrinology, 2011, 152 (7), pp.2883-2893. ⟨10.1210/en.2010-1475⟩. ⟨hal-00616458⟩
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M. Simonelig. Developmental functions of piRNAs and transposable elements: A Drosophila point-of-view. RNA Biology, 2011, 8, pp.5. ⟨10.4161/rna.8.5.16042⟩. ⟨hal-00616483⟩
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E. Villard, C. Perret, F. Gary, Cyril Proust, C. Dilanian, et al.. A genome-wide association study identifies two loci associated with heart failure due to dilated cardiomyopathy. European Heart Journal, 2011, 32, pp.1065-1076. ⟨10.1093/eurheartj/ehr105⟩. ⟨hal-00616568⟩
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Journal articles

2010

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Lj Abu-Raddad, N. Hilmi, G. Mumtaz, M. Benkirane, Fa. Akala, et al.. Epidemiology of HIV infection in the Middle East and North Africa. AIDS. Official journal of the international AIDS Society, 2010, 24 (Suppl 2), pp.S5-23. ⟨10.1097/01.aids.0000386729.56683.33⟩. ⟨hal-00508832⟩
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Corinne Bareil, Corinne Thèze, Christophe Béroud, Dalil Hamroun, Caroline Guittard, et al.. UMD-CFTR: A database dedicated to CF and CFTR-related disorders. Human Mutation, 2010, 31 (9), pp.1011 - 1019. ⟨10.1002/humu.21316⟩. ⟨hal-01681834⟩
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Frédéric Baudat, J. Buard, C. Grey, A. Fledel-Alon, C. Ober, et al.. PRDM9 is a Major Determinant of Meiotic Recombination Hotspots in Humans and Mice. Science, 2010, 327 (5967), pp.836-840. ⟨10.1126/science.1183439⟩. ⟨hal-00459048⟩
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Frédéric Baudat, J. Buard, C. Grey, Bernard de Massy. Prdm9, a key control of mammalian recombination hotspots. Médecine/Sciences, 2010, 26 (5), pp.468-470. ⟨10.1051/medsci/2010265468⟩. ⟨hal-00493845⟩
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Monsef Benkirane, Claude Sardet, O. Coux. Lessons from interconnected ubiquitylation and acetylation of p53: think metastable networks. Biochemical Society Transactions, 2010, 38 (Pt 1), pp.98-103. ⟨10.1042/BST0380098⟩. ⟨hal-00450665⟩
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M. Bermúdez-López, A. Ceschia, G. de Piccoli, N. Colomina, P. Pasero, et al.. The Smc5/6 complex is required for dissolution of DNA-mediated sister chromatid linkages. Nucleic Acids Research, 2010, 38 (19), pp.6502-6512. ⟨10.1093/nar/gkq546⟩. ⟨hal-00575057⟩
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Arnaud Blanchard, A. Roubertie, M. y Frédéric, M. Claustres, Gwenaëlle Collod-Béroud. Dystonies monogéniques : l’hypothèse dopaminergique revisitée. Revue Neurologique, 2010, 166 (4), pp.389-399. ⟨10.1016/j.neurol.2009.09.007⟩. ⟨hal-01669962⟩
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Guillaume Bompard, Gabriel Rabeharivelo, Marie Frank, Julien Cau, Claude Delsert, et al.. Subgroup II PAK-mediated phosphorylation regulates Ran activity during mitosis.. Journal of Cell Biology, 2010, 190 (5), pp.807-22. ⟨10.1083/jcb.200912056⟩. ⟨hal-00533751⟩
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Ana Boulanger, Jean-Maurice Dura. ftz-f1 and Hr39 opposing roles on EcR expression during Drosophila mushroom body neuron remodeling. Nature Neuroscience, 2010, ⟨10.1038/nn.2700⟩. ⟨hal-00598184⟩
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C. Cayrou, Philippe Coulombe, Marcel Méchali. Programming DNA replication origins and chromosome organization. Chromosome Research, 2010, 18 (1), pp.137-145. ⟨10.1007/s10577-009-9105-3⟩. ⟨hal-00463198⟩
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E. Chouery, A. Pangrazio, S. Frattini, A. Villa, L. van Wesenbeeck, et al.. A new familial sclerosing bone dysplasia.. Journal of Bone and Mineral Research, 2010, 25 (3), pp.676-680. ⟨10.1359/jbmr.090733⟩. ⟨hal-00484933⟩
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Laura Cif, Xavier Vasques, Victoria Gonzalez, Patrice Ravel, Brigitte Biolsi, et al.. Long-term follow-up of DYT1 dystonia patients treated by deep brain stimulation: An open-label study. Movement Disorders, 2010, 25 (3), pp.289 - 299. ⟨10.1002/mds.22802⟩. ⟨hal-01669958⟩
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M. Cottet, L Albizu, S Perkovska, Frédéric Jean-Alphonse, R Rahmeh, et al.. Past, present and future of vasopressin and oxytocin receptor oligomers, prototypical GPCR models to study dimerization processes. Current Opinion in Pharmacology, 2010, 10 (1), pp.59-66. ⟨10.1016/j.coph.2009.10.003⟩. ⟨hal-03117146⟩
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Laure Crabbé, Aubin Thomas, V. Pantesco, J. de Vos, P. Pasero, et al.. Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response. Nature Structural and Molecular Biology, 2010, 17 (11), pp.1391-1397. ⟨10.1038/nsmb.1932⟩. ⟨hal-00575058⟩
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J. Cretenet, M. Le Clech, F. Gachon. Circadian Clock-coordinated 12 Hr period rhythmic activation of the IRE1 alpha pathway controls lipid metabolism in mouse liver.. Cell Metabolism, 2010, 11 (1), pp.47-57. ⟨10.1016/j.cmet.2009.11.002⟩. ⟨hal-00451964⟩
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Sabri Denden, Ramzi Lakhdar, Nadia Leban, Houria Daimi, Donia El Hayek, et al.. Mise au point: déficit en alpha 1 antitrypsine. Revue Méditerranéenne de Génétique Humaine, 2010, 1, pp.26-33. ⟨hal-00634741⟩
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Delphine Detaint, Laurence Faivre, Gwenaelle Collod-Beroud, Anne Child, Bart L Loeys, et al.. Cardiovascular manifestations in men and women carrying a FBN1 mutation. European Heart Journal, 2010, 31 (18), pp.2223 - 2229. ⟨10.1093/eurheartj/ehq258⟩. ⟨hal-01669994⟩
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A. Doucet, A. Hulme, E. Sahinovic, D. Kulpa, J. Moldovan, et al.. Characterization of LINE-1 Ribonucleoprotein Particles.. PLoS Genetics, 2010, 6 (10), pp.e1001150. ⟨10.1371/journal.pgen.1001150⟩. ⟨hal-00527796⟩
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François Ehrenmann, Q. Kaas, Marie-Paule Lefranc. IMGT/3D Structure-DB and IMGT/DomainGapAlign: a database and a tool for immunoglobulins or antibodies, T cell receptors, MHC, IgSF and MhcSF.. Nucleic Acids Research, 2010, 38 (Suppl 1), pp.D301-D307. ⟨10.1093/nar/gkp946⟩. ⟨hal-00450668⟩
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G. Eot-Houllier, M. Venoux, S. Vidal-Eychenié, Mt Hoang, D. Giorgi, et al.. PLK1 regulates both ASAP localization and its role in spindle pole integrity.. Journal of Biological Chemistry, 2010, 285 (38), pp.29556-29568. ⟨10.1074/jbc.M110.144220⟩. ⟨hal-00527800⟩
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Al Fiser, Yea-Lih Lin, P. Portales, C. Meetling, J. Clot, et al.. Pairwise Comparison of Isogenic HIV-1 Viruses: R5 Phenotype Replicates More Efficiently Than X4 Phenotype in Primary CD4+ T Cells Expressing Physiological Levels of CXCR4.. Journal of Acquired Immune Deficiency Syndromes - JAIDS, 2010, 53 (2), pp.162-166. ⟨10.1097/QAI.0b013e3181c72033⟩. ⟨hal-00451972⟩
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Lg Fradkin, Jm Dura, Jn Noordermeer. Ryks: new partners for Wnts in the developing and regenerating nervous system.. Trends in Neurosciences, 2010, 33 (2), pp.84-92. ⟨10.1016/j.tins.2009.11.005⟩. ⟨hal-00459064⟩
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Céline Franckhauser, Daria Mamaeva, Lisa Heron-Milhavet, Anne Fernandez, Ned J. Lamb. Distinct Pools of cdc25C Are Phosphorylated on Specific TP Sites and Differentially Localized in Human Mitotic Cells. PLoS ONE, 2010, 5 (7), pp.e11798. ⟨10.1371/journal.pone.0011798⟩. ⟨hal-00508833⟩
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Audrey Gabelle, S. Roche, Christian Geny, Karim Bennys, Pierre Labauge, et al.. Correlations between soluble alpha/beta forms of amyloid precursor protein and Abeta38, 40 and 42 in human cerebrospinal fluid. Brain Research, 2010, 1357, pp.175-183. ⟨10.1016/j.brainres.2010.08.022⟩. ⟨hal-00527806⟩
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M. Giannattasio, C. Follonier, H. Tourriere, F. Puddu, F. Lazzaro, et al.. Exo1 competes with repair synthesis, converts NER intermediates to long ssDNA gaps, and promotes checkpoint activation. Molecular Cell, 2010, 40 (1), pp.50-62. ⟨10.1016/j.molcel.2010.09.004⟩. ⟨hal-00527808⟩
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Juliette D Godin, Ghislaine Poizat, Miriam A Hickey, Florence Maschat, Sandrine Humbert. Mutant huntingtin-impaired degradation of beta-catenin causes neurotoxicity in Huntington's disease.. EMBO Journal, 2010, 29 (14), pp.2433-2445. ⟨10.1038/emboj.2010.117⟩. ⟨hal-00508840⟩
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I. Grad, Cr Cederroth, J. Walicki, C. Grey, S. Barluenga, et al.. The Molecular Chaperone Hsp90α Is Required for Meiotic Progression of Spermatocytes beyond Pachytene in the Mouse. PLoS ONE, 2010, 5 (12), pp.e15770. ⟨10.1371/journal.pone.0015770⟩. ⟨hal-00635935⟩
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A. Haj Khelil, S. Denden, N. Leban, H. Daimi, R. Lakhdhar, et al.. Hemoglobinopathies in North Africa: a review.. Hemoglobin, 2010, 34 (1), pp.1-23. ⟨10.3109/03630260903571286⟩. ⟨hal-00456809⟩
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M. Halling-Brown, F. Pappalardo, D. Rapin, P. Zhang, A. Emerson, et al.. ImmunoGrid: towards agent-based simulations of the human immune system at a natural scale.. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 2010, 368 (1920), pp.2799-2815. ⟨10.1098/rsta.2010.0067⟩. ⟨hal-00485586⟩
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Lisa Heron-Milhavet, Daria Mamaeva, Derek Leroith, Ned Lamb, Anne Fernandez. Impaired muscle regeneration and myoblast differentiation in mice with a muscle-specific KO of IGF-IR. Journal of Cellular Physiology, 2010, 225 (1), pp.1-6. ⟨10.1002/jcp.22218⟩. ⟨hal-02402205⟩
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C. Herzig, Marie-Paule Lefranc, C. Baldwin. Annotation and classification of the bovine T cell receptor delta genes. BMC Genomics, 2010, 11 (1), pp.100. ⟨10.1186/1471-2164-11-100⟩. ⟨hal-00456810⟩
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M Humbertclaude, Sylvie Tuffery-Giraud, C. Bareil, C. Thèze, P Paulet, et al.. Banques de données de mutations : enjeux et perspectives pour les maladies génétiques orphelines. Pathologie Biologie, 2010, 58 (5), pp.387 - 395. ⟨10.1016/j.patbio.2009.09.008⟩. ⟨hal-01670004⟩
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N. Kalfa, G. Meduri, P. Philibert, C. Patte, B. Boizet-Bonhoure, et al.. Unusual Virilization in Girls with Juvenile Granulosa Cell Tumors of the Ovary Is Related to Intratumoral Aromatase Deficiency. Hormone Research in Paediatrics, 2010, 74 (2), pp.83-91. ⟨10.1159/000313396⟩. ⟨hal-00508836⟩
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Philippe Khau van Kien, David Baux, Nathalie Pallares-Ruiz, Corinne Baudoin, Aurélie Plancke, et al.. Missense mutations of conserved glycine residues in fibrillin-1 highlight a potential subtype of cb-EGF-like domains. Human Mutation, 2010, 31 (1), pp.E1021 - E1042. ⟨10.1002/humu.21131⟩. ⟨hal-01669921⟩
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R. Kumar, Henri-Marc Bourbon, Bernard de Massy. Functional conservation of Mei4 for meiotic DNA double-strand break formation from yeasts to mice. Genes and Development, 2010, 24 (12), pp.1266-1280. ⟨10.1101/gad.571710⟩. ⟨hal-00493839⟩
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R. Lakhdar, S. Denden, J. Knani, N. Leban, H. Daimi, et al.. Relationship between glutathione S-transferase P1 polymorphisms and chronic obstructive pulmonary disease in a Tunisian population.. Genetics and molecular research : GMR, 2010, 9 (2), pp.897-907. ⟨10.4238/vol9-2gmr770⟩. ⟨hal-00485590⟩
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R. Lakhdar, S. Denden, J. Knani, N. Leban, H. Daimi, et al.. Association of GSTM1 and GSTT1 polymorphisms with chronic obstructive pulmonary disease in a Tunisian population.. Biochemical Genetics, 2010, 48 (7-8), pp.647-657. ⟨10.1007/s10528-010-9346-z⟩. ⟨hal-00509803⟩
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J. Lane, Patrice Duroux, Mp Lefranc. From IMGT-ONTOLOGY to IMGT/LIGMotif: the IMGT(R) standardized approach for immunoglobulin and T cell receptor gene identification and description in large genomic sequences. BMC Bioinformatics, 2010, 11 (1), pp.223. ⟨10.1186/1471-2105-11-223⟩. ⟨hal-00485592⟩
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L. Mahieu-Williame, P. Falgayrettes, L. Nativel, P. Gall-Borrut, L. Costa, et al.. Near-field microscopy and fluorescence spectroscopy: application to chromosomes labelled with different fluorophores. Journal of Microscopy, 2010, 238 (1), pp.36-43. ⟨10.1111/j.1365-2818.2009.03326.x⟩. ⟨hal-01905457⟩
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S. Malki, B. Boizet-Bonhoure, F. Poulat. Shuttling of SOX proteins. International Journal of Biochemistry and Cell Biology, 2010, 42 (3), pp.411-416. ⟨10.1016/j.biocel.2009.09.020⟩. ⟨hal-00463200⟩
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Alain Manrique, Mathieu Bernard, Anne Hitzel, Michael Bubenheim, Christophe Tron, et al.. Diagnostic and prognostic value of myocardial perfusion gated SPECT in orthotopic heart transplant recipients.. Journal of Nuclear Cardiology, 2010, 17 (2), pp.197-206. ⟨10.1007/s12350-009-9166-x⟩. ⟨hal-01144817⟩
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Boubacar Mariko, Zeinab Ghandour, Stephanie Raveaud, Mickael Quentin, Yves Usson, et al.. Microfibrils and fibrillin-1 induce integrin-mediated signaling, proliferation and migration in human endothelial cells.. American Journal of Physiology - Cell Physiology, 2010, 299 (5), pp.C977-87. ⟨10.1152/ajpcell.00377.2009⟩. ⟨hal-00523374⟩
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Am Martinez, Giacomo Cavalli. Uncovering a tumor-suppressor function for Drosophila polycomb group genes.. Cell Cycle, 2010, 9, pp.2. ⟨10.4161/cc.9.2.10518⟩. ⟨hal-00450667⟩
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Laurène Martinez, Marion Berenguer, M. Christine Bruce, Yannick Le Marchand-Brustel, Roland Govers. Rosiglitazone increases cell surface GLUT4 levels in 3T3-L1 adipocytes through an enhancement of endosomal recycling. Biochemical Pharmacology, 2010, 79 (9), pp.1300 - 1309. ⟨10.1016/j.bcp.2009.12.013⟩. ⟨hal-01478364⟩
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M. Mechali. Eukaryotic DNA replication origins: many choices for appropriate answers.. Nature Reviews Molecular Cell Biology, 2010, 11 (10), pp.728-738. ⟨10.1038/nrm2976⟩. ⟨hal-00529311⟩
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R. Meyer, M. Delaage, R. Rosset, M. Capri, Ounissa Ait-Ahmed. A single mutation results in diploid gamete formation and parthenogenesis in a Drosophila yemanuclein-alpha meiosis I defective mutant.. BMC Genetics, 2010, 11 (1), pp.104. ⟨10.1186/1471-2156-11-104⟩. ⟨hal-00575064⟩
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Al Mougenot, D. Betemps, Kn Hogeveen, Gg Kovacs, L. Chouaf-Lakhdar, et al.. Production of a monoclonal antibody, against human alpha-synuclein, in a subpopulation of C57BL/6J mice, presenting a deletion of the alpha-synuclein locus.. Journal of Neuroscience Methods, 2010, 192 (2), pp.268-276. ⟨10.1016/j.jneumeth.2010.08.010⟩. ⟨hal-00529319⟩
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N. Pallares-Ruiz, L. Philibert, B. Dumont, Aude Fabre, L. Cuisset, et al.. Combined mutation and rearrangement screening by quantitative PCR high-resolution melting: is it relevant for hereditary recurrent Fever genes?. PLoS ONE, 2010, 5 (11), pp.e14096. ⟨10.1371/journal.pone.0014096⟩. ⟨hal-00575068⟩
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Mj Pillaire, Janick Selves, K. Gordien, P. Gouraud, C. Gentil, et al.. A DNA replication signature of progression and negative outcome in colorectal cancer. Oncogene, 2010, 29 (6), pp.876-887. ⟨10.1038/onc.2009.378⟩. ⟨hal-00459069⟩
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Nathalie Pironon, Jacques Puechberty, Gérard Roizès. Molecular and evolutionary characteristics of the fraction of human alpha satellite DNA associated with CENP-A at the centromeres of chromosomes 1, 5, 19, and 21.. BMC Genomics, 2010, 11 (1), pp.195. ⟨10.1186/1471-2164-11-195⟩. ⟨inserm-00617235⟩
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W. Piwko, Mh Olma, M. Held, J. Bianco, Pg Pedrioli, et al.. RNAi-based screening identifies the Mms22L-Nfkbil2 complex as a novel regulator of DNA replication in human cells. EMBO Journal, 2010, 29 (24), pp.4210-4222. ⟨10.1038/emboj.2010.304⟩. ⟨hal-00575079⟩
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Am Poveda, Le Clech M, P. Pasero. Transcription and replication: Breaking the rules of the road causes genomic instability. Transcription, 2010, 1 (2), pp.99-102. ⟨10.4161/trns.1.2.12665⟩. ⟨hal-00615514⟩
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Milena Preti, Cyril Ribeyre, Chiara Pascali, Maria Cristina Bosio, Barbara Cortelazzi, et al.. The Telomere-Binding Protein Tbf1 Demarcates snoRNA Gene Promoters in Saccharomyces cerevisiae. Molecular Cell, 2010, 38 (4), pp.614-620. ⟨10.1016/j.molcel.2010.04.016⟩. ⟨hal-02382135⟩
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Monique Provansal, S. Roche, M. Pastore, D. Casanova, M. Belondrade, et al.. Proteomic consequences of expression and pathological conversion of the prion protein in inducible neuroblastoma N2a cells. Prion, 2010, 4 (4), pp.4, 4. ⟨10.4161/pri.4.4.13435⟩. ⟨hal-00529322⟩
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Fabienne Rayne, Solène Debaisieux, Hocine Yezid, Yea-Lih Lin, Clément Mettling, et al.. Phosphatidylinositol-(4,5)-bisphosphate enables efficient secretion of HIV-1 Tat by infected T-cells. EMBO Journal, 2010, 29 (8), pp.1348-1362. ⟨10.1038/emboj.2010.32⟩. ⟨hal-02147182⟩
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R. Rouget, C. Papin, A. Boureux, Ac Meunier, B. Franco, et al.. Maternal mRNA deadenylation and decay by thepiRNA pathway in the early Drosophila embryo. Nature, 2010, 467 (7319), pp.1128-1132. ⟨10.1038/nature09465⟩. ⟨hal-00533320⟩
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B. Schuettengruber, Giacomo Cavalli. The DUBle life of polycomb complexes. Developmental Cell, 2010, 18 (6), pp.878-880. ⟨10.1016/j.devcel.2010.06.001⟩. ⟨hal-00508839⟩
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S. Shahab-Osterloh, F. Witte, A. Hoffmann, A. Winkel, S. Laggies, et al.. Mesenchymal stem cell-dependent formation of heterotopic tendon-bone insertions (osteotendinous junctions).. STEM CELLS, 2010, 28 (9), pp.1590-1601. ⟨10.1002/stem.487⟩. ⟨hal-00529327⟩
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G. Sharma, S. So, A. Gupta, R. Kumar, C Cayrou, et al.. MOF and Histone H4 Acetylation at Lysine 16 Are Critical for DNA Damage Response and Double-Strand Break Repair. Molecular and Cellular Biology, 2010, 30 (14), pp.3582-3595. ⟨10.1128/mcb.01476-09⟩. ⟨hal-02154222⟩
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B. Sobhian, Nadine Laguette, A. Yatim, M. Nakamura, Y. Levy, et al.. HIV-1 Tat assembles a multifunctional transcription elongation complex and stably associates with the 7SK snRNP.. Molecular Cell, 2010, 38 (3), pp.439-451. ⟨10.1016/j.molcel.2010.04.012⟩. ⟨hal-00485594⟩
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Bijan Sobhian, Nadine Laguette, Ahmad Yatim, Mirai Nakamura, Yves Levy, et al.. HIV-1 Tat complexes reveal subunit composition of active P-TEFb and stable association with 7SKsnRNP. Journal of the International AIDS Society, 2010, 13 (Suppl 3), pp.O5. ⟨10.1186/1758-2652-13-S3-O5⟩. ⟨inserm-00617222⟩
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Thierry Soussi, Dalil Hamroun, Linn Hjortsberg, Jean Michel Rubio-Nevado, Jean Louis Fournier, et al.. MUT-TP53 2.0: a novel versatile matrix for statistical analysis of TP53 mutations in human cancera. Human Mutation, 2010, 31 (9), pp.1020 - 1025. ⟨10.1002/humu.21313⟩. ⟨hal-01681836⟩
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F. Talotta, T. Mega, G. Bossis, L. Casalino, J. Basbous, et al.. Heterodimerization with Fra-1 cooperates with the ERK pathway to stabilize c-Jun in response to the RAS oncoprotein. Oncogene, 2010, 29 (33), pp.4732--40. ⟨10.1038/onc.2010.211⟩. ⟨hal-02193625⟩
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C. Temme, L. Zhang, E. Kremmer, C. Ihling, A. Chartier, et al.. Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation. RNA, 2010, 16 (7), pp.1356-1370. ⟨10.1261/rna.2145110⟩. ⟨hal-00495629⟩
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Isabelle Touitou, André Mégarbané. Qu'attendre d'un diagnostic genetique?. Revue Méditerranéenne de Génétique Humaine, 2010, 1, pp.47-50. ⟨hal-00634745⟩
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S. Tuduri, Laure Crabbé, C. Conti, H. Tourriere, H. Holtgreve-Grez, et al.. Erratum: Topoisomerase I suppresses genomic instability by preventing interference between replication and transcription.. Nature Cell Biology, 2010, 12 (11), pp.1122. ⟨10.1038/ncb1110-1122⟩. ⟨hal-00533325⟩
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S. Tuduri, H. Tourriere, P. Pasero. Defining replication origin efficiency using DNA fiber assays. Chromosome Research, 2010, 18 (1), pp.91-102. ⟨10.1007/s10577-009-9098-y⟩. ⟨hal-00463217⟩
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S. Tuduri, Laure Crabbé, H. Tourriere, A. Coquelle, P. Pasero. Does interference between replication and transcription contribute to genomic instability in cancer cells?. Cell Cycle, 2010, 9, pp.10. ⟨10.4161/cc.9.10.11539⟩. ⟨hal-00487306⟩
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Journal articles

2009

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C. Alabert, J. Bianco, P. Pasero. Differential regulation of homologous recombination at DNA breaks and replication forks by the Mrc1 branch of the S-phase checkpoint.. EMBO Journal, 2009, 28 (8), pp.1131-1141. ⟨10.1038/emboj.2009.75⟩. ⟨hal-00399013⟩
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W. Aouacheri, S. Saka, Djelloul Djafer, G. Lefranc. Protective effect of diclofenac towards the oxidative stress induced by paracetamol toxicity in rats. Annales de Biologie Clinique, 2009, 67 (6), pp.319-327. ⟨10.1684/abc.2009.0376⟩. ⟨hal-00444238⟩
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David Attias, Chantal Stheneur, Carine Roy, Gwenaëlle Collod-Béroud, Delphine Detaint, et al.. Comparison of Clinical Presentations and Outcomes Between Patients With TGFBR2 and FBN1 Mutations in Marfan Syndrome and Related Disorders. Circulation, 2009, 120 (25), pp.2541 - 2549. ⟨10.1161/CIRCULATIONAHA.109.887042⟩. ⟨hal-01669916⟩
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Frédéric Baudat, Bernard de Massy. Parallel detection of crossovers and non-crossovers in mouse germ cells. Methods in Molecular Biology, 2009, 557, pp.305-322. ⟨10.1007/978-1-59745-527-5_19⟩. ⟨hal-00430758⟩
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E. Ben-Chetrit, I. Touitou. Familial Mediterranean Fever in the world. Arthritis and Rheumatism, 2009, 61 (10), pp.1447-1453. ⟨10.1002/art.24458⟩. ⟨hal-00429294⟩
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F. Betsou, R. Barnes, T. Burke, D. Coppola, Y. Desouza, et al.. Human Biospecimen Research: Experimental Protocol and Quality Control Tools. Cancer Epidemiology, Biomarkers and Prevention, 2009, 18 (4), pp.1017-1025. ⟨10.1158/1055-9965.EPI-08-1231⟩. ⟨hal-00409884⟩
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E. Bolcun-Filas, R. Speed, M. Taggart, C. Grey, Bernard de Massy, et al.. Mutation of the mouse Syce1 gene disrupts synapsis and suggests a link between synaptonemal complex structural components and DNA repair.. PLoS Genetics, 2009, 5 (2), pp.e1000393. ⟨10.1371/journal.pgen.1000393⟩. ⟨hal-00367784⟩
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B. Bonafoux, T. Commes. Serial analysis of gene expression adapted for downsized extracts (SAGE/SADE) analysis in reticulocytes. Methods in Molecular Biology, 2009, 496, pp.299-311. ⟨10.1007/978-1-59745-553-4_20⟩. ⟨hal-00399017⟩
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J. Buard, Pascale Mosoni, C. Grey, Bernard de Massy. Distinct histone modifications define initiation and repair of meiotic recombination in mouse. EMBO Journal, 2009, 28 (17), pp.2616-2624. ⟨10.1038/emboj.2009.207⟩. ⟨hal-00429298⟩
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J.-F. Chabas, C. Dellavolpe, Y. Riah, T. Bron, Y. Reynier, et al.. Cranial reconstruction after a post-craniotomy empyema.. Journal of Plastic, Reconstructive and Aesthetic Surgery, 2009, 62 (6), pp.e131-5. ⟨10.1016/j.bjps.2008.10.001⟩. ⟨hal-00417377⟩
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C. Chable-Bessia, O. Meziane, D. Latreille, R. Triboulet, A. Zamborlini, et al.. Suppression of HIV-1 replication by microRNA effectors. Retrovirology, 2009, 6 (1), pp.26. ⟨10.1186/1742-4690-6-26⟩. ⟨hal-00367787⟩
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A. Chartier, V. Raz, E. Sterrenburg, Ct Verrips, Sm van Der Maarel, et al.. Prevention of oculopharyngeal muscular dystrophy by muscular expression of Llama single-chain intrabodies in vivo. Human Molecular Genetics, 2009, 18 (10), pp.1849-1859. ⟨10.1093/hmg/ddp101⟩. ⟨hal-00399030⟩
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P. Corbeau, J. Reynes. CCR5 antagonism in HIV infection: ways, effects, and side effects. AIDS. Official journal of the international AIDS Society, 2009, 23 (15), pp.1931-1943. ⟨10.1097/QAD.0b013e32832e71cd⟩. ⟨hal-00429305⟩
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Philippe Coulombe, Geneviève Rodier, Sylvain Meloche. Un nouvel axe du mal tumoral ?. Médecine/Sciences, 2009, 25 (8-9), pp.673-675. ⟨10.1051/medsci/2009258-9673⟩. ⟨hal-03101785⟩
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Albertina de Sario. Clinical and molecular overview of inherited disorders resulting from epigenomic dysregulation. European Journal of Medical Genetics, 2009, 52 (6), pp.363-372. ⟨10.1016/j.ejmg.2009.07.004⟩. ⟨hal-00444260⟩
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S. Denden, W. Braham, F. Amri, R. Lakhdar, G. Lefranc, et al.. Biochemical and molecular diagnosis of alpha 1 antitrypsin deficiency in a Tunisian family.. Annales de Biologie Clinique, 2009, 67 (4), pp.441-445. ⟨10.1684/abc.2009.0340⟩. ⟨hal-00429308⟩
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Grégory Eot-Houllier, Géraldine Fulcrand, Laura Magnaghi-Jaulin, Christian Jaulin. Histone deacetylase inhibitors and genomic instability.. Cancer Letters, 2009, 274 (2), pp.169-76. ⟨10.1016/j.canlet.2008.06.005⟩. ⟨hal-00301048⟩
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G Faivre, Gwenaëlle Collod-Béroud, C Callewaert, C Child, L. Loeys, et al.. Pathogenic FBN1 mutations in 146 adults not meeting clinical diagnostic criteria for Marfan syndrome: Further delineation of type 1 fibrillinopathies and focus on patients with an isolated major criterion. American Journal of Medical Genetics Part A, 2009, 149A (5), pp.854 - 860. ⟨10.1002/ajmg.a.32809⟩. ⟨hal-01669908⟩
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Kb Falbo, C. Alabert, Y. Katou, S. Wu, J. Han, et al.. Involvement of a chromatin remodeling complex in damage tolerance during DNA replication.. Nature Structural and Molecular Biology, 2009, 16 (11), pp.1167-1172. ⟨10.1038/nsmb.1686⟩. ⟨hal-00430765⟩
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Audrey Gabelle, S. Roche, Sylvain Lehmann. Les marqueurs biologiques protéiques du liquide céphalorachidien : caractéristiques et implications cliniques dans les démences. Revue Neurologique, 2009, 165 (3), pp.213-222. ⟨10.1016/j.neurol.2008.05.004⟩. ⟨hal-00409885⟩
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B. Gathmann, B. Grimbacher, J. Beauté, Y. Dudoit, N. Mahlaoui, et al.. The European internet-based patient and research database for primary immunodeficiencies: results 2006-2008. Clinical and Experimental Immunology, 2009, 157 (suppl 1), pp.3-11. ⟨10.1111/j.1365-2249.2009.03954.x⟩. ⟨hal-00429339⟩
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S. Grandemange, S. Soler, I. Touitou. Expression of the familial Mediterranean fever (FMF) gene is regulated by nonsense-mediated decay (NMD). Human Molecular Genetics, 2009, 18 (24), pp.4746-4755. ⟨10.1093/hmg/ddp437⟩. ⟨hal-00444265⟩
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D. Gras, L. Tiers, G. Vachier, L. Denis de Senneville, A. Bourdin, et al.. Regulation of CXCR/IL-8 in human airway epithelial cells. International Archives of Allergy and Immunology, 2009, 152, pp.140-150. ⟨10.1159/000265535⟩. ⟨hal-00452354⟩
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C. Grey, Frédéric Baudat, Bernard de Massy. Genome-Wide Control of the Distribution of Meiotic Recombination. PLoS Biology, 2009, 7 (2), pp.e35. ⟨10.1371/journal.pbio.1000035⟩. ⟨hal-00409886⟩
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John D. Hansen, Louis Du Pasquier, Marie-Paule Lefranc, Virginie Lopez, Abdenour Benmansour, et al.. The B7 family of immunoregulatory receptors: A comparative and evolutionary perspective. Molecular Immunology, 2009, 46 (3), pp.457-472. ⟨10.1016/j.molimm.2008.10.007⟩. ⟨hal-00357155⟩
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M. Hasnaoui, Aurélien J Doucet, O. Meziane, N. Gilbert. Ancient repeat sequence derived from U6 snRNA in primate genomes.. Gene, 2009, 448 (2), pp.139-144. ⟨10.1016/j.gene.2009.07.015⟩. ⟨hal-00430766⟩
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Béatrice Horard, Angéline Eymery, Geneviève Fourel, Nikita Vassetzky, Jacques Puechberty, et al.. Global analysis of DNA methylation and transcription of human repetitive sequences.. Epigenetics, 2009, 4 (5), pp.339-50. ⟨10.4161/epi.4.5.9284⟩. ⟨hal-00851248⟩
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R. Jefferis, Mp Lefranc. Human Immunoglobulin Allotypes: Possible implications for immunogenicity. mAbs, 2009, 1 (4), pp.1-7. ⟨10.4161/mabs.1.4.9122⟩. ⟨hal-00409887⟩
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N. Kalfa, Ra Veitia, Ba Benayoun, B. Boizet-Bonhoure, C. Sultan. The new molecular biology of granulosa cell tumors of the ovary.. Genome Medicine, 2009, 1 (8), pp.81. ⟨10.1186/gm81⟩. ⟨hal-00429361⟩
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N. Kalfa, P. Philibert, C. Sultan. Is hypospadias a genetic, endocrine or environmental disease, or still an unexplained malformation?. International Journal of Andrology, 2009, 32 (3), pp.187-197. ⟨10.1111/j.1365-2605.2008.00899.x⟩. ⟨hal-00452358⟩
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N. Kalfa, P. Philibert, C. Sultan. Hypospadias and genetics. Archives de Pédiatrie, 2009, 16 (6), pp.951-953. ⟨10.1074/jbc.M109.009688⟩. ⟨hal-00452351⟩
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N. Kalfa,, P. Philibert, C. Patte, E. Thibaud, C. Pienkowski, et al.. Juvenile granulosa-cell tumor: Clinical and molecular expression. Gynécologie Obstétrique & Fertilité, 2009, 37 (1), pp.33-44. ⟨10.1016/j.gyobfe.2008.06.026⟩. ⟨hal-00357156⟩
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I. Koné-Paut, V. Hentgen, S. Guillaume-Czitrom, S. Compeyrot-Lacassagne, Ta Tran, et al.. The clinical spectrum of 94 patients carrying a single mutated MEFV allele. Rheumatology, 2009, 48 (7), pp.840-842. ⟨10.1093/rheumatology/kep121⟩. ⟨hal-00399032⟩
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Sylvain Lehmann, S. Roche, Y. Allory, A. Barthelaix, J.-L. Beaudeux, et al.. Preanalytical guidelines for clinical proteomics investigation of biological fluids. Annales de Biologie Clinique, 2009, 67 (6), pp.629-639. ⟨10.1684/abc.2009.0374⟩. ⟨hal-00444355⟩
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Nicolas Lévy, M. Oehlmann, F. Delalande, Hp Nasheuer, A. van Dorsselaer, et al.. XRCC1 interacts with the p58 subunit of DNA Pola-primase and may coordinate DNA repair and replication during S phase. Nucleic Acids Research, 2009, 37 (10), pp.3177-3188. ⟨10.1093/nar/gkp144⟩. ⟨hal-00399041⟩
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M. Lutzmann, M. Mechali. How to load a replicative helicase onto chromatin: a more and more complex matter during evolution. Cell Cycle, 2009, 8 (9), pp.1309-1313. ⟨10.4161/cc.8.9.8216⟩. ⟨hal-00399043⟩
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C. Magdelaine-Beuzelin, S. Vermeire, M. Goodall, Filip Baert, M. Noman, et al.. IgG1 heavy chain-coding gene polymorphism (G1m allotypes) and development of antibodies-to-infliximab.. Pharmacogenetics and Genomics, 2009, 19 (5), pp.383-387. ⟨10.1097/FPC.0b013e32832a06bf⟩. ⟨hal-00399050⟩
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M. Marqués, A. Kumar, Am Poveda, S. Zuluaga, C. Hernández, et al.. Specific function of phosphoinositide 3-kinase beta in the control of DNA replication.. Proceedings of the National Academy of Sciences of the United States of America, 2009, 106 (18), pp.7525-7530. ⟨10.1073/pnas.0812000106⟩. ⟨hal-00399056⟩
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Am Martinez, B. Schuettengruber, S. Sakr, A. Janic, C. Gonzalez, et al.. Polyhomeotic has a tumor suppressor activity mediated by repression of Notch signaling. Nature Genetics, 2009, 41 (10), pp.1076-1082. ⟨10.1038/ng.414⟩. ⟨hal-00429476⟩
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Alexandre Martiniere, Daniel Gargani, Marilyne Uzest, Stéphane Blanc, Nicole Lautredou, et al.. A role for plant microtubules in the formation of transmission-specific inclusion bodies of Cauliflower mosaic virus. The Plant Journal, 2009, 58 (1), pp.135-146. ⟨10.1111/j.1365-313X.2008.03768.x⟩. ⟨hal-02088280⟩
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S. Massari, F. Bellahcene, G. Vaccarelli, G. Carelli, M. Mineccia, et al.. The deduced structure of the T cell receptor gamma locus in Canis lupus familiaris. Molecular Immunology, 2009, 46 (13), pp.2728-2736. ⟨10.1016/j.molimm.2009.05.008⟩. ⟨hal-00410082⟩
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B. Moniot, F. Declosmenil, F. Barrionuevo, G. Scherer, K. Aritake, et al.. The PGD2 pathway, independently of FGF9, amplifies SOX9activity in Sertoli cells during male sexual differentiation. Development (Cambridge, England), 2009, 136 (11), pp.1813-1821. ⟨10.1242/dev.032631⟩. ⟨hal-00399074⟩
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C. Notarnicola, B. Boizet-Bonhoure, P. de Santa Barbara, Ma Osta, D. Cattan. Characterization of new mutations in the 5'-flanking region of the familial Mediterranean fever gene.. Genes and Immunity, 2009, 10 (3), pp.273-279. ⟨10.1038/gene.2009.8⟩. ⟨hal-00399080⟩
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F. Pappalardo, Md Halling-Brown, N. Rapin, P. Zhang, D. Alemani, et al.. ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization.. Briefings in Bioinformatics, 2009, 10 (3), pp.330-340. ⟨10.1093/bib/bbp014⟩. ⟨hal-00399085⟩
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T. Pelat, M. Hust, M. Hale, Mp Lefranc, S. Dübel, et al.. Isolation of a human-like antibody fragment (scFv) that neutralizes ricin biological activity. BMC Biotechnology, 2009, 9, pp.60. ⟨10.1186/1472-6750-9-60⟩. ⟨hal-00410069⟩
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P. Perney, C. Turriere, P. Portalès, H. Rigole, C. Psomas, et al.. CXCR3 expression on peripheral CD4(+) T cells as a predictive marker of response to treatment in chronic hepatitis C.. Clinical Immunology, 2009, 132 (1), pp.55-62. ⟨10.1016/j.clim.2009.03.521⟩. ⟨hal-00399087⟩
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Nicolas Philippe, Anthony Boureux, Laurent Brehelin, Jorma Tarhio, Thérèse Commes, et al.. Estimation of sequence errors and capacity of genomic annotation in transcriptomic and DNA-protein interaction assays based on next generation sequencers. Cellular Oncology, 2009, 31 (2), pp.145-146. ⟨lirmm-00416012⟩
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Nicolas Philippe, Anthony Boureux, Laurent Brehelin, Jorma Tarhio, Thérèse Commes, et al.. Using reads to annotate the genome: influence of length, background distribution, and sequence errors on prediction capacity. Nucleic Acids Research, 2009, 37 (15 e104), pp.11. ⟨10.1093/nar/gkp492⟩. ⟨lirmm-00415899⟩
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P. Portales, S. Fabre, T. Vincent, C. Desmetz, B. Reant, et al.. Peripheral blood T4 cell surface CCR5 density as a marker of activity in rheumatoid arthritis treated with anti-CD20 monoclonal antibody. Immunology, 2009, 128 (suppl 1), pp.e738-745. ⟨10.1111/j.1365-2567.2009.03076.x⟩. ⟨hal-00429383⟩
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J. Puechberty, C. Rittore, L. Philibert, G. Lefort, G. Burlet, et al.. Homozygous NLRP7 mutations in a Moroccan woman with recurrent reproductive failure.. Clinical Genetics, 2009, 75 (3), pp.298-300. ⟨10.1111/j.1399-0004.2008.01098.x⟩. ⟨hal-00399091⟩
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A. Relaño-Ginés, A. Gabelle, S. Lehmann, Ollivier Milhavet, C. Crozet. Gene and cell therapy for prion diseases. Infectious Disorders - Drug Targets, 2009, 9 (1), pp.58-68. ⟨10.2174/1871526510909010058⟩. ⟨hal-00367789⟩
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G. Reuter, Giacomo Cavalli. Epigenetics and the control of multicellularity. Workshop on Chromatin at the Nexus of Cell Division and Differentiation.. EMBO Reports, 2009, 10 (1), pp.25-29. ⟨10.1038/embor.2008.226⟩. ⟨hal-00357141⟩
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Cyril Ribeyre, Judith Lopes, Jean-Baptiste Boulé, Aurele Piazza, Aurore Guédin, et al.. The Yeast Pif1 Helicase Prevents Genomic Instability Caused by G-Quadruplex-Forming CEB1 Sequences In Vivo. PLoS Genetics, 2009, 5 (5), pp.e1000475. ⟨10.1371/journal.pgen.1000475⟩. ⟨hal-02109281⟩
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Stéphane Roche, B. Delorme, R. Oostendorp, R. Barbet, C. Caton, et al.. Comparative proteomic analysis of human mesenchymal and embryonic stem cells: towards the definition of a mesenchymal stem cell proteomic signature. Proteomics, 2009, 9 (2), pp.223-232. ⟨10.1002/pmic.200800035⟩. ⟨hal-00357170⟩
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Stéphane Roche, Laurent Tiers, Monique Provansal, Martial Séveno, Marie-Thérèse Piva, et al.. Depletion of one, six, twelve or twenty major blood proteins before proteomic analysis: the more the better?. Journal of Proteomics, 2009, 72 (6), pp.945-951. ⟨10.1016/j.jprot.2009.03.008⟩. ⟨hal-00410072⟩
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Ali Saib, Monsef Benkirane. Endogenous Retroviruses: Thierry Heidmann wins the 2009 Retrovirology prize. Retrovirology, 2009, 6 (1), pp.108. ⟨10.1186/1742-4690-6-108⟩. ⟨inserm-00617239⟩
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Nehmé Saksouk, Nikita Avvakumov, Karen Champagne, Tiffany Hung, Yannick Doyon, et al.. HBO1 HAT Complexes Target Chromatin throughout Gene Coding Regions via Multiple PHD Finger Interactions with Histone H3 Tail. Molecular Cell, 2009, 33 (2), pp.257-265. ⟨10.1016/j.molcel.2009.01.007⟩. ⟨hal-02154225⟩
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Anne Saumet, Guillaume Vetter, Manuella Bouttier, Elodie Portales-Casamar, Wyeth W. Wasserman, et al.. Transcriptional repression of microRNA genes by PML-RARA increases expression of key cancer proteins in acute promyelocytic leukemia.. Blood, 2009, 113 (2), pp.412-21. ⟨10.1182/blood-2008-05-158139⟩. ⟨hal-00367055⟩
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B. Schuettengruber, M. Ganapathi, B. Leblanc, M. Portoso, R. Jaschek, et al.. Functional Anatomy of Polycomb and Trithorax Chromatin Landscapes in Drosophila Embryos.. PLoS Biology, 2009, 7 (1), pp.e13. ⟨10.1371/journal.pbio.1000013⟩. ⟨hal-00357174⟩
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B. Schuettengruber, Giacomo Cavalli. Recruitment of Polycomb group complexes and their role in the dynamic regulation of cell fate choice.. Development (Cambridge, England), 2009, 136 (21), pp.3531-3542. ⟨10.1242/dev.033902⟩. ⟨hal-00429406⟩
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C. Segarra, S. Lehmann, J. Coste. Prion protein expression and processing in human mononuclear cells: the impact of the codon 129 prion gene polymorphism. PLoS ONE, 2009, 4 (6), pp.e5796. ⟨10.1371/journal.pone.0005796⟩. ⟨hal-00410079⟩
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T. Sexton, Frederic Bantignies, Giacomo Cavalli. Genomic interactions: Chromatin loops and gene meeting points in transcriptional regulation.. Seminars in Cell and Developmental Biology, 2009, 20 (7), pp.849-855. ⟨10.1016/j.semcdb.2009.06.004⟩. ⟨hal-00430769⟩
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C Thauvin-Robinet, A Munck, F Huet, Emmanuelle Genin, G Bellis, et al.. The very low penetrance of cystic fibrosis for the R117H mutation: a reappraisal for genetic counselling and newborn screening. Journal of Medical Genetics, 2009, 46 (11), pp.752-758. ⟨10.1136/jmg.2009.067215⟩. ⟨hal-03828987⟩
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Marc Thiry, Thierry Cheutin, Françoise Lamaye, Nicolas Thelen, U. Thomas Meier, et al.. Localization of Nopp140 within mammalian cells during interphase and mitosis. Histochemistry and Cell Biology, 2009, 132 (2), pp.129-140. ⟨10.1007/s00418-009-0599-8⟩. ⟨hal-02328197⟩
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M. Tittel-Elmer, C. Alabert, P. Pasero, Ja Cobb. The MRX complex stabilizes the replisome independently of the S phase checkpoint during replication stress. EMBO Journal, 2009, 28 (8), pp.1142-1156. ⟨10.1038/emboj.2009.60⟩. ⟨hal-00399094⟩
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I. Touitou, C. Rittore, L. Philibert, J. Yagüe, Y. Shinar, et al.. An international external quality assessment for molecular diagnosis of hereditary recurrent fevers: a 3-year scheme demonstrates the need for improvement.. European Journal of Human Genetics, 2009, 17 (7), pp.890-896. ⟨10.1038/ejhg.2008.253⟩. ⟨hal-00399098⟩
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I. Touitou, V. Hentgen, Ai Koné-Paut. Web resources for rare auto-inflammatory diseases: towards a common patient registry.. Rheumatology, 2009, 48 (6), pp.665-669. ⟨10.1093/rheumatology/kep056⟩. ⟨hal-00399100⟩
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Sandie Tuduri, Laure Crabbé, Chiara Conti, Hélène Tourrière, Heidi Holtgreve-Grez, et al.. Topoisomerase 1 suppresses replication stress and genomic instability by preventing interference between replication and transcription.. Nature Cell Biology, 2009, 11 (11), pp.1315-1324. ⟨10.1038/ncb1984⟩. ⟨hal-00430775⟩
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France Tuffery-Giraud, Christophe Béroud, France Leturcq, Rabah Ben Yaou, Dalil Hamroun, et al.. Genotype-phenotype analysis in 2,405 patients with a dystrophinopathy using the UMD-DMD database: a model of nationwide knowledgebase. Human Mutation, 2009, 30 (6), pp.934 - 945. ⟨10.1002/humu.20976⟩. ⟨hal-01681838⟩
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Yan-Chao Wu, Guillaume Bernadat, Ge?raldine Masson, Ce?dric Couturier, Thierry Schlama, et al.. Synthetic Studies on (-)-Lemonomycin: An Efficient Asymmetric Synthesis of Lemonomycinone Amide.. Journal of Organic Chemistry, 2009, 74 (5), pp.2046-2052. ⟨10.1021/jo8027449⟩. ⟨hal-00373613⟩
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Journal articles

2008

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Sandrine Alais, Sabrina Simoes, Dominique Baas, Sylvain Lehmann, Graça Raposo, et al.. Mouse neuroblastoma cells release prion infectivity associated with exosomal vesicles. Biology of the Cell, 2008, 100 (10), pp.603-618. ⟨10.1042/BC20080025⟩. ⟨hal-02328557⟩
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A. Arsic, D. Mamaeva, Nj Lamb, Arnaud Fernandez. Muscle-Derived Stem Cells isolated as Non-Adherent Population give rise to Cardiac, Skeletal Muscle and Neural Lineages. Experimental Cell Research, 2008, 314 (6), pp.1266-1280. ⟨10.1016/j.yexcr.2008.01.009⟩. ⟨hal-00266272⟩
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J. Basbous, Cyril Berthenet, Magali Venoux, Claude Prigent, Anne Fernandez, et al.. ASAP is a novel substrate of the oncogenic mitotic kinase Aurora-A : phosphorylation on Ser625 is essential to spindle formation and mitosis. Human Molecular Genetics, 2008, 17 (2), pp.215-224. ⟨10.1093/hmg/ddm298⟩. ⟨hal-00202612⟩
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David Baux, Valérie Faugère, Lise Larrieu, Sandie Le Guédard-Méreuze, Dalil Hamroun, et al.. UMD-USHbases: a comprehensive set of databases to record and analyse pathogenic mutations and unclassified variants in seven Usher syndrome causing genes. Human Mutation, 2008, 29 (8), pp.E76 - E87. ⟨10.1002/humu.20780⟩. ⟨hal-01681852⟩
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E. Ben-Chetrit, I. Touitou. A patient with periodic fever syndrome: a 20-year delay in diagnosis. Scandinavian Journal of Rheumatology, 2008, 38 (1), pp.71-73. ⟨10.1080/03009740802192068⟩. ⟨hal-00400393⟩
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Beatrice Benayoun, Stephen Baghdiguian, Alicia Lajmanovich, Marc Bartoli, Nathalie Danièle, et al.. NF-kappa B-dependent expression of the antiapoptotic factor c-FLIP is regulated by calpain 3, the protein involved in limb-girdle muscular dystrophy type 2A. FASEB Journal, 2008, 22 (5), pp.1521-1529. ⟨10.1096/fj.07-8701com⟩. ⟨hal-01610041⟩
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Geneviève Rodier, Philippe Coulombe, Pierre-Luc Tanguay, Christel Boutonnet, Sylvain Meloche. Phosphorylation of Skp2 regulated by CDK2 and Cdc14B protects it from degradation by APCCdh1 in G1 phase. EMBO Journal, 2008, 27 (4), pp.679-691. ⟨10.1038/emboj.2008.6⟩. ⟨hal-03101860⟩
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Ev Smirnova, Ts Collingwooda, C. Bisbal, Om Tsygankovae, M. Bogusha, et al.. TULA protein binds to ABCE-1, a host factor of HIV-1 assembly and inhibit HIV-1 biogenesis in a UBA-dependent fashion. Virology, 2008, 372 (1), pp.10-23. ⟨10.1016/j.virol.2007.10.012⟩. ⟨hal-00259555⟩
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I. Solovei, P. Pasero, N. Visa. A journey into the nucleus. Conference on Nuclear Structure and Dynamics.. EMBO Reports, 2008, 9 (3), pp.228-233. ⟨10.1038/embor.2008.18⟩. ⟨hal-00266288⟩
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S. Stanojcic, Jm Lemaitre, K. Brodolin, E. Danis, M. Mechali. In Xenopus egg extracts DNA replication initiates preferentially at or near asymmetric AT sequences.. Molecular and Cellular Biology, 2008, 28 (17), pp.5265-5274. ⟨10.1128/MCB.00181-08⟩. ⟨hal-00322416⟩
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A. Svetlanov, Frédéric Baudat, Pe Cohen, Bernard de Massy. Distinct Functions of MLH3 at Recombination Hot Spots in the Mouse.. Genetics, 2008, 178 (4), pp.1937-1945. ⟨10.1534/genetics.107.084798⟩. ⟨hal-00287921⟩
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I. Touitou, I. Kone-Paut. Autoinflammatory diseases.. Best Practice and Research: Clinical Rheumatology, 2008, 22 (5), pp.811-829. ⟨10.1016/j.berh.2008.08.009⟩. ⟨hal-00345938⟩
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Karine Toupet, Valerie Compan, Carole Crozet, Chantal Mourton-Gilles, Nadine Mestre-Francés, et al.. Effective Gene Therapy in a Mouse Model of Prion Diseases. PLoS ONE, 2008, 3 (7), pp.e2773. ⟨10.1371/journal.pone.0002773⟩. ⟨hal-01667611⟩
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M. Ullah, N. Pelletier, L. Xiao, S. Zhao, K. Wang, et al.. Molecular Architecture of Quartet MOZ/MORF Histone Acetyltransferase Complexes. Molecular and Cellular Biology, 2008, 28 (22), pp.6828-6843. ⟨10.1128/mcb.01297-08⟩. ⟨hal-02154226⟩
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N. Vachiery, G. Maganga, T. Lefrancois, Y. Kandassamy, F. Stachurski, et al.. Differential strain-specific diagnosis of the heartwater agent: Ehrlichia ruminantium. Infection, Genetics and Evolution, 2008, 8 (4), pp.459-466. ⟨10.1016/j.meegid.2007.06.001⟩. ⟨hal-00287922⟩
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Jc van Der Hilst, Ec Bodar, Ks Barron, J. Frenkel, Jp Drenth, et al.. Long-term follow-up, clinical features, and quality of life in a series of 103 patients with hyperimmunoglobulinemia D syndrome.. Medicine, 2008, 87 (6), pp.301-310. ⟨10.1097/MD.0b013e318190cfb7⟩. ⟨hal-00357146⟩
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Me van Gijn, S. Soler, C. de La Chapelle, M. Mulder, C. Ritorre, et al.. Search for copy number alterations in the MEFV gene using multiplex ligation probe amplification, experience from three diagnostic centres.. European Journal of Human Genetics, 2008, 16 (11), pp.1404-1406. ⟨10.1038/ejhg.2008.135⟩. ⟨hal-00357149⟩
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M. Venoux, K. Delmouly, Ollivier Milhavet, S. Vidal-Eychenié, D. Giorgi, et al.. Gene organization, evolution and expression of the microtubule-associated protein ASAP (MAP9).. BMC Genomics, 2008, 9 (1), pp.406. ⟨10.1186/1471-2164-9-406⟩. ⟨hal-00322423⟩
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A. Wagschal, H. Sutherland, K. Woodfine, A. Henckel, K. Chebli, et al.. G9a Histone Methyltransferase Contributes to Imprinting in the Mouse Placenta. Molecular and Cellular Biology, 2008, 28 (3), pp.1104-1113. ⟨10.1128/MCB.01111-07⟩. ⟨hal-02534255⟩
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Iw Zaidi,, G. Rabut, A. Poveda, H. Scheel, J. Malmström, et al.. Rtt101 and Mms1 in budding yeast form a CUL4(DDB1)-like ubiquitin ligase that promotes replication through damaged DNA. EMBO Reports, 2008, 9 (10), pp.1034-1040. ⟨10.1038/embor.2008.155⟩. ⟨hal-00331729⟩
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H. Zalzali, C. Naudin, P. Bastide, Corinne Quittau-Prévostel, C. Yaghi, et al.. CEACAM1, a SOX9 direct transcriptional target identified in the colon epithelium.. Oncogene, 2008, 27 (56), pp.7131-7138. ⟨10.1038/onc.2008.331⟩. ⟨hal-00357151⟩
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Journal articles

2007

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J. Alroy, R. Pfannl, A. Ucci, G. Lefranc, A. Frattini, et al.. Electron microscopic findings in skin biopsies from patients with infantile osteopetrosis and neuronal storage disease. Ultrastructural Pathology, 2007, 31 (5), pp.333-338. ⟨10.1080/01913120701578098⟩. ⟨hal-00193368⟩
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A. Apolloni, Lw Meredith, A. Suhrbier, Rosemary Kiernan, D. Harrich. The HIV-1 Tat protein stimulates reverse transcription in vitro. Current HIV Research, 2007, 5 (5), pp.473-483. ⟨10.2174/157016207781662443⟩. ⟨hal-00193992⟩
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C. Auziol, M. Mechali, D. Maiorano. Geminin is cleaved by caspase-3 during apoptosis in Xenopus egg extracts. Biochemical and Biophysical Research Communications, 2007, 361 (2), pp.276-208. ⟨10.1016/j.bbrc.2007.06.117⟩. ⟨hal-00167568⟩
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N. Bakkour, Yl. Lin, S. Maire, L. Ayadi, Florence Mahuteau-Betzer, et al.. Small-molecule inhibition of HIV pre-mRNA splicing as a novel antiretroviral therapy to overcome drug resistance. PLoS Pathogens, 2007, 3 (10), pp.1530-1539. ⟨10.1371/journal.ppat.0030159⟩. ⟨hal-00259118⟩
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N. Bakkour, Yea-Lih Lin, S. Maire, L. Ayadi, Florence Mahuteau-Betzer, et al.. Small-molecule inhibition of HIV pre-mRNA splicing as a novel antiretroviral therapy to overcome drug resistance. PLoS Pathogens, 2007, 3 (10), pp.e159. ⟨10.1371/journal.ppat.0030159⟩. ⟨hal-00185296⟩
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J. Basbous, D. Chalbos, R. Hipskind, I. Jariel-Encontre, Marc Piechaczyk. Ubiquitin-Independent Proteasomal Degradation of Fra-1 Is Antagonized by Erk1/2 Pathway-Mediated Phosphorylation of a Unique C-Terminal Destabilizer. Molecular and Cellular Biology, 2007, 27 (11), pp.3936-3950. ⟨10.1128/MCB.01776-06⟩. ⟨hal-02376617⟩
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Frédéric Baudat, Bernard de Massy. Regulating double-stranded DNA break repair towards crossover or non-crossover during mammalian meiosis. Chromosome Research, 2007, 15 (5), pp.565-577. ⟨10.1007/s10577-007-1140-3⟩. ⟨hal-00167570⟩
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Frédéric Baudat, Bernard de Massy. Cis- and Trans-Acting Elements Regulate the Mouse Psmb9 Meiotic Recombination Hotspot. PLoS Genetics, 2007, 3 (6), pp.1029-1039. ⟨10.1371/journal.pgen.0030100⟩. ⟨hal-00160302⟩
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A. Bencsik, S. Philippe, S. Debeer, C. Crozet, D. Calavas, et al.. Scrapie strain transmission studies in ovine PrP transgenic mice reveal dissimilar susceptibility. Histochemistry and Cell Biology, 2007, 127 (5), pp.531-539. ⟨10.1007/s00418-007-0276-8⟩. ⟨hal-00180825⟩
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David Bernard, John D. Hansen, Louis Du Pasquier, Marie-Paule Lefranc, Abdenour Benmansour, et al.. Costimulatory receptors in jawed vertebrates: Conserved CD28, odd CTLA4 and multiple BTLAs.. Developmental and Comparative Immunology, 2007, 31 (3), pp.255-271. ⟨10.1016/j.dci.2006.06.003⟩. ⟨hal-00121663⟩
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Christophe Béroud, Sylvie Tuffery-Giraud, Masafumi Matsuo, Dalil Hamroun, Véronique Humbertclaude, et al.. Multiexon skipping leading to an artificial DMD protein lacking amino acids from exons 45 through 55 could rescue up to 63% of patients with Duchenne muscular dystrophy.. Human Mutation, 2007, 28 (2), pp.196-202. ⟨10.1002/humu.20428⟩. ⟨inserm-00381940⟩
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Sandrine Biau, Sandrine Bayle, Pascal de Santa Barbara, Benoit Roig. The chick embryo: an animal model for detection of the effects of hormonal compounds. Analytical and Bioanalytical Chemistry, 2007, 387 (4), pp.1397 - 1403. ⟨10.1007/s00216-006-0870-y⟩. ⟨hal-01662737⟩
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Anthony Boureux, Emmanuel Vignal, Sandrine Faure, Philippe Fort. Evolution of the Rho Family of Ras-Like GTPases in Eukaryotes. Molecular Biology and Evolution, 2007, 24 (1), pp.203-216. ⟨10.1093/molbev/msl145⟩. ⟨hal-02267395v2⟩
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Jean-Marc Brondello, Bernard Ducommun, Anne Fernandez, Ned J. Lamb. Linking PCNA-dependent replication and ATR by human Claspin.. Biochemical and Biophysical Research Communications, 2007, 354 (4), pp.1028-33. ⟨10.1016/j.bbrc.2007.01.091⟩. ⟨inserm-00147047⟩
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J. Buard, Bernard de Massy. Playing hide and seek with mammalian meiotic crossover hotspots. Trends in Genetics, 2007, 23 (6), pp.301-309. ⟨10.1016/j.tig.2007.03.014⟩. ⟨hal-00150407⟩
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G. Cavalli. Chromosome kissing. Current Opinion in Genetics and Development, 2007, 17, pp.443-450. ⟨10.1016/j.gde.2007.08.013⟩. ⟨hal-00191004⟩
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Hb Chaabouni, M. Ksantini, R. M'Rad, M. Kharrat, M. Chaabouni, et al.. MEFV Mutations in Tunisian Patients Suffering from Familial Mediterranean Fever. Seminars in Arthritis and Rheumatism, 2007, 36 (6), pp.397-401. ⟨10.1016/j.semarthrit.2006.12.004⟩. ⟨hal-00150408⟩
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N. Chassaing, I. Touitou, D. Cattan, P. Calvas. ABCC6 is unlikely to be a modifier gene for familial Mediterranean fever severity.. Journal of Genetics, 2007, 86 (3), pp.293-295. ⟨10.1007/s12041-007-0040-9⟩. ⟨hal-00266271⟩
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T. Cheutin, C. Sauvage, P. Tchélidzé, Mf O'Donohue, H. Kaplan, et al.. Visualizing macromolecules with fluoronanogold: from photon microscopy to electron tomography. Methods in Cell Biology, 2007, 79, pp.559-574. ⟨10.1016/S0091-679X(06)79022-7⟩. ⟨hal-00193993⟩
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Alexandre Chicheportiche, J. Bernardino-Sgherri, Bernard de Massy, B. Dutrillaux. Characterization of Spo11-dependent and independent phospho-H2AX foci during meiotic prophase I in the male mouse. Journal of Cell Science, 2007, 120 (10), pp.1733-1742. ⟨10.1242/jcs.004945⟩. ⟨hal-00148056⟩
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J. Chicoine, P. Benoit, M. Paliouras, C. Gamberi, M. Simonelig, et al.. Bicaudal-C recruits CCR4-NOT deadenylase to target mRNAs and regulates oogenesis, cytoskeletal organization, and its own expression.. Developmental Cell, 2007, 13, pp.691-704. ⟨10.1016/j.devcel.2007.10.002⟩. ⟨hal-00191012⟩
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T. Claudel, G. Cretenet, A. Saumet, F. Gachon. Crosstalk between xenobiotics metabolism and circadian clock. FEBS Letters, 2007, 581, pp.3626-3633. ⟨10.1016/j.febslet.2007.04.009⟩. ⟨hal-00167575⟩
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Ml Conrad, Ma Mawer, Mp Lefranc, L. Mckinnell, J. Whitehead, et al.. The genomic sequence of the bovine T cell receptor gamma TRG loci and localization of the TRGC5 cassette.. Veterinary Immunology and Immunopathology, 2007, 115 (3-4), pp.346-356. ⟨10.1016/j.vetimm.2006.10.019⟩. ⟨hal-00128569⟩
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C. Crozet, S. Lehmann. Les prions État des lieux 20 ans après l'apparition de l'encéphalopathie spongiforme bovine / Where do we stand 20 years after the appearance of bovine spongiform encephalopathy?. Médecine/Sciences, 2007, 23 (12), pp.1148-1158. ⟨10.1051/medsci/200723121148⟩. ⟨hal-00201159⟩
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C. Crozet, S. Lezmi, Frederic Flamant, J. Samarut, T. Baron, et al.. Peripheral circulation of the prion infectious agent in transgenic mice expressing the ovine prion protein gene in neurons only. Journal of Infectious Diseases, 2007, 195 (7), pp.997-1006. ⟨10.1086/512085⟩. ⟨hal-00180826⟩
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Dorothée Deprost, Lei Yao, Rodnay Sormani, Manon Moreau, Guillaume Leterreux, et al.. The Arabidopsis TOR kinase links plant growth, yield, stress resistance and mRNA translation. EMBO Reports, 2007, 8 (9), pp.864-870. ⟨10.1038/sj.embor.7401043⟩. ⟨hal-02143282⟩
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C. Desmetz, Yea-Lih Lin, C. Mettling, P. Portales, D. Noel, et al.. Cell surface CCR5 density determines the intensity of T cell migration towards rheumatoid arthritis synoviocytes.. Clinical Immunology, 2007, 123 (2), pp.148-154. ⟨10.1016/j.clim.2007.01.004⟩. ⟨hal-00148014⟩
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I. Du Chene, E. Basyuk, Yea-Lih Lin, R. Triboulet, A. Knezevich, et al.. Suv39H1 and HP1**g** are responsible for chromatin-mediated HIV-1 transcriptional silencing and post integration latency.. EMBO Journal, 2007, 26 (2), pp.424-435. ⟨10.1038/sj.emboj.7601517⟩. ⟨hal-00130455⟩
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Olivier Duron, Anthony Boureux, Pierre Echaubard, Arnaud Berthomieu, Claire Berticat, et al.. Variability and Expression of Ankyrin Domain Genes in Wolbachia Variants Infecting the Mosquito Culex pipiens. Journal of Bacteriology, 2007, 189 (12), pp.4442-4448. ⟨10.1128/JB.00142-07⟩. ⟨halsde-00424353⟩
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Sonja Flott, Constance Alabert, Geraldine W. Toh, Rachel Toth, Neal Sugawara, et al.. Phosphorylation of Slx4 by Mec1 and Tel1 regulates the single-strand annealing mode of DNA repair in budding yeast. Molecular and Cellular Biology, 2007, 27 (18), pp.6433-6445. ⟨10.1128/MCB.00135-07⟩. ⟨hal-00176432⟩
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F. Gachon. Physiological function of PARbZip circadian clock-controlled transcription factors. Annals of Medicine, 2007, pp.1-10. ⟨10.1080/07853890701491034⟩. ⟨hal-00176447⟩
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Vp Garapati, Mp Lefranc. IMGT Colliers de Perles and IgSF domain standardization for T cell costimulatory activatory (CD28, ICOS) and inhibitory (CTLA4, PDCD1 and BTLA) receptors. Developmental and Comparative Immunology, 2007, 31 (10), pp.1050-1072. ⟨10.1016/j.dci.2007.01.008⟩. ⟨hal-00167576⟩
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Jl Garcia-Perez, A. Doucet, A. Bucheton, Jv Morvan, N. Gilbert. Distinct mechanisms for trans-mediated mobilization of cellular RNAs by the LINE-1 reverse transcriptase. Genome Research, 2007, 17 (5), pp.602-611. ⟨10.1101/gr.5870107⟩. ⟨hal-00148019⟩
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Ds Gary, A. Davidson, Ollivier Milhavet, H. Slunt, Dr Borchelt. Investigation of RNA interference to suppress expression of full-length and fragment human huntingtin.. NeuroMolecular Medicine, 2007, 9 (2), pp.145-155. ⟨10.1007/bf02685888⟩. ⟨hal-00194032⟩
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Stéphan Gasca, Franck Pellestor, Said Assou, Vanessa Loup, Tal Anahory, et al.. Identifying new human oocyte marker genes: a microarray approach.. Reproductive BioMedicine Online, 2007, 14 (2), pp.175-183. ⟨10.1016/s1472-6483(10)60785-7⟩. ⟨inserm-00131300⟩
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Sl Gasior, G. Preston, Dj Hedges, N. Gilbert, Jv Moran, et al.. Characterization of pre-insertion loci of de novo L1 insertions. Gene, 2007, 390 (1-2), pp.190-198. ⟨10.1016/j.gene.2006.08.024⟩. ⟨hal-00141858⟩
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A Girardet, C Guittard, J-P Altieri, C Templin, N. Stremler, et al.. Negative genetic neonatal screening for cystic fibrosis caused by compound heterozygosity for two large CFTR rearrangements. Clinical Genetics, 2007, 72 (4), pp.374 - 377. ⟨10.1111/j.1399-0004.2007.00850.x⟩. ⟨hal-01681868⟩
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N. Grillenzoni, A. Flandre, Christelle Lasbleiz, Jm Dura. Respective roles of the DRL receptor and its ligand WNT5 in Drosophila mushroom body development.. Development (Cambridge, England), 2007, 134 (17), pp.3089-3097. ⟨10.1242/dev.02876⟩. ⟨hal-00167579⟩
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A. Jacquot, F. Bernard, M. Dupont, S. Taviaux, D. Guyot, et al.. Revelation of an acute lymphoblastic leukemia in the delivery room. Archives de Pédiatrie, 2007, 14 (7), pp.887-889. ⟨10.1016/j.arcped.2007.03.016⟩. ⟨hal-00194039⟩
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Alexandra Jean, Grégory Conductier, C. Manrique, C. Bouras, P. Berta, et al.. Anorexia induced by activation of serotonin 5-HT4 receptors is mediated by increases in CART in the nucleus accumbens. Proceedings of the National Academy of Sciences of the United States of America, 2007, 104 (41), pp.16335 - 16340. ⟨10.1073/pnas.0701471104⟩. ⟨hal-01667673⟩
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W. Joly, B. Mugat, F. Maschat. Engrailed controls the organization of the ventral nerve cord through frazzled regulation.. Developmental Biology, 2007, 301 (2), pp.542-554. ⟨10.1016/j.ydbio.2006.10.019⟩. ⟨hal-00125036⟩
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Véronique Juvin, Aubin Penna, Jean Chemin, Yea-Lih Lin, François-A Rassendren. Pharmacological characterization and molecular determinants of the activation of transient receptor potential V2 channel orthologs by 2-aminoethoxydiphenyl borate.. Molecular Pharmacology, 2007, 72 (5), pp.1258-68. ⟨10.1124/mol.107.037044⟩. ⟨inserm-00320694⟩
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Q. Kaas, Mp Lefranc. IMGT Colliers de Perles: standardized sequence-structure representations of the IgSF and MhcSF superfamily domains. Current Bioinformatics, 2007, 2, pp.21-30. ⟨10.2174/157489307779314302⟩. ⟨hal-00125144⟩
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B. Köhler, Al Delezoïde, B. Boizet-Bonhoure, M. Mcphaul, C. Sultan, et al.. Coexpression of WT1 and AR in the genital tract of human male embryos and regulation of AR promoter activity by WT1.. Journal of Molecular Endocrinology, 2007, 38 (5), pp.547-554. ⟨10.1677/JME-06-0020⟩. ⟨hal-00148020⟩
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I. Kone-Paut, V. Hentgen, Serge Guillaume, I. Touitou. The child with fever in pyrins time.. Archives de Pédiatrie, 2007, 66 (6), pp.832-834. ⟨10.1016/j.arcped.2007.04.003⟩. ⟨hal-00149705⟩
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I. Kone-Paut, E. Sanchez, A. Le Quellec, R. Manna, I. Touitou. Autoinflammatory gene mutations in Behcet's disease. Annals of the Rheumatic Diseases, 2007, 66 (6), pp.832-834. ⟨10.1136/ard.2006.068841⟩. ⟨hal-00153564⟩
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M. Koshiji, K. Kumamoto, K. Morimura, Y. Utsumi, M. Aizawa, et al.. Correlation of N-myc Downstream-Regulated Gene 1 Expression with Clinical Outcomes of Colorectal Cancer Patients of Different Race/Ethnicity.. World Journal of Gastroenterology, 2007, 13 (20), pp.2803-2810. ⟨10.3748/wjg.v13.i20.2803⟩. ⟨hal-00160879⟩
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A. L'Honoré, V. Rana, N. Arsic, C. Franckhauser, N. Lamb, et al.. Identification of a New Hybrid SRF and MEF2-binding Element in MyoD Enhancer Required for MyoD Expression during Myogenesis.. Molecular Biology of the Cell, 2007, 18 (6), pp.1992-2001. ⟨10.1091/mbc.e06-09-0867⟩. ⟨hal-00149749⟩
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C. Lanctot, T. Cheutin, M. Cremer, Giacomo Cavalli, T. Cremer. Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions.. Nature Reviews Genetics, 2007, 8 (2), pp.104-112. ⟨10.1038/nrg2041⟩. ⟨hal-00137143⟩
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Irina Lassot, Daniel Latreille, Emilie Rousset, Marion Sourisseau, Laetitia Linares, et al.. The Proteasome Regulates HIV-1 Transcription by Both Proteolytic and Nonproteolytic Mechanisms. Molecular Cell, 2007, 25 (3), pp.369-383. ⟨10.1016/j.molcel.2006.12.020⟩. ⟨hal-04171487⟩
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F. Le Roy, M. Silhol, T. Salhezada, C. Bisbal. Regulation of mitochondrial mRNA stability by RNase L is translation dependent and controls IFNa-induced apoptosis. Cell Death and Differentiation, 2007, 14 (8), pp.1406-1413. ⟨10.1038/sj.cdd.4402130⟩. ⟨hal-00167581⟩
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N. Leban, A. Haj Khelil, H. Daimi, S. Denden, F. Slimene, et al.. C3 complement polymorphism in patients suffering from obstructive chronic bronchopneumopathy in Tunisia. Annales de Biologie Clinique, 2007, 65 (3), pp.251-256. ⟨10.1684/abc.2007.0054⟩. ⟨hal-00153565⟩
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Mp Lefranc. WHO-IUIS Nomenclature Subcommittee for immunoglobulins and T cell receptors report August 2007, 13th International Congress of Immunology, Rio de Janeiro, Brazil.. Developmental and Comparative Immunology, 2007, 32 (5), pp.461-463. ⟨10.1016/j.dci.2007.09.008⟩. ⟨hal-00259557⟩
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Mp Lefranc. WHO-IUIS Nomenclature Subcommittee for immunoglobulins and T cell receptors report.. Immunogenetics, 2007, 59 (12), pp.899-902. ⟨10.1007/s00251-007-0260-4⟩. ⟨hal-00202609⟩
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Sylvain Lehmann, A. Dupuy, K. Peoc'H, Stephane Roche, B. Baudin, et al.. Présent et futur de la Protéomique clinique. Annales de Biologie Clinique, 2007, 65 (5), pp.463-471. ⟨10.1684/abc.2007.0149⟩. ⟨hal-00179241⟩
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Jm Lemaitre, Grégoire David, M. Mechali. Replication, development and totipotency. Médecine/Sciences, 2007, 23 (3), pp.245-247. ⟨10.1051/medsci/2007233245⟩. ⟨hal-00138488⟩
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Laetitia K. Linares, Rosemary E. Kiernan, Robinson Triboulet, Christine Chable-Bessia, Daniel Latreille, et al.. Intrinsic ubiquitylation activity of PCAF controls the stability of the oncoprotein Hdm2. Nature Cell Biology, 2007, 9 (3), pp.331-8. ⟨10.1038/ncb1545⟩. ⟨hal-00121691⟩
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C. Magdelaine-Beuzelin, Q. Kaas, V. Wehbi, M. Ohresser, R. Jefferis, et al.. Structure-function relationships of the variable domains of monoclonal antibodies approved for cancer treatment. Critical Reviews in Oncology/Hematology, 2007, 64 (3), pp.210-225. ⟨10.1016/j.critrevonc.2007.04.011⟩. ⟨hal-00193362⟩
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S. Malki, Frédéric Bibeau, C. Notarnicola, S. Roques, P. Berta, et al.. Expression and Biological Role of the Prostaglandin D synthase/SOX9 pathway in Human Ovarian Cancer Cells. Cancer Letters, 2007, 255 (2), pp.182-193. ⟨10.1016/j.canlet.2007.04.007⟩. ⟨hal-00168631⟩
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Nl Manuylov, Y. Fujiwara, Ii Adameyko, F. Poulat, Sg Tevosian. The regulation of Sox9 gene expression by the GATA4/FOG2 transcriptional complex in dominant XX sex reversal mouse models. Developmental Biology, 2007, 307 (2), pp.356-367. ⟨10.1016/j.ydbio.2007.04.040⟩. ⟨hal-00194042⟩
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O. Martinez, E. Gangi, D. Mordi, S. Gupta, S. Dorevitch, et al.. Diversity in the complemntarity-determining region 3 (CDR3) of antibodies from mice with evolving anti-thyroid stimulating hormone receptor antibody responses. Endocrinology, 2007, 148 (2), pp.752-761. ⟨10.1210/en.2006-1096⟩. ⟨hal-00128566⟩
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M. Mevel Ninio, A. Pelisson, J. Kinder, Ar Campos, A. Bucheton. The flamenco locus controls the gypsy and ZAM retroviruses and is required for Drosophila oogenesis. Genetics, 2007, 175 (4), pp.1615-1624. ⟨10.1534/genetics.106.068106⟩. ⟨hal-00148035⟩
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François Michel, Maria José Costa, Aurélien J Doucet, Jean-Luc Ferat. Specialized lineages of bacterial group II introns.. Biochimie, 2007, 89 (4), pp.542-53. ⟨10.1016/j.biochi.2007.01.017⟩. ⟨hal-00167508⟩
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T. Pelat, M. Hust, E. Laffly, F. Condemine, C. Bottex, et al.. A high affinity, human-like antibody fragment (scFv) neutralising the lethal factor (LF) of Bacillus anthracis by inhibiting PA-LF complex formation. Antimicrobial Agents and Chemotherapy, 2007, 51 (8), pp.2758-2764. ⟨10.1128/AAC.01528-06⟩. ⟨hal-00167584⟩
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A. Pelisson, G. Payen-Groschene, C. Terzian, A. Bucheton. Restrictive Flamenco Alleles Are Maintained in Drosophila melanogaster Population Cages, Despite the Absence of Their Endogenous Gypsy Retroviral Targets.. Molecular Biology and Evolution, 2007, 24 (2), pp.498-504. ⟨10.1093/molbev/msl176⟩. ⟨hal-00129073⟩
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A. Pelisson, E. Sarot, G. Payen-Groschene, A. Bucheton. A novel rasiRNA-mediated silencing pathway downregulates sense gypsy transcripts in the somatic cells of the drosophila ovary. Journal of Virology, 2007, 81 (4), pp.1951-1960. ⟨10.1128/JVI.01980-06⟩. ⟨hal-00129071⟩
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G. Petitjean, Y. Al Tabaa, E. Tuaillon, C. Mettling, V. Baillat, et al.. Unintegrated HIV-1 provides an inducible and functional reservoir in untreated and highly active antiretroviral therapy-treated patients. Retrovirology, 2007, 4, pp.60. ⟨10.1186/1742-4690-4-60⟩. ⟨hal-00194043⟩
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Mj Pillaire, R. Betous, C. Conti, J. Czaplicki, P. Pasero, et al.. Upregulation of error-prone DNA polymerases beta and kappa slows down fork progression without activating the replication checkpoint. Cell Cycle, 2007, 6 (4), pp.471-477. ⟨10.4161/cc.6.4.3857⟩. ⟨hal-00138500⟩
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Marguerite Prior, Sylvain Lehmann, Man-Sun Sy, Brendan Molloy, Hilary E.M. Mcmahon. Cyclodextrins inhibit replication of scrapie prion protein in cell culture. Journal of Virology, 2007, 81 (20), pp.11195-11207. ⟨10.1128/JVI.02559-06⟩. ⟨hal-00176453⟩
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Jacques Puechberty, Christine Blaineau, Sabrina Meghamla, Lucien Crobu, Michel Pagès, et al.. Compared genomics of the strand switch region of Leishmania chromosome 1 reveal a novel genus-specific gene and conserved structural features and sequence motifs.. BMC Genomics, 2007, 8, pp.57. ⟨10.1186/1471-2164-8-57⟩. ⟨hal-00175471⟩
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Ronan Quere, Aurelie Baudet, Bruno Cassinat, Gerald Bertrand, Jacques Marti, et al.. Pharmacogenomic analysis of acute promyelocytic leukemia cells highlights CYP26 cytochrome metabolism in differential all-trans retinoic acid sensitivity. Blood, 2007, 109 (10), pp.4450-4460. ⟨10.1182/blood-2006-10-051086⟩. ⟨hal-00148039⟩
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C. Reynes, Stephane Roche, Laurent Tiers, Rodolphe Sabatier, P. Jouin, et al.. Comparison between surface and bead based MALDI profiling technologies using a single bioinformatics algorithm. Clinical Proteomics, 2007, 2, pp.145-152. ⟨10.1007/BF02752497⟩. ⟨hal-00291842⟩
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Eric Rivals, Anthony Boureux, Mireille Lejeune, Florence Ottones, Oscar Pecharromàn Pérez, et al.. Transcriptome Annotation using Tandem SAGE Tags. Nucleic Acids Research, 2007, 35 (17), pp.e108. ⟨10.1093/nar/gkm495⟩. ⟨lirmm-00193291⟩
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S. Robbens, Evelyne Derelle, C. Ferraz, J. Wuyts, H. Moreau, et al.. The Complete Chloroplast and Mitochondrial DNA Sequence of Ostreococcus tauri: Organelle Genomes of the Smallest Eukaryote are Examples of Compaction.. Molecular Biology and Evolution, 2007, 24 (4), pp.956-968. ⟨10.1093/molbev/msm012⟩. ⟨hal-00141854⟩
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Stéphane Roche, Félix A. Rey, Yves Gaudin, Stéphane Bressanelli. Structure of the prefusion form of the vesicular stomatitis virus glycoprotein G.. Science, 2007, 315 (5813), pp.843-8. ⟨10.1126/science.1135710⟩. ⟨hal-00167649⟩
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Sylvie Rouquier, D. Giorgi. Olfactory receptor gene repertoires in mammals. Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis, 2007, 616 (1-2), pp.95-102. ⟨10.1016/j.mrfmmm.2006.11.012⟩. ⟨hal-00133795⟩
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B. Schuettengruber, D. Chourrout, M. Vervoort, B. Leblanc, Giacomo Cavalli. Genome Regulation by Polycomb and Trithorax Proteins. Cell, 2007, 128 (4), pp.735-745. ⟨10.1016/j.cell.2007.02.009⟩. ⟨hal-00133797⟩
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R. Silverman, C. Bisbal. Diverse functions of RNase L and implications in pathology. Biochimie, 2007, 89 (6-7), pp.789-798. ⟨10.1016/j.biochi.2007.02.006⟩. ⟨hal-00167572⟩
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Audrey Sirvent, A. Boureux, V. Simon, C. Leroy, Serge Roche. The tyrosine kinase Abl is required for Src-transforming activity in mouse fibroblasts and human breast cancer cells.. Oncogene, 2007, 26 (52), pp.7313-7323. ⟨10.1038/sj.onc.1210543⟩. ⟨hal-00189107⟩
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N. Souraty, P. Noun, C. Djambas-Khayat, E. Chouery, A. Pangrazio, et al.. Molecular study of six families originating from the Middle-East and presenting with autosomal recessive osteopetrosis. European Journal of Medical Genetics, 2007, 50 (3), pp.188-199. ⟨10.1016/j.ejmg.2007.01.005⟩. ⟨hal-00149750⟩
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Christophe Terzian, Michel Henry, Andreas Meyerhans, Simon Wain-Hobson, Jean Pierre Vartanian. Induction of mutations in Drosophila melanogaster gypsy retroelements by modulation of intracellular deoxynucleoside triphosphate pools in vivo.. Journal of Virology, 2007, 81 (9), pp.4900-3. ⟨10.1128/JVI.02558-06⟩. ⟨hal-00167686⟩
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J. Torres-Rosell, G. de Piccoli, V. Cordon-Preciado, S. Farmer, A. Jarmuz, et al.. Anaphase onset before complete DNA replication with intact checkpoint responses. Science, 2007, 315 (5817), pp.1411-1415. ⟨10.1126/science.1134025⟩. ⟨hal-00138498⟩
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I. Touitou. REPLY. Arthritis and Rheumatism, 2007, 56 (11), pp.3880. ⟨hal-00185297⟩
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I. Touitou, B. Dumont, M. Pourtein, S. Perelman, A. Sirvent, et al.. Transmission of familial Mediterranean fever mutations following bone marrow transplantation.. Clinical Genetics, 2007, 72 (2), pp.162-163. ⟨10.1111/j.1399-0004.2007.00840.x⟩. ⟨hal-00167586⟩
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I. Touitou, I. Kone-Paut. Fièvres récurrentes héréditaires: diagnostic et traitement. Revue du Rhumatisme, 2007, 74, pp.783-789. ⟨hal-00322380⟩
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I. Touitou, T. Sarkisian, M. Medlej-Hashim, M. Tunca, A. Livneh, et al.. Country as the primary risk factor for renal amyloidosis in familial mediterranean fever. Arthritis and Rheumatism, 2007, 56 (6), pp.1706-1712. ⟨10.1002/art.22507⟩. ⟨hal-00148049⟩
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H. Tourriere, P. Pasero. Maintenance of fork integrity at damaged DNA and natural pause sites. DNA Repair, 2007, 6 (7), pp.900-913. ⟨10.1016/j.dnarep.2007.02.004⟩. ⟨hal-00160305⟩
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R. Triboulet, B. Mari, Yea-Lih Lin, C. Chable-Bessia, Y. Bennasser, et al.. Physiological suppression of microRNA-silencing pathway by HIV-1 during virus replication. Science, 2007, 315 (5818), pp.1579-1582. ⟨10.1126/science.1136319⟩. ⟨hal-00138482⟩
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R. Triboulet, M. Benkirane. Interplay between HIV-1 replication and the microRNA-silencing pathway.. Médecine/Sciences, 2007, 23 (6-7), pp.590-592. ⟨10.1051/medsci/20072367590⟩. ⟨hal-00167587⟩
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Ml Yeung, M. Benkirane, Kt Jeang. Small non-coding RNAs, mammalian cells, and viruses: regulatory interactions?. Retrovirology, 2007, 4 (1), pp.74. ⟨10.1186/1742-4690-4-74⟩. ⟨hal-00194073⟩
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E. Zuckerkandl, Giacomo Cavalli. Combinatorial epigenetics, "junk DNA", and the evolution of complex organisms.. Gene, 2007, 390, pp.232-242. ⟨10.1016/j.gene.2006.12.001⟩. ⟨hal-00191017⟩
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Journal articles

2006

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Re Abed, Ae Khechine, He Omri, S. Youssef, A. Laatiri, et al.. Chemiluminescent detection of clonal immunoglobulin and T cell receptor gene rearrangements in Tunisian lymphoid malignancies, leukemias and lymphomas.. Leukemia & lymphoma, 2006, 47, pp.1129-1137. ⟨10.1080/10428190600563250⟩. ⟨hal-00113400⟩
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Said Assou, Tal Anahory, Véronique Pantesco, Tanguy Le Carrour, Franck Pellestor, et al.. The human cumulus--oocyte complex gene-expression profile.. Human Reproduction, 2006, 21 (7), pp.1705-19. ⟨10.1093/humrep/del065⟩. ⟨inserm-00130809⟩
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Frederic Bantignies, Giacomo Cavalli. Cellular memory and dynamic regulation of polycomb group proteins. Current Opinion in Cell Biology, 2006, 18, pp.275-283. ⟨10.1016/j.ceb.2006.04.003⟩. ⟨hal-00069807⟩
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Thierry-Pascal Baum, Vivien Hierle, Nicolas Pasqual, Fatena Bellahcene, Denys Chaume, et al.. IMGT/GeneInfo: T cell receptor gamma TRG and delta TRD genes in database give access to all TR potential V(D)J recombinations.. BMC Bioinformatics, 2006, 7, pp.224. ⟨10.1186/1471-2105-7-224⟩. ⟨inserm-00000109⟩
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A. Benito, O. Gutierrez, C. Pipaon, Pj Real, F. Gachon, et al.. A novel role for Proline- and Acid-Rich Basic region Leucine Zipper (PAR bZIP) proteins in the transcriptional regulation of a BH3-only proapoptotic gene.. Journal of Biological Chemistry, 2006, 281, pp.38351-38357. ⟨10.1074/jbc.M607004200⟩. ⟨hal-00121656⟩
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Sèverine Bérard, François Nicolas, Jérome Buard, Olivier Gascuel, Eric Rivals. A Fast and Specific Alignment Method for Minisatellite Maps. Evolutionary Bioinformatics, 2006, 2, pp.327-344. ⟨10.1177/117693430600200025⟩. ⟨lirmm-00120145⟩
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D. Berthier, I. Chantal, S. Thevenon, J. Marti, D. Piquemal, et al.. Bovine Transcriptome Analysis by SAGE Technology during an Experimental Trypanosoma congolense Infection.. Annals of the New York Academy of Sciences, 2006, 1081, pp.286-299. ⟨10.1196/annals.1373.039⟩. ⟨hal-00122079⟩
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Sandrine Biau, Benoit Roig, Pascal de Santa Barbara. Action of Endocrine Disruptors in Urogenital Development in Chicken Embryo. Epidemiology, 2006, 17 (6), pp.S335. ⟨10.1097/00001648-200611001-00887⟩. ⟨hal-01663971⟩
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Annie Bibeau-Poirier, Simon-Pierre Gravel, Jean-François Clément, Sébastien Rolland, Geneviève Rodier, et al.. Involvement of the IκB Kinase (IKK)-Related Kinases Tank-Binding Kinase 1/IKKi and Cullin-Based Ubiquitin Ligases in IFN Regulatory Factor-3 Degradation. Journal of Immunology, 2006, 177 (8), pp.5059-5067. ⟨10.4049/jimmunol.177.8.5059⟩. ⟨hal-03101855⟩
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Kevin Bleakley, Véronique Giudicelli, Yan Wu, Marie-Paule Lefranc, Gérard Biau. IMGT standardization for statistical analyses of T cell receptor junctions: the TRAV-TRAJ example. In Silico Biology, 2006, 6 (6), pp.573-588. ⟨hal-00121667⟩
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Marie-Elisabeth Brun, Stéphan Gasca, Cyrille Girard, Katia Bouton, Bernard de Massy, et al.. Characterization and expression analysis during embryo development of the mouse ortholog of MLL3.. Gene, 2006, 371, pp.25-33. ⟨10.1016/j.gene.2005.11.013⟩. ⟨inserm-00130893⟩
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S. Buhler, A. Megarbane, G. Lefranc, Jm Tiercy, A. Sanchez-Mazas. The HLA-C molecular characterization of a lebanese population and an analysis of HLA-C genetic structure of 39 populations from Europe toIndia-Pakistan. Tissue Antigens, 2006, 68, pp.44-57. ⟨10.1111/j.1399-0039.2006.00621.x⟩. ⟨hal-00086427⟩
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Claudio Capelli, N. Redhead, V. Romano, F. Cali, G. Lefranc, et al.. Population structure in the Méditerranean basin: a Y chromosome perspective. Annals of Human Genetics, 2006, 70, pp.207-225. ⟨10.1111/j.1529-8817.2005.00224.x⟩. ⟨hal-00082362⟩
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Giacomo Cavalli. Chromatin and epigenetics in development: blending cellular memory with cell fate plasticity. Development (Cambridge, England), 2006, 133, pp.2089-2094. ⟨10.1242/dev.02402⟩. ⟨hal-00069805⟩
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C Cayrou, Yannick Doyon, Anne-Julie Landry, Valérie Côté, Jacques Côté. La mystification et l’ingéniosité de suppresseurs de tumeurs dans les fonctions nucléaires. Médecine/Sciences, 2006, 22 (11), pp.919-921. ⟨10.1051/medsci/20062211919⟩. ⟨hal-02154228⟩
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Sophie Charrasse, Franck Comunale, Yaël Grumbach, Francis Poulat, Anne Blangy, et al.. RhoA GTPase Regulates M-Cadherin Activity and Myoblast Fusion. Molecular Biology of the Cell, 2006, 17 (2), pp.749-759. ⟨10.1091/mbc.e05-04-0284⟩. ⟨hal-02385119⟩
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A. Chartier, B. Benoit, M. Simonelig. A Drosophila model of oculopharyngeal muscular dystrophy reveals intrinsic toxicity of PABPN1. EMBO Journal, 2006, 25, pp.2253-2262. ⟨10.1038/sj.emboj.7601117⟩. ⟨hal-00069833⟩
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Christophe Côme, Fabrice Magnino, Frédéric Bibeau, Pascal de Santa Barbara, Karl Friedrich Becker, et al.. Snail and slug play distinct roles during breast carcinoma progression.. Clinical Cancer Research, 2006, 12 (18), pp.5395-402. ⟨10.1158/1078-0432.CCR-06-0478⟩. ⟨inserm-00148369⟩
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I. Comet, E. Savitskaya, B. Schuettengruber, N. Negre, S. Lavrov, et al.. PRE-Mediated Bypass of Two Su(Hw) Insulators Targets PcG Proteins to a Downstream Promoter.. Developmental Cell, 2006, 11, pp.117-124. ⟨10.1016/j.devcel.2006.05.009⟩. ⟨hal-00086918⟩
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C. Cordier, A. Bencsik, S. Philippe, D. Betemps, F. Ronzon, et al.. Transmission and characterization of bovine spongiform encephalopathy sources in two ovine transgenic mouse lines (TgOvPrP4 and TgOvPrP59).. Journal of General Virology, 2006, 87 (Pt 12), pp.3763-3771. ⟨10.1099/vir.0.82062-0⟩. ⟨hal-00180823⟩
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Bertrand Cosson, Carole Gautier-Courteille, Dominique Maniey, Ounissa Aït-Ahmed, Michelle Lesimple, et al.. Oligomerization of EDEN-BP is required for specific mRNA deadenylation and binding.. Biology of the Cell, 2006, 98 (11), pp.653-65. ⟨10.1042/BC20060054⟩. ⟨hal-00307733⟩
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C. Crozet, J. Vezilier, V. Delfieu, T. Nishimura, T. Onodera, et al.. The truncated 23-230 form of the prion protein localizes to the nuclei of inducible cell lines independently of its nuclear localization signals and is not cytotoxic.. Molecular and Cellular Neuroscience, 2006, 32, pp.315-323. ⟨10.1016/j.mcn.2006.05.004⟩. ⟨hal-00113402⟩
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Olivier Cuvier, Malik Lutzmann, Marcel Méchali. ORC is necessary at the interphase-to-mitosis transition to recruit cdc2 kinase and disassemble RPA foci. Current Biology, 2006, 16 (5), pp.516-523. ⟨10.1016/j.cub.2006.01.059⟩. ⟨hal-00069830⟩
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Grégoire David, K. Brodolin, M. Mechali. HoxB domain induction silences DNA replication origins in the locus and specifies a single origin at its boundary.. EMBO Reports, 2006, 7, pp.812-816. ⟨10.1038/sj.embor.7400758⟩. ⟨hal-00113404⟩
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K. Delaval, A. Wagschal, Robert Feil. Epigenetic deregulation of imprinting in congenital diseases of aberrant growth. BioEssays, 2006, 28 (5), pp.453--9. ⟨10.1002/bies.20407⟩. ⟨hal-02262456⟩
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Af Roux, V. Faugere, S. Le Guedard, N. Pallares Ruiz, A. Vielle, et al.. Survey of the frequency of USH1 gene mutations in a cohort of Usher patients shows the importance of cadherin 23 and protocadherin 15 genes and establishes a detection rate of above 90%.. Journal of Medical Genetics, 2006, 43, pp.763-768. ⟨10.1136/jmg.2006.041954⟩. ⟨hal-00113441⟩
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M. Rozenbaum, I. Touitou, E. Portnoy, S. Morkos, I. Rosner. A molecular basis for the absence of familial Mediterranean fever in Ethiopian Jews.. Clinical and experimental rheumatology, 2006, 24, pp.s127. ⟨hal-00113445⟩
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Cannavo S, Almoto B, Cavalli G, Squadrito S, Romanello G, et al.. Acromegaly and coronary disease: an integrated evaluation of conventional coronary risk factors and coronary calcifications detected by computed tomography. Journal of Clinical Endocrinology and Metabolism, 2006, 91 (10), pp.3766-3772. ⟨10.1210/jc.2005-2857⟩. ⟨hal-00113050⟩
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Jw Semple, Lf da Silva, Ej Jervis, J. Ah Kee, H. Al Attar, et al.. An essential role for Orc6 in DNA replication through maintenance of pre-replicative complexes.. EMBO Journal, 2006, 25, pp.5150-5158. ⟨10.1038/sj.emboj.7601391⟩. ⟨hal-00113452⟩
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Xiaobing Shi, Tao Hong, Kay Walter, Mark Ewalt, Eriko Michishita, et al.. ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression. Nature, 2006, 442 (7098), pp.96-99. ⟨10.1038/nature04835⟩. ⟨hal-02154247⟩
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T. Soussi, B. Asselain, D. Hamroun, S. Kato, C. Ishioka, et al.. Meta-analysis of the p53 mutation database for mutant p53 biological activity reveals a methodologic bias in mutation detection.. Clinical Cancer Research, 2006, 12, pp.62-69. ⟨10.1158/1078-0432.CCR-05-0413⟩. ⟨hal-00018575⟩
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T. Soussi, C. Ishioka, M. Claustres, Christophe Béroud. Locus-specific mutation databases: pitfalls and good practice based on the p53 experience. Nature Reviews Cancer, 2006, 6, pp.83-90. ⟨10.1038/nrc1783⟩. ⟨hal-00018573⟩
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I. Szivak, Ned J. Lamb, Lm Heilmeyer. Subcellular localization and structural function of endogenous phosphorylated phosphatidylinosital 4-kinase (p14k92).. Journal of Biological Chemistry, 2006, 281 (24), pp.16740-16749. ⟨10.1074/jbc.M511645200⟩. ⟨hal-00113456⟩
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Magali Taulan, F. Paquet, A. Argiles, J. Demaille, Mc Romey. Comprehensive analysis of the renal transcriptional response to acute uranyl nitrate exposure.. BMC Genomics, 2006, 7, pp.2. ⟨10.1186/1471-2164-7-2⟩. ⟨hal-00069847⟩
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I. Touitou, C. Perez, B. Dumont, L. Federici, C. Jorgensen. Refractory auto-inflammatory syndrome associated with digenic transmission of low-penetrance tumour necrosis factor receptor-associated periodic syndrome and cryopyrin-associated periodic syndrome mutations.. Annals of the Rheumatic Diseases, 2006, 65, pp.1530-1531. ⟨10.1136/ard.2006.054312⟩. ⟨hal-00113462⟩
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C. Treand, I. Du Chesne, V. Bres, Rosemary Kiernan, R. Benarous, et al.. Requirement for SWI/SNF chromatin-remodeling complex in Tat-mediated activation of the HIV-1 promoter. EMBO Journal, 2006, 25, pp.1690-1699. ⟨10.1038/sj.emboj.7601074⟩. ⟨hal-00069407⟩
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S. Varsamos, B. Xuereb, T. Commes, G. Flick, C. Spanings-Pierrot. Pituitary hormone mRNA expression in European sea bass Dicentrarchus labrax in seawater and following acclimation to fresh water.. Journal of Endocrinology, 2006, 191 (2), pp.473-480. ⟨10.1677/joe.1.06847⟩. ⟨hal-00122086⟩
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A. Vicart, T. Lefebvre, J. Imbert, Arnaud Fernandez, B. Kahn-Perlès. Increased SP1 overall chromatin recruitment in divising cells by coordinated PP2A-mediated dephosphorylation. Journal of Molecular Biology, 2006, 364, pp.897-908. ⟨10.1016/j.jmb.2006.09.036⟩. ⟨hal-00118450⟩
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T. Vincent, P. Portales, V. Baillat, A. Eden, J. Clot, et al.. The immunological response to highly active antiretroviral therapy is linked to CD4+ T-cell surface CCR5 density. Journal of Acquired Immune Deficiency Syndromes - JAIDS, 2006, 43 (3), pp.377-378. ⟨10.1097/01.qai.0000234088.64655.45⟩. ⟨hal-00119764⟩
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A. Wagschal, Robert Feil. Genomic imprinting in the placenta. Cytogenetic and Genome Research, 2006, 113 (1-4), pp.90--8. ⟨10.1159/000090819⟩. ⟨hal-02262474⟩
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S. Zaessinger, I. Busseau, M. Simonelig. Oskar allows nanos mRNA translation in Drosophila embryos by preventing its deadenylation by Smaug/CCR4.. Development (Cambridge, England), 2006, 133, pp.4573-4583. ⟨10.1242/dev.02649⟩. ⟨hal-00113464⟩
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Journal articles

2005

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Can Alkan, Eray Tüzün, Jerome Buard, Franck Lethiec, Evan E. Eichler, et al.. Manipulating multiple sequence alignments via MaM and WebMaM. Nucleic Acids Research, 2005, 33 (Suppl. 2), pp.W295-W298. ⟨10.1093/nar/gki406⟩. ⟨lirmm-00105360⟩
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Tal Anahory, S. Hamamah, Brigitte Andreo, Bernard Hedon, Mireille Claustres, et al.. Sperm segregation analysis of a (13;22) Robertsonian translocation carrier by FISH: a comparison of locus specific probe and whole chromosome painting. Human Reproduction, 2005, 20, pp.1850-1854. ⟨10.1093/humrep/deh886⟩. ⟨hal-00016527⟩
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E. Bachrach, H. Dreja, Y. L. Lin, C. Mettling, V. Pinet, et al.. Effects of virion surface gp120 density on infection by HIV-1 and viral production by infected cells. Virology, 2005, 332 (1), pp.418--29. ⟨10.1016/j.virol.2004.11.031⟩. ⟨hal-02262222⟩
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S. Badiou, H. Bellet, S. Lehmann, Jp Cristol, S. Jaber. Elevated plasma cysteinylglicine levels caused by cilastatin-associated antibiotic treatment.. Clinical Chemistry, 2005, 43, pp.332-334. ⟨10.1515/CCLM.2005.057⟩. ⟨hal-00014265⟩
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Wagane J. Benga, Sylvie Grandemange, George V. Shpakovski, Elena K. Shematorova, Claude Kedinger, et al.. Distinct regions of RPB11 are required for heterodimerization with RPB3 in human and yeast RNA polymerase II. Nucleic Acids Research, 2005, 33 (11), pp.3582-3590. ⟨10.1093/nar/gki672⟩. ⟨hal-02981340⟩
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Y. Bennasser, Sy Le, M. Benkirane, Kt Jeang. Evidence that HIV-1 encodes an siRNA and a suppressor of RNA silencing. Immunity, 2005, 22, pp.607-619. ⟨10.1016/j.immuni.2005.03.010⟩. ⟨hal-00016528⟩
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B. Benoit, G. Mitou, A. Chartier, C. Temme, S. Zaessinger, et al.. An essential cytoplasmic function for the nuclear poly(A) binding protein, PABP2, in poly(A) tail length control and early development in drosophila. Developmental Cell, 2005, 9, pp.511-522. ⟨10.1016/j.devcel.2005.09.002⟩. ⟨hal-00016529⟩
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Edwige Col, Cécile Caron, Christine Chable-Bessia, Gaëlle Legube, Sylvie Gazzeri, et al.. HIV-1 Tat targets Tip60 to impair the apoptotic cell response to genotoxic stresses. EMBO Journal, 2005, 24 (14), pp.2634-2645. ⟨10.1038/sj.emboj.7600734⟩. ⟨hal-02345600⟩
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Xavier Contreras, Yamina Bennasser, Nathalie Chazal, Marc Moreau, Catherine Leclerc, et al.. Human immunodeficiency virus type 1 Tat protein induces an intracellular calcium increase in human monocytes that requires DHP receptors: involvement in TNF-alpha production. Virology, 2005, 332 (1), pp.316-328. ⟨10.1016/j.virol.2004.11.032⟩. ⟨hal-02147204⟩
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Sarrauste de Menthiere C, M. Adenot, A. Kervran, G. Grassy. Peptide dynamic fingerprints: a tool for investigating the role of conformational flexibility for GLP-1 analogs affinity. Journal of Peptide Science, 2005, 11, pp.463-471. ⟨10.1002/psc.636⟩. ⟨hal-00018649⟩
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Pascal de Santa Barbara, Jerrell Williams, Allan M. Goldstein, Adele M. Doyle, Corinne M. Nielsen, et al.. Bone morphogenetic protein signaling pathway plays multiple roles during gastrointestinal tract development.. Developmental Dynamics, 2005, 234 (2), pp.312-22. ⟨10.1002/dvdy.20554⟩. ⟨inserm-00287632⟩
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Jérôme Déjardin, Aurélien Rappailles, Olivier Cuvier, Charlotte Grimaud, Martine Decoville, et al.. Recruitment of Drosophila Polycomb group proteins to chromatin by DSP1. Nature, 2005, 434 (7032), pp.533-538. ⟨10.1038/nature03386⟩. ⟨hal-00088540⟩
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Jérôme Déjardin, Aurélien Rappailles, Olivier Cuvier, Charlotte Grimaud, Martine Decoville, et al.. Recruitment of Drosophila Polycomb group proteins to chromatin by DSP1. Nature, 2005, 434 (7032), pp.533-538. ⟨10.1038/nature03386⟩. ⟨hal-04853924⟩
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J. Dejardin, Giacomo Cavalli. Recruitment of Drosophila Polycomb group proteins to chromatin by DSP1. Médecine/Sciences, 2005, 21, pp.689-691. ⟨10.1038/nature03386⟩. ⟨hal-00016621⟩
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Lucile Espert, Geneviève Degols, Yea-Lih Lin, Thierry Vincent, Monsef Benkirane, et al.. Interferon-induced exonuclease ISG20 exhibits an antiviral activity against human immunodeficiency virus type 1. Journal of General Virology, 2005, 86 (8), pp.2221-2229. ⟨10.1099/vir.0.81074-0⟩. ⟨hal-02354076⟩
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A. Frigoul, Lefranc M.-P.. MICA: standardized IMGT allele nomenclature, polymorphisms and diseases.. Recent Research Developments in Genetics, 2005, 3, pp.95-145. ⟨hal-00018618⟩
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N. Gilbert, S. Lutz, Ta Morrish, Jv Moran. Multiple Fates of L1 retrotransposition intermediates in cultured human cells. Molecular and Cellular Biology, 2005, 25, pp.7780-7795. ⟨10.1128/MCB.25.17.7780-7795.2005⟩. ⟨hal-00016573⟩
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H. Guillon, Frédéric Baudat, C. Grey, R. Liskay, Bernard de Massy. Crossover and noncrossover pathways in mouse meiosis. Molecular Cell, 2005, 20, pp.563-573. ⟨10.1016/j.molcel.2005.09.021⟩. ⟨hal-00016609⟩
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Dalil Hamroun, Christophe Béroud, Bertrand Fontaine, Jean-Claude Kaplan. Introducing the online version of the gene table for neuromuscular disease (nuclear genes only). Neuromuscular Disorders, 2005, 15 (1), pp.88. ⟨10.1016/j.nmd.2004.12.002⟩. ⟨hal-01682203⟩
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Philippe Jay, P. Berta, Philippe Blache. Expression of the carcinoembryonic antigen gene is inhibited by SOX9 in human colon carcinoma cells. Cancer Research, 2005, 65, pp.2193-2198. ⟨10.1158/0008-5472.CAN-04-1484⟩. ⟨hal-00017040⟩
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P. Khau van Kien, Fabrice Mathieu, L. Zhu, Alain Lalande, C. Betard, et al.. Mapping of familial thoracic aortic aneurysm dissection with patent ductus arteriosus to 16p12-p13. Circulation, 2005, 112, pp.200-206. ⟨10.1161/CIRCULATIONAHA.104.506345⟩. ⟨hal-00016613⟩
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E. Laffly, L. Danjou, F. Condemine, D. Vidal, E. Drouet, et al.. Selection of a macaque Fab with human-like framework regions, high affinity, and that neutrlizes the protective antigen(PA) of Bacillus anthracis. Antimicrobial Agents and Chemotherapy, 2005, 49, pp.3414-3420. ⟨10.1128/AAC.49.8.3414-3420.2005⟩. ⟨hal-00016574⟩
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N. Lalevee, M. C. Rebsamen, S. Barrere-Lemaire, E. Perrier, Joël Nargeot, et al.. Aldosterone increases T-type calcium channel expression and in vitro beating frequency in neonatal rat cardiomyocytes. Cardiovascular Research, 2005, 67 (2), pp.216-224. ⟨10.1016/j.cardiores.2005.05.009⟩. ⟨hal-00117252⟩
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I. Lassot, E. Estrabaud, S. Emiliani, M. Benkirane, R. Benarous, et al.. p300 modulates ATF4 stability and transcriptional activity independently of its acetyltransferase domain. Journal of Biological Chemistry, 2005, 280, pp.41537-41545. ⟨10.1074/jbc.M505294200⟩. ⟨hal-00016619⟩
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Marie-Paule Lefranc, Olivier Clément, Quentin Kaas, Elodie Duprat, Patrick Chastellan, et al.. IMGT-Choreography for immunogenetics and immunoinformatics.. In Silico Biology, 2005, 5 (1), pp.45-60. ⟨hal-04096083⟩
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Marie-Paule Lefranc, Véronique Giudicelli, Quentin Kaas, Élodie Duprat, Joumana Jabado-Michaloud, et al.. IMGT, the international ImMunoGeneTics information system®. Nucleic Acids Research, 2005, 33 (Suppl 1), pp.D593-D597. ⟨10.1093/nar/gki065⟩. ⟨hal-00018647⟩
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Marie Paule Lefranc. IMGT, the international ImMunoGeneTics information system®: a standardized approach for immunogenetics and immunoinformatics. Immunome Research, 2005, 1, pp.1, 3, 10.1186/1745-7580-1-3. ⟨10.1186/1745-7580-1-3⟩. ⟨hal-00018648⟩
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M. Lutzmann, D. Maiorano, M. Mechali. Identification of full genes and proteins of MCM9, a novel, vertebrate-specific member of the MCM2-8 protein family. Gene, 2005, 362, pp.51-56. ⟨10.1016/j.gene.2005.07.031⟩. ⟨hal-00016610⟩
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Lefranc M.-P., E. Duprat, Q. Kaas, M. Tranne, A. Thiriot, et al.. IMGT unique numbering for MHC groove G-DOMAIN and MHC superfamily (MhcSF) G-LIKE-DOMAIN. Developmental and Comparative Immunology, 2005, 29, pp.917-938. ⟨10.1016/j.dci.2005.03.003⟩. ⟨hal-00018645⟩
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A. Marie Dupuy, S. Lehmann, J. Paul Cristol. Protein biochip systems for the clinical laboratory. Clinical Chemistry and Laboratory Medicine, 2005, 43, pp.1291-1302. ⟨10.1515/CCLM.2005.223⟩. ⟨hal-00016569⟩
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C. Moali, B. Font, Florence Ruggiero, D. Eichenberger, P. Rousselle, et al.. Substrate-specific modulation of a multi-substrate proteinase. C-terminal processing of fibrillar procollagens is the only bmp-1 dependent activity to be enhanced by PCPE-1. Journal of Biological Chemistry, 2005, 280 (25), pp.24188-24194. ⟨10.1074/jbc.M501486200⟩. ⟨hal-00014264⟩
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S. Nef, O. Shaad, Nr Stallings, Cr Cederroth, Jl Pitetti, et al.. Gene expression during sex determination reveals a robust female genetic program at the onset of ovarian development. Developmental Biology, 2005, 287, pp.361-377. ⟨10.1016/j.ydbio.2005.09.008⟩. ⟨hal-00016568⟩
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Karine Nguyen, Guillaume Bassez, Rafaelle Bernard, Martin Krahn, Véronique Labelle, et al.. Dysferlin mutations in LGMD2B, Miyoshi myopathy, and atypical dysferlinopathies. Human Mutation, 2005, 26 (2), pp.165 - 165. ⟨10.1002/humu.9355⟩. ⟨hal-01681874⟩
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J. Oliva, S. El Messaoudi, F. Pellestor, M. Fuentes, V. Georget, et al.. Involvement of HP1 alpha protein in irreversible transcriptional inactivation by antiestrogens in breast cancer cells. FEBS Letters, 2005, 579, pp.4278-4286. ⟨10.1016/j.febslet.2005.06.060⟩. ⟨hal-00016567⟩
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F. Pellestor, Brigitte Andreo, Tal Anahory, H. Dechaud, B. Hedon, et al.. Cytogénétique des ovocytes humains: 40 ans de progrès. Gynécologie Obstétrique & Fertilité, 2005, 33, pp.283-292. ⟨10.1016/j.gyobfe.2005.04.003⟩. ⟨hal-00016566⟩
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F. Pellestor, P. Paulasova, M. Macek, S. Hamamah. Les PNAs (peptide nucleic acids) : des sondes "high-tech" pour l'analyse génétique et cytogénétique moléculaire. Médecine/Sciences, 2005, 21, pp.753-758. ⟨10.1051/medsci/2005218-9753⟩. ⟨hal-00016565⟩
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Alain Pinton, T. Faraut, M. Yerle, J. Gruand, F. Pellestor, et al.. Comparison of male and female meiotic segregation patterns in translocation heterozygotes: a case study in an animal model (Sus scrofa domestice L.). Human Reproduction, 2005, 20, pp.2476-2482. ⟨10.1093/humrep/dei067⟩. ⟨hal-00016563⟩
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Céline René, Florence Iral, Magali Taulan, Julien Doudement, Aurore L'Honoré, et al.. Binding of Serum Response Factor to Cystic Fibrosis Transmembrane Conductance regulator CArG-like elements, as a new potential CFTR transcriptional regulator pathway. Nucleic Acids Research, 2005, 33 (16), pp.5271-5290. ⟨10.1093/nar/gki837⟩. ⟨hal-00014262⟩
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Geneviève Rodier, Constantin Makris, Philippe Coulombe, Anthony Scime, Keiko Nakayama, et al.. p107 inhibits G1 to S phase progression by down-regulating expression of the F-box protein Skp2. Journal of Cell Biology, 2005, 168 (1), pp.55-66. ⟨10.1083/jcb.200404146⟩. ⟨hal-03101824⟩
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Jean-Michel Saffin, Magali Venoux, Claude Prigent, Julien Espeut, Francis Poulat, et al.. ASAP, a human microtubule-associated protein required for bipolar spindle assembly and cytokinesis.. Proceedings of the National Academy of Sciences of the United States of America, 2005, 102 (32), pp.11302-7. ⟨10.1073/pnas.0500964102⟩. ⟨inserm-00966570⟩
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M. Seleme, Olivier Disson, Stéphanie Robin, Christine Brun, Danielle Teninges, et al.. In vivo RNA localization of I factor, a non-LTR retrotransposon, requires a cis-acting signal in ORF2 and ORF1 protein. Nucleic Acids Research, 2005, 33 (2), pp.776-785. ⟨10.1093/nar/gki221⟩. ⟨hal-04176712⟩
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E. Smith, C Cayrou, R. Huang, W. Lane, J. Côté, et al.. A Human Protein Complex Homologous to the Drosophila MSL Complex Is Responsible for the Majority of Histone H4 Acetylation at Lysine 16. Molecular and Cellular Biology, 2005, 25 (21), pp.9175-9188. ⟨10.1128/mcb.25.21.9175-9188.2005⟩. ⟨hal-02154288⟩
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L. Thevenet, Kh Albrecht, S. Malki, P. Berta, B. Boizet-Bouhoure, et al.. NHERF2/SIP 1 interacts with mouse SRY via a different mechanism than human SRY. Journal of Biological Chemistry, 2005, 280, pp.38625-38630. ⟨10.1074/jbc.M504127200⟩. ⟨hal-00016561⟩
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H. Tourriere, G. Versini, V. Cordon-Preciado, C. Alabert, P. Pasero. Mrc1 and Tof1 promote replication fork progression and recovery independently of Rad53. Molecular Cell, 2005, 19, pp.699-706. ⟨10.1016/j.molcel.2005.07.028⟩. ⟨hal-00016559⟩
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L. Zekri, K. Chebli, H. Tourriere, F. C. Nielsen, T. V. Hansen, et al.. Control of fetal growth and neonatal survival by the RasGAP-associated endoribonuclease G3BP. Molecular and Cellular Biology, 2005, 25 (19), pp.8703--16. ⟨10.1128/MCB.25.19.8703-8716.2005⟩. ⟨hal-02262241⟩
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Journal articles

2004

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Philippe Blache, Marc van de Wetering, Isabelle Duluc, Claire Domon, Philippe Berta, et al.. SOX9 is an intestine crypt transcription factor, is regulated by the Wnt pathway, and represses the CDX2 and MUC2 genes.. Journal of Cell Biology, 2004, 166 (1), pp.37-47. ⟨10.1083/jcb.200311021⟩. ⟨hal-00266987⟩
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Séverine Boulon, Céline Verheggen, Beáta E Jády, Cyrille Girard, Christina Begon-Pescia, et al.. PHAX and CRM1 are required sequentially to transport U3 snoRNA to nucleoli. Molecular Cell, 2004, 16 (5), pp.777-787. ⟨10.1016/j.molcel.2004.11.013⟩. ⟨hal-00022377⟩
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C. Cande, N. Vahsen, D. Metivier, H. Tourriere, K. Chebli, et al.. Regulation of cytoplasmic stress granules by apoptosis-inducing factor. Journal of Cell Science, 2004, 117 (19), pp.4461--4468. ⟨10.1242/jcs.01356⟩. ⟨hal-02262401⟩
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Séverine Chambeyron, Wendy Bickmore. Does looping and clustering in the nucleus regulate gene expression?. Current Opinion in Cell Biology, 2004, 16 (3), pp.256-262. ⟨10.1016/j.ceb.2004.03.004⟩. ⟨hal-03066799⟩
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Carole Crozet, Yea-Lih Lin, Clément Mettling, Chantal Mourton-Gilles, Pierre Corbeau, et al.. Inhibition of PrPSc formation by lentiviral gene transfer of PrP containing dominant negative mutations.. Journal of Cell Science, 2004, 117 (Pt 23), pp.5591-7. ⟨10.1242/jcs.01484⟩. ⟨inserm-00143203⟩
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J. Delaunay. The Drosophila Bruno paralogue Bru-3 specifically binds the EDEN translational repression element. Nucleic Acids Research, 2004, 32 (10), pp.3070-3082. ⟨10.1093/nar/gkh627⟩. ⟨hal-02884248⟩
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Marie-Antoinette Di Forte-Poisson, M. Magis, Maurice Tordjman, Raphaël Aubry, Nicolas Sarazin, et al.. LP-MOCVD growth of GaAlN/GaN heterostructures on silicon carbide. Application to HEMT's devices. Journal of Crystal Growth, 2004, 272 (1-4), pp.305-311. ⟨10.1016/j.jcrysgro.2004.08.121⟩. ⟨hal-00141957⟩
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Isabelle Gaillard, Sylvie Rouquier, Alain Chavanieu, Patrice Mollard, Dominique Giorgi. Amino-acid changes acquired during evolution by olfactory receptor 912-93 modify the specificity of odorant recognition. Human Molecular Genetics, 2004, 13 (7), pp.771-780. ⟨10.1093/hmg/ddh086⟩. ⟨hal-02948400⟩
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Isabelle Gaillard, Sylvie Rouquier, Dominique Giorgi. Olfactory receptors. Cellular and Molecular Life Sciences, In press, 61 (4), pp.456-469. ⟨10.1007/s00018-003-3273-7⟩. ⟨hal-02948424⟩
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L. Garrigue-Antar, V. François, K.E. Kadler. Deletion of epidermal growth factor-like domains converts mammalian tolloid into a chordinase and effective procollagen c-proteinase. Biological Chemistry, 2004, 279, pp.49835-49841. ⟨10.1074/jbc.M408134200⟩. ⟨hal-00022200⟩
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Nicolas Gilbert, Alain Bucheton, Aurélien J. Doucet. Instabilité génomique associée à la rétrotransposition du LINE-1 humain. Journal de la Société de Biologie, 2004, 198 (4), pp.419-424. ⟨10.1051/jbio/2004198040419⟩. ⟨hal-04943630⟩
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Véronique Gire, Pierre Roux, David Wynford-Thomas, Jean-Marc Brondello, Vjekoslav Dulic. DNA damage checkpoint kinase Chk2 triggers replicative senescence. EMBO Journal, 2004, 23 (13), pp.2554-2563. ⟨10.1038/sj.emboj.7600259⟩. ⟨hal-03763012⟩
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Véronique Giudicelli, Denys Chaume, Marie-Paule Lefranc. IMGT/V-QUEST, an integrated software program for immunoglobulin and T cell receptor V-J and V-D-J rearrangement analysis. Nucleic Acids Research, 2004, 32 (Web Server), pp.W435-W440. ⟨10.1093/nar/gkh412⟩. ⟨hal-04220076⟩
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Véronique Giudicelli, Denys Chaume, Marie-Paule Lefranc. IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes.. Nucleic Acids Research, 2004, 33 (Suppl 1), pp.D256-D261. ⟨10.1093/nar/gki010⟩. ⟨hal-04220055⟩
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Dalila D. Laoudj-Chenivesse, Gilles Carnac, Catherine Bisbal, Gerald Hugon, Sandrine Bouillot, et al.. Increased levels of adenine nucleotide translocator 1 protein and response to oxidative stress are early events in facioscapulohumeral muscular dystrophy muscle. Journal of Molecular Medicine, 2004, 83 (3), pp.216-224. ⟨10.1007/s00109-004-0583-7⟩. ⟨hal-03821150⟩
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Marie-Paule Lefranc, Véronique Giudicelli, Chantal Ginestoux, Nathalie Bosc, Géraldine Folch, et al.. IMGT-ONTOLOGY for Immunogenetics and Immunoinformatics. In Silico Biology, 2004, 4 (1), pp.17-29. ⟨lirmm-00269825⟩
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Jean-Marc Lemaitre, Stéphane S. Bocquet, Marie-Emilie Terret, Mandana Namdar, Ounissa Ait-Ahmed, et al.. The regulation of competence to replicate in meiosis by Cdc6 is conserved during evolution. Molecular Reproduction and Development, 2004, 69 (1), pp.94-100. ⟨10.1002/mrd.20153⟩. ⟨hal-02107195⟩
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Jean-Charles Maillard, David Berthier, Sophie Thevenon, Ronan Quéré, David Piquemal, et al.. Use of the Serial Analysis of Gene Expression (SAGE) Method in Veterinary Research: A Concrete Application in the Study of the Bovine Trypanotolerance Genetic Control. Annals of the New York Academy of Sciences, 2004, 1026 (1), pp.171-182. ⟨10.1196/annals.1307.026⟩. ⟨hal-02867268⟩
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Laurent Manchon, R. Quere. Mining SAGE data allows large-scale, sensitive screening of antisense transcript expression. Nucleic Acids Research, 2004, 32 (20), pp.e163-e163. ⟨10.1093/nar/gnh161⟩. ⟨hal-02867267⟩
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Marcel Méchali, Kazumasa Yoshida, Philippe Pasero, Philippe Coulombe, Geneviève Rodier, et al.. N-Terminal Ubiquitination of Extracellular Signal-Regulated Kinase 3 and p21 Directs Their Degradation by the Proteasome. Molecular and Cellular Biology, 2004, 24 (14), pp.6140-6150. ⟨10.1128/MCB.24.14.6140-6150.2004⟩. ⟨hal-03101868⟩
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Takeshi Mizuguchi, Gwenaëlle Collod-Beroud, Takushi Akiyama, Marianne Abifadel, Naoki Harada, et al.. Heterozygous TGFBR2 mutations in Marfan syndrome.. Nature Genetics, 2004, 36 (8), pp.855-60. ⟨10.1038/ng1392⟩. ⟨inserm-00143367v2⟩
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Brigitte Moniot, Sandrine Biau, Sandrine Faure, Corinne M. Nielsen, Philippe Berta, et al.. SOX9 specifies the pyloric sphincter epithelium through mesenchymal-epithelial signals.. Development (Cambridge, England), 2004, 131 (15), pp.3795-804. ⟨10.1242/dev.01259⟩. ⟨inserm-00287635⟩
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Jean-Marie Peloponese, Hidekatsu Iha, Venkat Yedavalli, Akiko Miyazato, Yan Li, et al.. Ubiquitination of Human T-Cell Leukemia Virus Type 1 Tax Modulates Its Activity. Journal of Virology, 2004, 78 (21), pp.11686-11695. ⟨10.1128/JVI.78.21.11686-11695.2004⟩. ⟨hal-02137895⟩
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Véronique Perrier, Jérôme Solassol, Carole Crozet, Yveline Frobert, Chantal Mourton-Gilles, et al.. Anti-PrP antibodies block PrPSc replication in prion-infected cell cultures by accelerating PrPC degradation.. Journal of Neurochemistry, 2004, 89 (2), pp.454-63. ⟨10.1111/j.1471-4159.2004.02356.x⟩. ⟨inserm-00143226⟩
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Laurent Perrin, J.-M. Dura. Molecular genetics of the Alhambra ( Drosophila AF10) complex locus of Drosophila. Molecular Genetics and Genomics, 2004, 272 (2), ⟨10.1007/s00438-004-1042-4⟩. ⟨hal-01619093⟩
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Jean-Philippe Ral, Evelyne Derelle, Conchita Ferraz, Fabrice Wattebled, Benoit Farinas, et al.. Starch Division and Partitioning. A Mechanism for Granule Propagation and Maintenance in the Picophytoplanktonic Green Alga Ostreococcus tauri. Plant Physiology, 2004, 136, pp.333-3340. ⟨10.1104/pp.104.044131⟩. ⟨hal-00085499⟩
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Magali Taulan, F. Paquet, C. Maubert, O. Delissen, J. Demaille, et al.. Renal toxicogenomic response to chronic uranyl nitrate insult in mice. Environmental Health Perspectives, 2004, 112 (16), pp.1628-1635. ⟨10.1289/txg.7296⟩. ⟨hal-03048060⟩
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T. Vincent, Nadir Mechti. IL-6 regulates CD44 cell surface expression on human myeloma cells. Leukemia, 2004, 18 (5), pp.967-975. ⟨10.1038/sj.leu.2403333⟩. ⟨hal-02354122⟩
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Mylene Weill, Arnaud Berthomieu, Claire Berticat, Georges Lutfalla, Vincent Negre, et al.. Insecticide resistance: a silent base prediction. Current Biology, 2004, 14 (14), pp.R552-R553. ⟨10.1016/j.cub.2004.07.008⟩. ⟨hal-01946061⟩
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Mehdi Yousfi-Monod, Véronique Giudicelli, Denys Chaume, Marie-Paule Lefranc. IMGT/V-QUEST: the highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis.. Bioinformatics, 2004, 20 (Suppl. 1), pp.I379-I385. ⟨10.1093/bioinformatics/bth945⟩. ⟨lirmm-00108578⟩
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2003

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Jean-Baptiste Andrault, Isabelle Gaillard, Dominique Giorgi, Sylvie Rouquier. Expansion of the BPI family by duplication on human chromosome 20: characterization of the RY gene cluster in 20q11.21 encoding olfactory transporters/antimicrobial-like peptides☆. Genomics, 2003, 82 (2), pp.172-184. ⟨10.1016/S0888-7543(03)00102-2⟩. ⟨hal-02948435⟩
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J. Basbous, A. Bazarbachi, C. Granier, C. Devaux, J.-M. Mesnard. The Central Region of Human T-Cell Leukemia Virus Type 1 Tax Protein Contains Distinct Domains Involved in Subunit Dimerization. Journal of Virology, 2003, 77 (24), pp.13028-13035. ⟨10.1128/jvi.77.24.13028-13035.2003⟩. ⟨hal-02376660⟩
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Fabienne Baus, Véronique Gire, Daniel Fisher, Jacques Piette, Vjekoslav Dulic. Permanent cell cycle exit in G2 phase after DNA damage in normal human fibroblasts. EMBO Journal, 2003, 22 (15), pp.3992-4002. ⟨10.1093/emboj/cdg387⟩. ⟨hal-03763240⟩
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Vanessa Brès, Rosemary Kiernan, Laetitia Linares, Christine Chable-Bessia, Olga Plechakova, et al.. A non-proteolytic role for ubiquitin in Tat-mediated transactivation of the HIV-1 promoter. Nature Cell Biology, 2003, 5 (8), pp.754-761. ⟨10.1038/ncb1023⟩. ⟨hal-02137972⟩
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Elizabeth A. Carroll, Dianne Gerrelli, Stéphan Gasca, Elizabeth Berg, David R Beier, et al.. Cordon-bleu is a conserved gene involved in neural tube formation.. Developmental Biology, 2003, 262, pp.16-31. ⟨10.1016/s0012-1606(03)00323-3⟩. ⟨inserm-00130806⟩
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Philippe Coulombe, Geneviève Rodier, Stéphane Pelletier, Johanne Pellerin, Sylvain Meloche. Rapid Turnover of Extracellular Signal-Regulated Kinase 3 by the Ubiquitin-Proteasome Pathway Defines a Novel Paradigm of Mitogen-Activated Protein Kinase Regulation during Cellular Differentiation. Molecular and Cellular Biology, 2003, 23 (13), pp.4542-4558. ⟨10.1128/MCB.23.13.4542-4558.2003⟩. ⟨hal-03101875⟩
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Pascal de Santa Barbara, Gijs R. van den Brink, Drucilla J. Roberts. Development and differentiation of the intestinal epithelium.. Cellular and Molecular Life Sciences, 2003, 60 (7), pp.1322-32. ⟨10.1007/s00018-003-2289-3⟩. ⟨inserm-00287641⟩
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Catherine Florentz, Bénédicte Sohm, Petra Tryoen-Tóth, Joern Pütz, Marie Anne Sissler. Human mitochondrial tRNAs in health and disease. Cellular and Molecular Life Sciences, 2003, 60 (7), pp.1356-1375. ⟨10.1007/s00018-003-2343-1⟩. ⟨hal-02067468⟩
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Bruno Gingras, Geneviève Rodier, Edith Giasson, Philippe Coulombe, Catherine Chassagne, et al.. Expression of angiotensin type II receptor downregulates Cdk4 synthesis and inhibits cell-cycle progression. Oncogene, 2003, 22 (17), pp.2633-2642. ⟨10.1038/sj.onc.1206346⟩. ⟨hal-04274807⟩
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Bruno Gingras, Geneviève Rodier, Edith Giasson, Philippe Coulombe, Catherine Chassagne, et al.. Expression of angiotensin type II receptor downregulates Cdk4 synthesis and inhibits cell-cycle progression. Oncogene, 2003, 22 (17), pp.2633-2642. ⟨10.1038/sj.onc.1206346⟩. ⟨hal-03101794⟩
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Catherine Julien, Philippe Coulombe, Sylvain Meloche. Nuclear Export of ERK3 by a CRM1-dependent Mechanism Regulates Its Inhibitory Action on Cell Cycle Progression. Journal of Biological Chemistry, 2003, 278 (43), pp.42615-42624. ⟨10.1074/jbc.M302724200⟩. ⟨hal-03101852⟩
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Rosemary Kiernan, V. Bres, Raymond W. M. Ng, M. P. Coudart, S. El Messaoudi, et al.. Post-activation turn-off of NF-kappa B-dependent transcription is regulated by acetylation of p65. Journal of Biological Chemistry, 2003, 278 (4), pp.2758-2766. ⟨10.1074/jbc.M209572200⟩. ⟨hal-02239699⟩
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Marie-Paule Lefranc, Christelle Pommié, Manuel Ruiz, Véronique Giudicelli, Elodie Foulquier, et al.. IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains. Developmental and Comparative Immunology, 2003, 27 (1), pp.55-77. ⟨10.1016/s0145-305x(02)00039-3⟩. ⟨hal-04323490⟩
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Marie-Paule Lefranc, Véronique Giudicelli, Chantal Ginestoux, Denys Chaume. IMGT, the international ImMunoGeneTics information system, http://imgt.cines.fr: the reference in immunoinformatics.. Studies in Health Technology and Informatics, 2003, 95, pp.74-79. ⟨hal-04090231⟩
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Nicolas Nègre, Alain Ghysen, Anne Marie Martinez. Mitotic G2-arrest is required for neural cell fate determination in Drosophila.. Mechanisms of Development, 2003, 120 (2), pp.253-65. ⟨10.1016/s0925-4773(02)00419-7⟩. ⟨hal-00260367⟩
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Maryse Nicolaï, Christelle Lasbleiz, Jean-Maurice Dura. Gain-of-function screen identifies a role of the Src64 oncogene in Drosophila mushroom body development. Journal of Neurobiology, 2003, 57 (3), pp.291 - 302. ⟨10.1002/neu.10277⟩. ⟨hal-01930943⟩
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P. Pasero, K. Shimada, B. P. Duncker. Multiple roles of replication forks in S phase checkpoints: sensors, effectors and targets. Cell Cycle, 2003, 2 (6), pp.568--72. ⟨10.4161/cc.2.6.577⟩. ⟨hal-02199830⟩
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Walid Rachidi, Didier Vilette, Pascale Guiraud, Marie Arlotto, Jacqueline Riondel, et al.. Expression of prion protein increases cellular copper binding and antioxidant enzyme activities but not copper delivery. Journal of Biological Chemistry, 2003, 278 (11), pp.9064-9072. ⟨10.1074/jbc.M211830200⟩. ⟨hal-02682518⟩
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Stéphanie Robin, Séverine Chambeyron, Alain Bucheton, Isabelle Busseau. Gene Silencing Triggered by Non-LTR Retrotransposons in the Female Germline of Drosophila melanogaster. Genetics, 2003, 164 (2), pp.521-531. ⟨10.1093/genetics/164.2.521⟩. ⟨hal-04176743⟩
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P.J. Solano, B. Mugat, D. Martin, F. Girard, J.M. Huibant, et al.. Genome-wide identification of in vivo Drosophila Engrailed-binding DNA fragments and related target genes.. Development (Cambridge, England), 2003, 130, pp.1243-1254. ⟨10.1242/dev.00348⟩. ⟨hal-00311028⟩
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H. Tourriere, K. Chebli, L. Zekri, B. Courselaud, J. M. Blanchard, et al.. The RasGAP-associated endoribonuclease G3BP assembles stress granules. Journal of Cell Biology, 2003, 160 (6), pp.823--31. ⟨10.1083/jcb.200212128⟩. ⟨hal-02199834⟩
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Patric Turowski, Céline Franckhauser, May Morris, Philippe Vaglio, Anne Fernandez, et al.. Functional cdc25C Dual-Specificity Phosphatase Is Required for S-Phase Entry in Human Cells. Molecular Biology of the Cell, 2003, 14 (7), pp.2984-2998. ⟨10.1091/mbc.e02-08-0515⟩. ⟨hal-02441367⟩
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G. Versini, I. Comet, M. Wu, L. Hoopes, E. Schwob, et al.. The yeast Sgs1 helicase is differentially required for genomic and ribosomal DNA replication. EMBO Journal, 2003, 22 (8), pp.1939--49. ⟨10.1093/emboj/cdg180⟩. ⟨hal-02199835⟩
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2002

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Tal Anahory, Hervé Dechaud, René Bennes, Philippe Marin, Ned Lamb, et al.. Identification of new proteins in follicular fluid of mature human follicles. Electrophoresis, 2002, 23 (7-8), pp.1197-1202. ⟨10.1002/1522-2683(200204)23:7/8<1197::AID-ELPS1197>3.0.CO;2-2⟩. ⟨hal-03821158⟩
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Christine Berthier, Arnaud Monteil, Philippe Lory, Caroline Strube. α 1H mRNA in single skeletal muscle fibres accounts for T‐type calcium current transient expression during fetal development in mice. The Journal of Physiology, 2002, 539 (3), pp.681-691. ⟨10.1113/jphysiol.2001.013246⟩. ⟨hal-03093134⟩
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Noëlle Bons, Sylvain Lehmann, Noriyuki Nishida, Nadine Mestre-Francés, Dominique Dormont, et al.. BSE infection of the small short-lived primate Microcebus murinus.. Comptes Rendus. Biologies, 2002, 325 (1), pp.67-74. ⟨10.1016/s1631-0691(02)01390-2⟩. ⟨hal-01977733⟩
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Noëlle Bons, Sylvain Lehmann, Nadine Mestre-Francés, Dominique Dormont, Paul Brown. Brain and buffy coat transmission of bovine spongiform encephalopathy to the primate Microcebus murinus.. Transfusion, 2002, 42 (5), pp.513-6. ⟨10.1046/j.1537-2995.2002.00098.x⟩. ⟨hal-01977734⟩
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C Cayrou. Suppression of the Basic Transcription Element-Binding Protein in Brain Neuronal Cultures Inhibits Thyroid Hormone-Induced Neurite Branching. Endocrinology, 2002, 143 (6), pp.2242-2249. ⟨10.1210/en.143.6.2242⟩. ⟨hal-02154292⟩
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Séverine Chambeyron. Chimeric RNA transposition intermediates of the I factor produce precise retrotransposed copies. Nucleic Acids Research, 2002, 30 (15), pp.3387-3394. ⟨10.1093/nar/gkf456⟩. ⟨hal-04176758⟩
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Thierry Chardès, Nicolas Chapal, Damien Bresson, Cédric Bès, Véronique Giudicelli, et al.. The human anti-thyroid peroxidase autoantibody repertoire in Graves' and Hashimoto's autoimmune thyroid diseases. Immunogenetics, 2002, 54 (3), pp.141-157. ⟨10.1007/s00251-002-0453-9⟩. ⟨hal-04335106⟩
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Thierry Chardès, Nicolas Chapal, Damien Bresson, Cédric Bès, Véronique Giudicelli, et al.. The human anti-thyroid peroxidase autoantibody repertoire in Graves'and Hashimoto's autoimmune thyroid disease. Immunogenetics, 2002, 54 (3), pp.141-157. ⟨10.1007/s00251-002-0453-9⟩. ⟨hal-02677298⟩
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Thierry Cheutin, Marie-Françoise O'Donohue, Adrien Beorchia, Marc Vandelaer, Hervé H. Kaplan, et al.. Three-dimensional organization of active rRNA genes within the nucleolus.. Journal of Cell Science, 2002, 115 (Pt 16), pp.3297-307. ⟨10.1242/jcs.115.16.3297⟩. ⟨hal-02328313⟩
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Veronique Cornet, Delphine Bichet, Guillaume Sandoz, Isabelle Marty, Jacques Brocard, et al.. Multiple determinants in voltage-dependent P/Q calcium channels control their retention in the endoplasmic reticulum. European Journal of Neuroscience, 2002, 16 (5), pp.883-895. ⟨10.1046/j.1460-9568.2002.02168.x⟩. ⟨hal-02016550⟩
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Philippe Coulombe, Sylvain Meloche. Dual-tag prokaryotic vectors for enhanced expression of full-length recombinant proteins. Analytical Biochemistry, 2002, 310 (2), pp.219-222. ⟨10.1016/S0003-2697(02)00319-6⟩. ⟨hal-03101796⟩
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Nader Ezzeddine, Luc Paillard, Michèle Capri, Dominique Maniey, Thérèse Bassez, et al.. EDEN-dependent translational repression of maternal mRNAs is conserved between Xenopus and Drosophila.. Proceedings of the National Academy of Sciences of the United States of America, 2002, 99 (1), pp.257-62. ⟨10.1073/pnas.012555499⟩. ⟨inserm-00292951⟩
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Jérôme Follet, Catherine Lemaire-Vieille, Françoise Blanquet-Grossard, Valérie Podevin-Dimster, Sylvain Lehmann, et al.. PrP expression and replication by Schwann cells: implications in prion spreading.. Journal of Virology, 2002, 76 (5), pp.2434-9. ⟨10.1128/jvi.76.5.2434-2439.2002⟩. ⟨hal-00173320⟩
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Isabelle Gaillard, Sylvie Rouquier, Jean-Philippe Pin, Patrice Mollard, Sylvain Richard, et al.. A single olfactory receptor specifically binds a set of odorant molecules. European Journal of Neuroscience, 2002, 15 (3), pp.409-418. ⟨10.1046/j.0953-816x.2001.01871.x⟩. ⟨hal-02948481⟩
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Stephan Gasca, Joaquin Canizares, Pascal de Santa Barbara, Catherine Mejean, Francis Poulat, et al.. A nuclear export signal within the high mobility group domain regulates the nucleocytoplasmic translocation of SOX9 during sexual determination.. Proceedings of the National Academy of Sciences of the United States of America, 2002, 99, pp.11199-204. ⟨10.1073/pnas.172383099⟩. ⟨inserm-00130805⟩
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G. Gaudray, F. Gachon, J. Basbous, M. Biard-Piechaczyk, C. Devaux, et al.. The Complementary Strand of the Human T-Cell Leukemia Virus Type 1 RNA Genome Encodes a bZIP Transcription Factor That Down-Regulates Viral Transcription. Journal of Virology, 2002, 76 (24), pp.12813-12822. ⟨10.1128/jvi.76.24.12813-12822.2002⟩. ⟨hal-02376675⟩
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Aurélie Grienenberger, Benoit Miotto, Thierry Sagnier, Giacomo Cavalli, Vera Schramke, et al.. The MYST domain acetyltransferase Chameau functions in epigenetic mechanisms of transcriptional repression.. Current Biology, 2002, 12 (9), pp.762-6. ⟨10.1016/S0960-9822(02)00814-X⟩. ⟨inserm-02187762⟩
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Dalila D. Laoudj-Chenivesse, Philippe Marin, Rene Bennes, Emmanuel Tronel-Peyroz, François Leterrier. High performance two-dimensional gel electrophoresis using a wetting agent Tergitol® NP7. Proteomics, 2002, 2 (5), pp.481-485. ⟨10.1002/1615-9861(200205)2:5<481::AID-PROT481>3.0.CO;2-G⟩. ⟨hal-03821188⟩
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A. Lengronne, E. Schwob. The yeast CDK inhibitor Sic1 prevents genomic instability by promoting replication origin licensing in late G(1). Molecular Cell, 2002, 9 (5), pp.1067--78. ⟨10.1016/S1097-2765(02)00513-0⟩. ⟨hal-02197499⟩
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Julie Martel, C Cayrou, Jack Puymirat. Identification of new thyroid hormone-regulated genes in rat brain neuronal cultures. NeuroReport, 2002, 13 (15), pp.1849-1851. ⟨10.1097/00001756-200210280-00003⟩. ⟨hal-02154291⟩
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Valéry Matarazzo, Nicole Zsürger, Jean-Claude Guillemot, Olivier Clot-Faybesse, Jean-Marie Botto, et al.. Porcine odorant-binding protein selectively binds to a human olfactory receptor. Chemical Senses, 2002, 27 (8), pp.691-701. ⟨10.1093/chemse/27.8.691⟩. ⟨hal-00090872⟩
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P. Pasero, S. M. Gasser. In vitro DNA replication assays in yeast extracts. Methods in Enzymology, 2002, 351, pp.184--99. ⟨10.1016/S0076-6879(02)51848-6⟩. ⟨hal-02197507⟩
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Katell Peoc'H, Catherine Serres, Yveline Frobert, Caroline Martin, Sylvain Lehmann, et al.. The Human “Prion-like” Protein Doppel Is Expressed in Both Sertoli Cells and Spermatozoa. Journal of Biological Chemistry, 2002, 277 (45), pp.43071-43078. ⟨10.1074/jbc.M206357200⟩. ⟨hal-03908442⟩
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David Piquemal, Thérèse Commes, Laurent Manchon, Mireille Lejeune, Conchita Ferraz, et al.. Transcriptome Analysis of Monocytic Leukemia Cell Differentiation. Genomics, 2002, 80 (3), pp.361-371. ⟨10.1006/geno.2002.6836⟩. ⟨hal-02867269⟩
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S. Robin, S. Chambeyron, C. Brun, A. Bucheton, I. Busseau. Trans-complementation of an endonuclease-defective tagged I element as a tool for the study of retrotransposition in Drosophila melanogaster. Molecular Genetics and Genomics, 2002, 267 (6), pp.829-834. ⟨10.1007/s00438-002-0716-z⟩. ⟨hal-04176747⟩
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V. Sallet, C Thiandoume, J.F Rommeluere, A. Lusson, A Riviere, et al.. Some aspects of the MOCVD growth of ZnO on sapphire using tert-butanol. Materials Letters, 2002, 53 (1-2), pp.126-131. ⟨10.1016/S0167-577X(01)00558-4⟩. ⟨hal-02397872⟩
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H. Tourriere, K. Chebli, J. Tazi. mRNA degradation machines in eukaryotic cells. Biochimie, 2002, 84 (8), pp.821--37. ⟨10.1016/s0300-9084(02)01445-1⟩. ⟨hal-02197511⟩
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2001

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K. Brodolin, Malcolm Buckle. Differential melting of the transcription start site associated with changes in RNA polymerase-promoter contacts in initiating transcription complexes.. Journal of Molecular Biology, 2001, 307 (1), pp.25-30. ⟨10.1006/jmbi.2000.4483⟩. ⟨hal-00277547⟩
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Frédéric Crémazy, Philippe Berta, Franck Girard. Genome-wide analysis of Sox genes in Drosophila melanogaster. Mechanisms of Development, 2001, 109 (2), pp.371-375. ⟨10.1016/s0925-4773(01)00529-9⟩. ⟨hal-04526708⟩
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G. Deschenes, S. Gonin, E Zolty, L. Cheval, M. Rousselot, et al.. Increased synthesis and avp unresponsiveness of Na,K-ATPase in collecting duct from nephrotic rats.. Journal of the American Society of Nephrology, 2001, 12 (11), pp.2241-52. ⟨10.1681/ASN.V12112241⟩. ⟨hal-03161064⟩
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M. Faucheux, Sophie Netter, S. Bloyer, M. Moussa, E. Boissonneau, et al.. Advantages of a P-element construct containing MtnA sequences for the identification of patterning and cell determination genes in Drosophila melanogaster. Molecular Genetics and Genomics, 2001, 265 (1), pp.14-22. ⟨10.1007/s004380000391⟩. ⟨hal-04695863⟩
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M. O. Fauvarque, P. Laurenti, A. Boivin, S. Bloyer, R. Griffin-Shea, et al.. Dominant modifiers of the polyhomeotic extra-sex-combs phenotype induced by marked P element insertional mutagenesis in Drosophila.. Genetical Research, 2001, 78 (2), pp.137-48. ⟨10.1017/s0016672301005274⟩. ⟨hal-00414702⟩
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Franck Girard, Frédéric Crémazy, Philippe Berta, Armand Renucci. Expression pattern of the Sox31 gene during Zebrafish embryonic development. Mechanisms of Development, 2001, 100 (1), pp.71-73. ⟨10.1016/s0925-4773(00)00491-3⟩. ⟨hal-04526701⟩
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Marie-Paule Lefranc. IMGT, the international ImMunoGeneTics database. Nucleic Acids Research, 2001, 29 (1), pp.207-209. ⟨10.1093/nar/29.1.207⟩. ⟨hal-04090173⟩
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A. Lengronne, P. Pasero, A. Bensimon, E. Schwob. Monitoring S phase progression globally and locally using BrdU incorporation in TK(+) yeast strains. Nucleic Acids Research, 2001, 29 (7), pp.1433--42. ⟨10.1093/nar/29.7.1433⟩. ⟨hal-02197308⟩
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C Millet, P Lemaire, B Orsetti, P Guglielmi, V François. The human chordin gene encodes several differentially expressed spliced variants with distinct BMP opposing activities. Mechanisms of Development, 2001, 106 (1-2), pp.85-96. ⟨10.1016/S0925-4773(01)00423-3⟩. ⟨hal-01441426⟩
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S-A. Said-Hassani, R. Triboulet, Pierre Bigenwald, B. Gil, A. Lusson, et al.. Strain-Fields effects and reversal of the nature of the fundamental valence band of ZnO epilayers.. Japanese Journal of Applied Physics, 2001, pp.L1095. ⟨10.1143/JJAP.40.L1089⟩. ⟨hal-00272501⟩
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H. Tourriere, I. E. Gallouzi, K. Chebli, J. P. Capony, J. Mouaikel, et al.. RasGAP-associated endoribonuclease G3Bp: selective RNA degradation and phosphorylation-dependent localization. Molecular and Cellular Biology, 2001, 21 (22), pp.7747--60. ⟨10.1128/MCB.21.22.7747-7760.2001⟩. ⟨hal-02197316⟩
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Didier Vilette, Olivier Andréoletti, M.F. Madelaine, Jean-Luc Vilotte, S. Lehmann, et al.. Ex vivo propagation of infectious sheep scrapie agent in heterologous epithelial cells expressing ovine prion protein. Proceedings of the National Academy of Sciences of the United States of America, 2001, 98 (7), pp.4055-4059. ⟨10.1073/pnas.061337998⟩. ⟨hal-02680606⟩
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Journal articles

2000

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Gilles Carnac, L. Fajas, A. L'Honore, C. Sardet, N. J. C. Lamb, et al.. The retinoblastoma-like protein p130 is involved in the determination of reserve-cells in differentiating myoblasts. Current Biology, 2000, 10 (9), pp.543--546. ⟨10.1016/S0960-9822(00)00471-1⟩. ⟨hal-02196840⟩
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Frédéric Crémazy, Philippe Berta, Franck Girard. Sox Neuro , a new Drosophila Sox gene expressed in the developing central nervous system. Mechanisms of Development, 2000, 93 (1-2), pp.215-219. ⟨10.1016/s0925-4773(00)00268-9⟩. ⟨hal-04526691⟩
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Amandine Hurbin, H. Orcel, C. Ferraz, F. Moos, A. Rabié. Expression of the Genes Encoding the Vasopressin-Activated Calcium-Mobilizing Receptor and the Dual Angiotensin II/Vasopressin Receptor in the Rat Central Nervous System. Journal of Neuroendocrinology, 2000, 12 (7), pp.677-684. ⟨10.1046/j.1365-2826.2000.00499.x⟩. ⟨hal-02349495⟩
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V Lacronique, A. Boureux, R Monni, S Dumon, M Mauchauffé, et al.. Transforming properties of chimeric TEL-JAK proteins in Ba/F3 cells.. Blood, 2000, 95 (6), pp.2076-2083. ⟨10.1182/blood.V95.6.2076⟩. ⟨hal-02427379⟩
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P. Pasero, E. Schwob. Think global, act local--how to regulate S phase from individual replication origins. Current Opinion in Genetics and Development, 2000, 10 (2), pp.178--86. ⟨10.1016/s0959-437x(00)00067-8⟩. ⟨hal-02196827⟩
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J. Polanowska, L. Le Cam, B. Orsetti, H. Valles, E. Fabbrizio, et al.. Human E2F5 gene is oncogenic in primary rodent cells and is amplified in human breast tumors. Genes, Chromosomes & Cancer, 2000, 28 (1), pp.126--130. ⟨10.1002/(SICI)1098-2264(200005)28:1<126::AID-GCC15>3.0.CO;2-G⟩. ⟨hal-02196851⟩
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Manuel Ruiz, Véronique Giudicelli, Chantal Ginestoux, Peter Stoehr, James Robinson, et al.. IMGT, the international ImMunoGeneTics database. Nucleic Acids Research, 2000, 28 (1), pp.219-221. ⟨10.1093/nar/28.1.219⟩. ⟨hal-04090078⟩
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Marc Servant, Philippe Coulombe, Benjamin Turgeon, Sylvain Meloche. Differential Regulation of P27Kip1 Expression by Mitogenic and Hypertrophic Factors. Journal of Cell Biology, 2000, 148 (3), pp.543-556. ⟨10.1083/jcb.148.3.543⟩. ⟨hal-03101882⟩
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Marc Thiry, Thierry Cheutin, Marie-Françoise O'Donohue, Hervé H. Kaplan, Dominique Ploton. Dynamics and three-dimensional localization of ribosomal RNA within the nucleolus. RNA, 2000, 6 (12), pp.1750-1761. ⟨10.1017/s1355838200001564⟩. ⟨hal-02328327⟩
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Journal articles

1999

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H Debrauwère, J Buard, J Tessier, D Aubert, Gilles Vergnaud, et al.. Meiotic instability of human minisatellite CEB1 in yeast requires DNA double-strand breaks.. Nature Genetics, 1999, 23 (3), pp.367-71. ⟨10.1038/15557⟩. ⟨hal-01159817⟩
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M. Ganapathi, B. P. Patel, O. Polit, M. Touratier. A c1 finite element including transverse shear and torsion warping for rectangular sandwich beams. International Journal for Numerical Methods in Engineering, 1999, 45 (1), pp.47-75. ⟨10.1002/(SICI)1097-0207(19990510)45:1<47::AID-NME578>3.0.CO;2-B⟩. ⟨hal-01366945⟩
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M. Ganapathi, B. P. Patel, P. Boisse, O. Polit. Flexural loss factors of sandwich and laminated composite beams using linear and nonlinear dynamic analysis. Composites Part B: Engineering, 1999, 30 (3), pp.245-256. ⟨10.1016/S1359-8368(98)00063-8⟩. ⟨hal-01366944⟩
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Véronique Giudicelli, Marie-Paule Lefranc. Ontology for immunogenetics: the IMGT-ONTOLOGY. Bioinformatics, 1999, 15 (12), pp.1047-1054. ⟨10.1093/bioinformatics/15.12.1047⟩. ⟨hal-04321368⟩
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Jean-Pierre Hardelin, A Julliard, B Moniot, Nadia Soussi-Yanicostas, C Verney, et al.. Anosmin-1 is a regionally restricted component of basement membranes and interstitial matrices during organogenesis: implications for the developmental anomalies of X chromosome-linked Kallmann syndrome.. Developmental Dynamics, 1999, 215 (1), pp.26-44. ⟨pasteur-05025252⟩
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Marie-Paule Lefranc, Véronique Giudicelli, Chantal Ginestoux, Julia Bodmer, Werner Müller, et al.. IMGT, the international ImMunoGeneTics database. Nucleic Acids Research, 1999, 27 (1), pp.209-212. ⟨10.1093/nar/27.1.209⟩. ⟨hal-04090021⟩
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B. Virlon, L. Cheval, J.-M. Buhler, E. Billon, A. Doucet, et al.. Serial microanalysis of renal transcriptomes. Proceedings of the National Academy of Sciences of the United States of America, 1999, 96 (26), pp.15286-15291. ⟨10.1073/pnas.96.26.15286⟩. ⟨hal-03161085⟩
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Journal articles

1998

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V Amarger, D Gauguier, Martine M. Yerle, F Apiou, P Pinton, et al.. Analysis of distribution in the human, pig, and rat genomes points toward a general subtelomeric origin of minisatellite structures.. Genomics, 1998, 52 (1), pp.62-71. ⟨10.1006/geno.1998.5365⟩. ⟨hal-01160637⟩
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B Buffin-Meyer, J. Verbavatz, L. Cheval, S Marsy, M Younes-Ibrahim, et al.. Regulation of Na+, K(+)-ATPase in the rat outer medullary collecting duct during potassium depletion.. Journal of the American Society of Nephrology, 1998, 9 (4), pp.538-50. ⟨10.1681/ASN.V94538⟩. ⟨hal-03161076⟩
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Frederic Cremazy, Stephan Soullier, Philippe Berta, Philippe Jay. Further complexity of the human SOX gene family revealed by the combined use of highly degenerate primers and nested PCR. FEBS Letters, 1998, 438 (3), pp.311-314. ⟨10.1016/s0014-5793(98)01294-0⟩. ⟨hal-04526686⟩
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Véronique Giudicelli, Denys Chaume, Gerard Menessier, Hans-Helmar Althaus, Werner Müller, et al.. IMGT, the international ImMunoGeneTics database: a new design for immunogenetics data access.. Studies in Health Technology and Informatics, 1998, 52 (1), pp.351-355. ⟨hal-04087389⟩
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Véronique Giudicelli, Denys Chaume, Marie-Paule Lefranc. IMGT/LIGM-DB: a systematized approach for ImMunoGeneTics database coherence and data distribution improvement. Proceedings / .. International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology., 1998, 6, pp.59-68. ⟨hal-02195848⟩
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Christophe Klein, Thierry Cheutin, Lawrence Rothblum, Hervé H. Kaplan, Adrien Beorchia, et al.. The Three-dimensional Study of Chromosomes and Upstream Binding Factor-immunolabeled Nucleolar Organizer Regions Demonstrates Their Nonrandom Spatial Arrangement during Mitosis. Molecular Biology of the Cell, 1998, 9 (11), pp.3147-3159. ⟨10.1091/mbc.9.11.3147⟩. ⟨hal-02328359⟩
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Marie-Paule Lefranc, Véronique Giudicelli, Chantal Busin, Julia Bodmer, Werner Müller, et al.. IMGT, the international ImMunoGeneTics database. Nucleic Acids Research, 1998, 26 (1), pp.297-303. ⟨10.1093/nar/26.1.297⟩. ⟨hal-04087310⟩
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M.F. O'Donohue, T. Cheutin, C. Klein, H. Kaplan, D. Ploton. Mounting Technique Allows Observation of Immuno-Labeled Cells on Plastic Coverslips. Biotechniques, 1998, 24 (6), pp.910-914. ⟨10.2144/98246bm01⟩. ⟨hal-02328366⟩
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Nathalie Pallarès, Jean-Pol Frippiat, Véronique Giudicelli, Marie-Paule Lefranc. The human immunoglobulin lambda variable (IGLV) genes and joining (IGLJ) segments. Experimental and Clinical Immunogenetics, 1998, 15 (1), pp.8--18. ⟨10.1159/000019054⟩. ⟨hal-02196865⟩
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C. Pasquier, C Cayrou, A. Blancher, C. Tourne-Petheil, A. Berrebi, et al.. Molecular Evidence for Mother-to-Child Transmission of Multiple Variants by Analysis of RNA and DNA Sequences of Human Immunodeficiency Virus Type 1. Journal of Virology, 1998, 72 (11), pp.8493-8501. ⟨10.1128/JVI.72.11.8493-8501.1998⟩. ⟨hal-02154295⟩
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